RNA–Protein interactions for RNA: ENST00000264389.6

COPS4-201, Transcript of COP9 signalosome subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS4, Length 1,744 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-201ENST00000264389 CHI3L2Q15782 390 aa8.27□□□□□ -1.09
COPS4-201ENST00000264389 HNRNPA1L2Q32P51 320 aaKnown RBP8.27□□□□□ -1.09
COPS4-201ENST00000264389 ZNF805Q5CZA5 627 aa8.27□□□□□ -1.09
COPS4-201ENST00000264389 ATG16L1Q676U5 607 aa8.27□□□□□ -1.09
COPS4-201ENST00000264389 CRTC1Q6UUV9 634 aa8.27□□□□□ -1.09
COPS4-201ENST00000264389 SNX20Q7Z614 316 aa8.27□□□□□ -1.09
COPS4-201ENST00000264389 CCDC91Q7Z6B0 441 aa8.27□□□□□ -1.09
COPS4-201ENST00000264389 CENPLQ8N0S6 344 aaPredicted RBP8.27□□□□□ -1.09
COPS4-201ENST00000264389 STK40Q8N2I9 435 aa8.27□□□□□ -1.09
COPS4-201ENST00000264389 RDH11Q8TC12 318 aa8.27□□□□□ -1.09
COPS4-201ENST00000264389 SREK1Q8WXA9 508 aaKnown RBP8.27□□□□□ -1.09
COPS4-201ENST00000264389 SUSD6Q92537 303 aa8.27□□□□□ -1.09
COPS4-201ENST00000264389 GRAMD1AQ96CP6 724 aa8.27□□□□□ -1.09
COPS4-201ENST00000264389 TTC1Q99614 292 aa8.27□□□□□ -1.09
COPS4-201ENST00000264389 ELAC2Q9BQ52 826 aaKnown RBP8.27□□□□□ -1.09
COPS4-201ENST00000264389 TSSK1BQ9BXA7 367 aa8.27□□□□□ -1.09
COPS4-201ENST00000264389 C1QTNF1Q9BXJ1 281 aa8.27□□□□□ -1.09
COPS4-201ENST00000264389 NMRAL1Q9HBL8 299 aa8.27□□□□□ -1.09
COPS4-201ENST00000264389 SLCO1B3Q9NPD5 702 aa8.27□□□□□ -1.09
COPS4-201ENST00000264389 PKD2L2Q9NZM6 624 aa8.27□□□□□ -1.09
COPS4-201ENST00000264389 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.27□□□□□ -1.09
COPS4-201ENST00000264389 EPS15L1Q9UBC2 864 aa8.27□□□□□ -1.09
COPS4-201ENST00000264389 COPG2Q9UBF2 871 aa8.27□□□□□ -1.09
COPS4-201ENST00000264389 CRLS1Q9UJA2 301 aa8.27□□□□□ -1.09
COPS4-201ENST00000264389 VWA7Q9Y334 891 aa8.27□□□□□ -1.09
COPS4-201ENST00000264389 ANKRD12Q6UB98 2062 aa8.27□□□□□ -1.09
COPS4-201ENST00000264389 TNRC18O15417 2968 aaPredicted RBP8.26□□□□□ -1.09
COPS4-201ENST00000264389 TK2O00142 265 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 ARNTLO00327 626 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 KPNA3O00505 521 aaPredicted RBP8.26□□□□□ -1.09
COPS4-201ENST00000264389 EBAG9O00559 213 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 KLF11O14901 512 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 GPR39O43194 453 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 RHOBTB1O94844 696 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 KLHL2O95198 593 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 LTA4HP09960 611 aaKnown RBP8.26□□□□□ -1.09
COPS4-201ENST00000264389 MYL2P10916 166 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 BPIP17213 487 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 POU3F3P20264 500 aaPredicted RBP8.26□□□□□ -1.09
COPS4-201ENST00000264389 ALDH3A1P30838 453 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 FMO4P31512 558 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 GRIA2P42262 883 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 CDKN1CP49918 316 aaPredicted RBP8.26□□□□□ -1.09
COPS4-201ENST00000264389 CDKN2DP55273 166 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 SF3A3Q12874 501 aaKnown RBP eCLIP8.26□□□□□ -1.09
COPS4-201ENST00000264389 NFATC2Q13469 925 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 CSHL1Q14406 222 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 ELAVL3Q14576 367 aaKnown RBP8.26□□□□□ -1.09
COPS4-201ENST00000264389 POM121L1PQ3SYA9 428 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 ZDHHC20Q5W0Z9 365 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 ERAP2Q6P179 960 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 KLC3Q6P597 504 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 ZNF549Q6P9A3 640 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 CERS6Q6ZMG9 384 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 PARS2Q7L3T8 475 aaKnown RBP8.26□□□□□ -1.09
COPS4-201ENST00000264389 SPATA21Q7Z572 469 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 PIM3Q86V86 326 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 SFTPA1Q8IWL2 248 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 PIANPQ8IYJ0 282 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 CBARPQ8N350 705 aaPredicted RBP8.26□□□□□ -1.09
COPS4-201ENST00000264389 ANKS4BQ8N8V4 417 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 CCDC197Q8NCU1 140 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 HCAR2Q8TDS4 363 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 CHFRQ96EP1 664 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 PPP1R16AQ96I34 528 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 SEC16BQ96JE7 1060 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 RPP25Q9BUL9 199 aaKnown RBP8.26□□□□□ -1.09
COPS4-201ENST00000264389 ASB8Q9H765 288 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 POPDC3Q9HBV1 291 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 SIRPGQ9P1W8 387 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 XPR1Q9UBH6 696 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 DKK3Q9UBP4 350 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 RUVBL2Q9Y230 463 aaKnown RBP8.26□□□□□ -1.09
COPS4-201ENST00000264389 STARD13Q9Y3M8 1113 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 COMMD10Q9Y6G5 202 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 C16orf96A6NNT2 1141 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 E5RI56 91 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 C1QTNF3-AMACRE9PGA6 284 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 H3BQ06 376 aaPredicted RBP8.26□□□□□ -1.09
COPS4-201ENST00000264389 GAPDHSO14556 408 aaPredicted RBP8.26□□□□□ -1.09
COPS4-201ENST00000264389 SNX3O60493 162 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 DNAJC6O75061 913 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 VPS26AO75436 327 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 PYGLP06737 847 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 EPHX1P07099 455 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 CCDC166P0CW27 439 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 PKMP14618 531 aaKnown RBP8.26□□□□□ -1.09
COPS4-201ENST00000264389 CPA3P15088 417 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 ITGB7P26010 798 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 IL12RB1P42701 662 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 PTGER3P43115 390 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 SOX9P48436 509 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 PTPN5P54829 565 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 DMTNQ08495 405 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 BST1Q10588 318 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 DLG1Q12959 904 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 ITGA9Q13797 1035 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 E2F5Q15329 346 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 FAM83EQ2M2I3 478 aa8.26□□□□□ -1.09
COPS4-201ENST00000264389 C9orf64Q5T6V5 341 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms