RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 ACSS2Q9NR19 701 aa15.37■□□□□ 0.05
TIMP3-201ENST00000266085 ADAMTS5Q9UNA0 930 aa15.37■□□□□ 0.05
TIMP3-201ENST00000266085 MYRFQ9Y2G1 1151 aa15.37■□□□□ 0.05
TIMP3-201ENST00000266085 PLIN3O60664 434 aa15.37■□□□□ 0.05
TIMP3-201ENST00000266085 PSMB9P28065 219 aa15.37■□□□□ 0.05
TIMP3-201ENST00000266085 GUCA1AP43080 201 aaPredicted RBP15.37■□□□□ 0.05
TIMP3-201ENST00000266085 CAP1Q01518 475 aa15.37■□□□□ 0.05
TIMP3-201ENST00000266085 CACNG1Q06432 222 aa15.37■□□□□ 0.05
TIMP3-201ENST00000266085 ELP6Q0PNE2 266 aa15.37■□□□□ 0.05
TIMP3-201ENST00000266085 NRF1Q16656 503 aa15.37■□□□□ 0.05
TIMP3-201ENST00000266085 DCAF12L1Q5VU92 463 aa15.37■□□□□ 0.05
TIMP3-201ENST00000266085 TCF12Q99081 682 aa15.37■□□□□ 0.05
TIMP3-201ENST00000266085 ABCB8Q9NUT2 735 aa15.37■□□□□ 0.05
TIMP3-201ENST00000266085 PRPF19Q9UMS4 504 aaKnown RBP15.37■□□□□ 0.05
TIMP3-201ENST00000266085 RPL26L1Q9UNX3 145 aaKnown RBP15.37■□□□□ 0.05
TIMP3-201ENST00000266085 SLC7A4O43246 635 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 NOS3P29474 1203 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 DGKGP49619 791 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 MLLT6P55198 1093 aaPredicted RBP15.36■□□□□ 0.05
TIMP3-201ENST00000266085 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.36■□□□□ 0.05
TIMP3-201ENST00000266085 GPR17Q13304 367 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 GNA13Q14344 377 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 EFCAB3Q8N7B9 438 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 WDR48Q8TAF3 677 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 BRSK1Q8TDC3 778 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 SPOCK2Q92563 424 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 PANX1Q96RD7 426 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 RIBC2Q9H4K1 309 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 SSU72Q9NP77 194 aaKnown RBP15.36■□□□□ 0.05
TIMP3-201ENST00000266085 IMP3Q9NV31 184 aaKnown RBP15.36■□□□□ 0.05
TIMP3-201ENST00000266085 AGPSO00116 658 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 PIRO00625 290 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 PSMD8P48556 350 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 KCNQ1P51787 676 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 SLC20A2Q08357 652 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 ARL13AQ5H913 290 aaPredicted RBP15.36■□□□□ 0.05
TIMP3-201ENST00000266085 COLGALT2Q8IYK4 626 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 FLCNQ8NFG4 579 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 TLCD1Q96CP7 247 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 FEM1CQ96JP0 617 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 PHPT1Q9NRX4 125 aaPredicted RBP15.36■□□□□ 0.05
TIMP3-201ENST00000266085 CORO1CQ9ULV4 474 aaPredicted RBP15.36■□□□□ 0.05
TIMP3-201ENST00000266085 SLC27A6Q9Y2P4 619 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 COL2A1P02458 1487 aaPredicted RBP15.36■□□□□ 0.05
TIMP3-201ENST00000266085 KELP23276 732 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 EPS8Q12929 822 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 DENND6AQ8IWF6 608 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 FBXW8Q8N3Y1 598 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 TERB1Q8NA31 727 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 SLCO2A1Q92959 643 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 HEPHQ9BQS7 1158 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 TMEM175Q9BSA9 504 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 OSBPL2Q9H1P3 480 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 CRTAC1Q9NQ79 661 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 CLIC5Q9NZA1 410 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 NPEPPSL1A6NEC2 478 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 H3BM21 787 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 STK16O75716 305 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 SLC22A3O75751 556 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 SERPINI2O75830 405 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 MRPS15P82914 257 aaKnown RBP15.36■□□□□ 0.05
TIMP3-201ENST00000266085 DLG2Q15700 870 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 METTL21CQ5VZV1 264 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 IRGCQ6NXR0 463 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 ZDHHC24Q6UX98 284 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 ULK2Q8IYT8 1036 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 AZIN2Q96A70 460 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 WRAP53Q9BUR4 548 aaKnown RBP15.36■□□□□ 0.05
TIMP3-201ENST00000266085 OSBPL6Q9BZF3 934 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 RNF186Q9NXI6 227 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 FKBPLQ9UIM3 349 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 RPS6KA6Q9UK32 745 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 TPRKBQ9Y3C4 175 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 TLL2Q9Y6L7 1015 aa15.36■□□□□ 0.05
TIMP3-201ENST00000266085 PTGES3LE9PB15 166 aa15.35■□□□□ 0.05
TIMP3-201ENST00000266085 NRP2O60462 931 aa15.35■□□□□ 0.05
TIMP3-201ENST00000266085 FAM20BO75063 409 aa15.35■□□□□ 0.05
TIMP3-201ENST00000266085 KRT36O76013 467 aa15.35■□□□□ 0.05
TIMP3-201ENST00000266085 CNPP09543 421 aaKnown RBP15.35■□□□□ 0.05
TIMP3-201ENST00000266085 ATP6V1C1P21283 382 aa15.35■□□□□ 0.05
TIMP3-201ENST00000266085 SLC7A2P52569 658 aa15.35■□□□□ 0.05
TIMP3-201ENST00000266085 BNIP2Q12982 314 aa15.35■□□□□ 0.05
TIMP3-201ENST00000266085 KLF10Q13118 480 aa15.35■□□□□ 0.05
TIMP3-201ENST00000266085 GPM6BQ13491 265 aa15.35■□□□□ 0.05
TIMP3-201ENST00000266085 ZNF280BQ86YH2 543 aa15.35■□□□□ 0.05
TIMP3-201ENST00000266085 MAGEE2Q8TD90 523 aaPredicted RBP15.35■□□□□ 0.05
TIMP3-201ENST00000266085 NMD3Q96D46 503 aaKnown RBP15.35■□□□□ 0.05
TIMP3-201ENST00000266085 FIZ1Q96SL8 496 aa15.35■□□□□ 0.05
TIMP3-201ENST00000266085 H0Y858 1186 aa15.35■□□□□ 0.05
TIMP3-201ENST00000266085 EPORP19235 508 aa15.35■□□□□ 0.05
TIMP3-201ENST00000266085 FGFR3P22607 806 aa15.35■□□□□ 0.05
TIMP3-201ENST00000266085 SOX6P35712 828 aa15.35■□□□□ 0.05
TIMP3-201ENST00000266085 BHLHB9Q6PI77 547 aa15.35■□□□□ 0.05
TIMP3-201ENST00000266085 AGMOQ6ZNB7 445 aa15.35■□□□□ 0.05
TIMP3-201ENST00000266085 OR52E6Q96RD3 313 aa15.35■□□□□ 0.05
TIMP3-201ENST00000266085 FCRL5Q96RD9 977 aa15.35■□□□□ 0.05
TIMP3-201ENST00000266085 RFXANKO14593 260 aa15.35■□□□□ 0.05
TIMP3-201ENST00000266085 ATG13O75143 517 aa15.35■□□□□ 0.05
TIMP3-201ENST00000266085 GATMP50440 423 aa15.35■□□□□ 0.05
TIMP3-201ENST00000266085 PPIDQ08752 370 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms