RNA–Protein interactions for RNA: ENST00000265641.9

CPT1A-201, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPT1A, Length 5,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-201ENST00000265641 CPT1BQ92523 772 aa10.67□□□□□ -0.7
CPT1A-201ENST00000265641 SLC45A3Q96JT2 553 aa10.67□□□□□ -0.7
CPT1A-201ENST00000265641 APBA2Q99767 749 aa10.67□□□□□ -0.7
CPT1A-201ENST00000265641 YIPF2Q9BWQ6 316 aa10.67□□□□□ -0.7
CPT1A-201ENST00000265641 DPAGT1Q9H3H5 408 aa10.67□□□□□ -0.7
CPT1A-201ENST00000265641 PDGFCQ9NRA1 345 aa10.67□□□□□ -0.7
CPT1A-201ENST00000265641 ZSCAN32Q9NX65 697 aa10.67□□□□□ -0.7
CPT1A-201ENST00000265641 MKS1Q9NXB0 559 aa10.67□□□□□ -0.7
CPT1A-201ENST00000265641 TMEM98Q9Y2Y6 226 aa10.67□□□□□ -0.7
CPT1A-201ENST00000265641 MAGED1Q9Y5V3 778 aaPredicted RBP10.67□□□□□ -0.7
CPT1A-201ENST00000265641 SH3D21A4FU49 640 aa10.67□□□□□ -0.7
CPT1A-201ENST00000265641 TGFB1I1O43294 461 aa10.67□□□□□ -0.7
CPT1A-201ENST00000265641 TRUB2O95900 331 aaKnown RBP10.67□□□□□ -0.7
CPT1A-201ENST00000265641 HMGCRP04035 888 aa10.67□□□□□ -0.7
CPT1A-201ENST00000265641 SLC2A2P11168 524 aaPredicted RBP10.67□□□□□ -0.7
CPT1A-201ENST00000265641 DCDC1P59894 354 aa10.67□□□□□ -0.7
CPT1A-201ENST00000265641 S100A12P80511 92 aa10.67□□□□□ -0.7
CPT1A-201ENST00000265641 MGAT5BQ3V5L5 792 aa10.67□□□□□ -0.7
CPT1A-201ENST00000265641 SULT1C3Q6IMI6 304 aa10.67□□□□□ -0.7
CPT1A-201ENST00000265641 AHSA2Q719I0 299 aa10.67□□□□□ -0.7
CPT1A-201ENST00000265641 SPARTQ8N0X7 666 aa10.67□□□□□ -0.7
CPT1A-201ENST00000265641 CYP2W1Q8TAV3 490 aa10.67□□□□□ -0.7
CPT1A-201ENST00000265641 REPS1Q96D71 796 aa10.67□□□□□ -0.7
CPT1A-201ENST00000265641 APOL5Q9BWW9 433 aa10.67□□□□□ -0.7
CPT1A-201ENST00000265641 ACTR3BQ9P1U1 418 aa10.67□□□□□ -0.7
CPT1A-201ENST00000265641 XPR1Q9UBH6 696 aa10.67□□□□□ -0.7
CPT1A-201ENST00000265641 TESMINQ9Y4I5 508 aa10.67□□□□□ -0.7
CPT1A-201ENST00000265641 NR2E3Q9Y5X4 410 aa10.67□□□□□ -0.7
CPT1A-201ENST00000265641 ATRNO75882 1429 aa10.67□□□□□ -0.7
CPT1A-201ENST00000265641 BNIP3LO60238 219 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 KLRK1P26718 216 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 MSX2P35548 267 aaPredicted RBP10.66□□□□□ -0.7
CPT1A-201ENST00000265641 ETV1P50549 477 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 POU5F1Q01860 360 aaKnown RBP10.66□□□□□ -0.7
CPT1A-201ENST00000265641 NOMO1Q15155 1222 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 TCEAL1Q15170 157 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 NFE2Q16621 373 aaPredicted RBP10.66□□□□□ -0.7
CPT1A-201ENST00000265641 ZRANB3Q5FWF4 1079 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 PGBD2Q6P3X8 592 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 VGLL2Q8N8G2 317 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 PTCD2Q8WV60 388 aaKnown RBP10.66□□□□□ -0.7
CPT1A-201ENST00000265641 STON2Q8WXE9 905 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 SPATA5L1Q9BVQ7 753 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 ARMC7Q9H6L4 198 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 TAS2R9Q9NYW1 312 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 TJP2Q9UDY2 1190 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 ELOVL7A1L3X0 281 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 DISP2A7MBM2 1401 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 DHX15O43143 795 aaKnown RBP10.66□□□□□ -0.7
CPT1A-201ENST00000265641 AP2A2O94973 939 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 ZNF182P17025 639 aaPredicted RBP10.66□□□□□ -0.7
CPT1A-201ENST00000265641 ZNF143P52747 638 aaPredicted RBP10.66□□□□□ -0.7
CPT1A-201ENST00000265641 FGD3Q5JSP0 725 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 EIF5AL1Q6IS14 154 aaKnown RBP10.66□□□□□ -0.7
CPT1A-201ENST00000265641 LINC00299Q6ZSB3 139 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 ANKFN1Q8N957 763 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 TTC29Q8NA56 475 aaPredicted RBP10.66□□□□□ -0.7
CPT1A-201ENST00000265641 C11orf24Q96F05 449 aaPredicted RBP10.66□□□□□ -0.7
CPT1A-201ENST00000265641 TRIT1Q9H3H1 467 aaKnown RBP10.66□□□□□ -0.7
CPT1A-201ENST00000265641 WDCPQ9H6R7 721 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 PEAK1Q9H792 1746 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 LIN28AQ9H9Z2 209 aaKnown RBP10.66□□□□□ -0.7
CPT1A-201ENST00000265641 USP29Q9HBJ7 922 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 PIH1D1Q9NWS0 290 aaKnown RBP10.66□□□□□ -0.7
CPT1A-201ENST00000265641 FABP3P05413 133 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 PPP3CCP48454 512 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 CDH15P55291 814 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 NOMO3P69849 1222 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 CBLBQ13191 982 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 PABPC1LQ4VXU2 614 aaKnown RBP10.66□□□□□ -0.7
CPT1A-201ENST00000265641 SLC30A10Q6XR72 485 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 TMEM199Q8N511 208 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 SLC37A3Q8NCC5 494 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 PHF10Q8WUB8 498 aaKnown RBP10.66□□□□□ -0.7
CPT1A-201ENST00000265641 TCEAL4Q96EI5 215 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 TRNT1Q96Q11 434 aaKnown RBP10.66□□□□□ -0.7
CPT1A-201ENST00000265641 ACOX2Q99424 681 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 TBCDQ9BTW9 1192 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 CCDC106Q9BWC9 280 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 MTMR10Q9NXD2 777 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 PAQR5Q9NXK6 330 aaPredicted RBP10.66□□□□□ -0.7
CPT1A-201ENST00000265641 CACNA1FO60840 1977 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 M0R233 179 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 WWP2O00308 870 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 ADAMDEC1O15204 470 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 SUV39H1O43463 412 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 XRCC1P18887 633 aaPredicted RBP10.66□□□□□ -0.7
CPT1A-201ENST00000265641 GSTM2P28161 218 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 PKLRP30613 574 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 GRIA1P42261 906 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 NEPROQ6NW34 567 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 AFTPHQ6ULP2 937 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 SYVN1Q86TM6 617 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 LAPTM4BQ86VI4 370 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 ZC3H7AQ8IWR0 971 aaKnown RBP10.66□□□□□ -0.7
CPT1A-201ENST00000265641 CD101Q93033 1021 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 PCDHB18PQ96TA0 734 aa10.66□□□□□ -0.7
CPT1A-201ENST00000265641 NUSAP1Q9BXS6 441 aaKnown RBP10.66□□□□□ -0.7
CPT1A-201ENST00000265641 WDR55Q9H6Y2 383 aaPredicted RBP10.66□□□□□ -0.7
CPT1A-201ENST00000265641 RCOR3Q9P2K3 495 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms