RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 PCSK4Q6UW60 755 aa9.69□□□□□ -0.86
VPS41-201ENST00000265745 ADAMTSL4Q6UY14 1074 aa9.69□□□□□ -0.86
VPS41-201ENST00000265745 ZNF765Q7L2R6 523 aa9.69□□□□□ -0.86
VPS41-201ENST00000265745 SPRED1Q7Z699 444 aa9.69□□□□□ -0.86
VPS41-201ENST00000265745 NRSN1Q8IZ57 195 aa9.69□□□□□ -0.86
VPS41-201ENST00000265745 FBXO39Q8N4B4 442 aa9.69□□□□□ -0.86
VPS41-201ENST00000265745 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.69□□□□□ -0.86
VPS41-201ENST00000265745 SLC35G2Q8TBE7 412 aa9.69□□□□□ -0.86
VPS41-201ENST00000265745 KIAA1524Q8TCG1 905 aa9.69□□□□□ -0.86
VPS41-201ENST00000265745 ZDHHC1Q8WTX9 485 aa9.69□□□□□ -0.86
VPS41-201ENST00000265745 SNRNP27Q8WVK2 155 aaKnown RBP9.69□□□□□ -0.86
VPS41-201ENST00000265745 AP2M1Q96CW1 435 aa9.69□□□□□ -0.86
VPS41-201ENST00000265745 RNF157Q96PX1 679 aa9.69□□□□□ -0.86
VPS41-201ENST00000265745 TDRD1Q9BXT4 1180 aaKnown RBP9.69□□□□□ -0.86
VPS41-201ENST00000265745 GSDMCQ9BYG8 508 aa9.69□□□□□ -0.86
VPS41-201ENST00000265745 STRADBQ9C0K7 418 aa9.69□□□□□ -0.86
VPS41-201ENST00000265745 CPNE5Q9HCH3 593 aa9.69□□□□□ -0.86
VPS41-201ENST00000265745 EPB41L5Q9HCM4 733 aa9.69□□□□□ -0.86
VPS41-201ENST00000265745 GOLGA6AQ9NYA3 693 aa9.69□□□□□ -0.86
VPS41-201ENST00000265745 DTLQ9NZJ0 730 aa9.69□□□□□ -0.86
VPS41-201ENST00000265745 TAAR2Q9P1P5 351 aa9.69□□□□□ -0.86
VPS41-201ENST00000265745 ATXN7L1Q9ULK2 861 aaPredicted RBP9.69□□□□□ -0.86
VPS41-201ENST00000265745 RPL26L1Q9UNX3 145 aaKnown RBP9.69□□□□□ -0.86
VPS41-201ENST00000265745 CHKBQ9Y259 395 aa9.69□□□□□ -0.86
VPS41-201ENST00000265745 PCDHGA7Q9Y5G6 932 aa9.69□□□□□ -0.86
VPS41-201ENST00000265745 BAHCC1Q9P281 2608 aa9.69□□□□□ -0.86
VPS41-201ENST00000265745 CAPN8A6NHC0 703 aa9.68□□□□□ -0.86
VPS41-201ENST00000265745 C3orf70A6NLC5 250 aaPredicted RBP9.68□□□□□ -0.86
VPS41-201ENST00000265745 CBFA2T2O43439 604 aa9.68□□□□□ -0.86
VPS41-201ENST00000265745 AKR1B10O60218 316 aa9.68□□□□□ -0.86
VPS41-201ENST00000265745 JCHAINP01591 159 aa9.68□□□□□ -0.86
VPS41-201ENST00000265745 PRB1P04280 392 aa9.68□□□□□ -0.86
VPS41-201ENST00000265745 HLA-DQB2P05538 268 aa9.68□□□□□ -0.86
VPS41-201ENST00000265745 HGFP14210 728 aa9.68□□□□□ -0.86
VPS41-201ENST00000265745 AK4P27144 223 aaPredicted RBP9.68□□□□□ -0.86
VPS41-201ENST00000265745 SLC5A2P31639 672 aa9.68□□□□□ -0.86
VPS41-201ENST00000265745 ADCY8P40145 1251 aa9.68□□□□□ -0.86
VPS41-201ENST00000265745 ARHGAP25P42331 645 aa9.68□□□□□ -0.86
VPS41-201ENST00000265745 EPHB1P54762 984 aa9.68□□□□□ -0.86
VPS41-201ENST00000265745 MAZP56270 477 aaKnown RBP9.68□□□□□ -0.86
VPS41-201ENST00000265745 CTBSQ01459 385 aa9.68□□□□□ -0.86
VPS41-201ENST00000265745 CLN3Q13286 438 aa9.68□□□□□ -0.86
VPS41-201ENST00000265745 TRIM14Q14142 442 aa9.68□□□□□ -0.86
VPS41-201ENST00000265745 MESDQ14696 234 aa9.68□□□□□ -0.86
VPS41-201ENST00000265745 SKOR2Q2VWA4 1001 aaPredicted RBP9.68□□□□□ -0.86
VPS41-201ENST00000265745 ARHGAP40Q5TG30 622 aa9.68□□□□□ -0.86
VPS41-201ENST00000265745 TMPRSS9Q7Z410 1059 aa9.68□□□□□ -0.86
VPS41-201ENST00000265745 ZNF438Q7Z4V0 828 aa9.68□□□□□ -0.86
VPS41-201ENST00000265745 VSTM4Q8IW00 320 aa9.68□□□□□ -0.86
VPS41-201ENST00000265745 RAVER1Q8IY67 606 aaKnown RBP9.68□□□□□ -0.86
VPS41-201ENST00000265745 CCDC13Q8IYE1 715 aa9.68□□□□□ -0.86
VPS41-201ENST00000265745 PLD5Q8N7P1 536 aa9.68□□□□□ -0.86
VPS41-201ENST00000265745 CNTD1Q8N815 330 aa9.68□□□□□ -0.86
VPS41-201ENST00000265745 CCNYQ8ND76 341 aa9.68□□□□□ -0.86
VPS41-201ENST00000265745 EXD1Q8NHP7 514 aa9.68□□□□□ -0.86
VPS41-201ENST00000265745 TMEM159Q96B96 161 aa9.68□□□□□ -0.86
VPS41-201ENST00000265745 HDAC11Q96DB2 347 aa9.68□□□□□ -0.86
VPS41-201ENST00000265745 LYSMD1Q96S90 227 aa9.68□□□□□ -0.86
VPS41-201ENST00000265745 AGAP2Q99490 1192 aa9.68□□□□□ -0.86
VPS41-201ENST00000265745 CHP1Q99653 195 aa9.68□□□□□ -0.86
VPS41-201ENST00000265745 RIOK2Q9BVS4 552 aaKnown RBP9.68□□□□□ -0.86
VPS41-201ENST00000265745 DEF6Q9H4E7 631 aa9.68□□□□□ -0.86
VPS41-201ENST00000265745 SUDS3Q9H7L9 328 aaPredicted RBP9.68□□□□□ -0.86
VPS41-201ENST00000265745 ABHD10Q9NUJ1 306 aa9.68□□□□□ -0.86
VPS41-201ENST00000265745 HAUS2Q9NVX0 235 aa9.68□□□□□ -0.86
VPS41-201ENST00000265745 ZNHIT6Q9NWK9 470 aaKnown RBP9.68□□□□□ -0.86
VPS41-201ENST00000265745 CD84Q9UIB8 345 aa9.68□□□□□ -0.86
VPS41-201ENST00000265745 TMEM98Q9Y2Y6 226 aa9.68□□□□□ -0.86
VPS41-201ENST00000265745 TTLL3Q9Y4R7 772 aa9.68□□□□□ -0.86
VPS41-201ENST00000265745 TDRD6O60522 2096 aaKnown RBP9.67□□□□□ -0.86
VPS41-201ENST00000265745 LRRD1A4D1F6 860 aa9.67□□□□□ -0.86
VPS41-201ENST00000265745 RHPN2P1A8MT19 583 aa9.67□□□□□ -0.86
VPS41-201ENST00000265745 ZNF487B1APH4 448 aa9.67□□□□□ -0.86
VPS41-201ENST00000265745 KCNK1O00180 336 aa9.67□□□□□ -0.86
VPS41-201ENST00000265745 NVLO15381 856 aaKnown RBP9.67□□□□□ -0.86
VPS41-201ENST00000265745 C1QL1O75973 258 aa9.67□□□□□ -0.86
VPS41-201ENST00000265745 MTA2O94776 668 aa9.67□□□□□ -0.86
VPS41-201ENST00000265745 CLDN7O95471 211 aa9.67□□□□□ -0.86
VPS41-201ENST00000265745 ECEL1O95672 775 aa9.67□□□□□ -0.86
VPS41-201ENST00000265745 PYGLP06737 847 aa9.67□□□□□ -0.86
VPS41-201ENST00000265745 MMP2P08253 660 aa9.67□□□□□ -0.86
VPS41-201ENST00000265745 CA4P22748 312 aa9.67□□□□□ -0.86
VPS41-201ENST00000265745 CD1CP29017 333 aa9.67□□□□□ -0.86
VPS41-201ENST00000265745 ALDH4A1P30038 563 aa9.67□□□□□ -0.86
VPS41-201ENST00000265745 GPR3P46089 330 aa9.67□□□□□ -0.86
VPS41-201ENST00000265745 OR1D5P58170 312 aa9.67□□□□□ -0.86
VPS41-201ENST00000265745 IFI35P80217 286 aaPredicted RBP9.67□□□□□ -0.86
VPS41-201ENST00000265745 RHDQ02161 417 aa9.67□□□□□ -0.86
VPS41-201ENST00000265745 PPIDQ08752 370 aaKnown RBP9.67□□□□□ -0.86
VPS41-201ENST00000265745 PEX6Q13608 980 aa9.67□□□□□ -0.86
VPS41-201ENST00000265745 NR1D2Q14995 579 aa9.67□□□□□ -0.86
VPS41-201ENST00000265745 PYCR3Q53H96 274 aa9.67□□□□□ -0.86
VPS41-201ENST00000265745 ZFYVE27Q5T4F4 411 aa9.67□□□□□ -0.86
VPS41-201ENST00000265745 LRRC38Q5VT99 294 aa9.67□□□□□ -0.86
VPS41-201ENST00000265745 SLC9A4Q6AI14 798 aa9.67□□□□□ -0.86
VPS41-201ENST00000265745 DOK6Q6PKX4 331 aa9.67□□□□□ -0.86
VPS41-201ENST00000265745 SLC30A9Q6PML9 568 aa9.67□□□□□ -0.86
VPS41-201ENST00000265745 USP53Q70EK8 1073 aa9.67□□□□□ -0.86
VPS41-201ENST00000265745 VSIG1Q86XK7 387 aa9.67□□□□□ -0.86
VPS41-201ENST00000265745 SLITRK4Q8IW52 837 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms