RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 ZNF398Q8TD17 642 aa12.5□□□□□ -0.41
CLNS1A-201ENST00000263309 SNF8Q96H20 258 aa12.5□□□□□ -0.41
CLNS1A-201ENST00000263309 ZNF514Q96K75 400 aaPredicted RBP12.5□□□□□ -0.41
CLNS1A-201ENST00000263309 BMFQ96LC9 184 aa12.5□□□□□ -0.41
CLNS1A-201ENST00000263309 CDC6Q99741 560 aa12.5□□□□□ -0.41
CLNS1A-201ENST00000263309 TSSK1BQ9BXA7 367 aa12.5□□□□□ -0.41
CLNS1A-201ENST00000263309 TSPYL1Q9H0U9 437 aa12.5□□□□□ -0.41
CLNS1A-201ENST00000263309 ABCG8Q9H221 673 aa12.5□□□□□ -0.41
CLNS1A-201ENST00000263309 VPS37BQ9H9H4 285 aa12.5□□□□□ -0.41
CLNS1A-201ENST00000263309 CRLS1Q9UJA2 301 aa12.5□□□□□ -0.41
CLNS1A-201ENST00000263309 NYNRINQ9P2P1 1898 aaKnown RBP12.5□□□□□ -0.41
CLNS1A-201ENST00000263309 NUP205Q92621 2012 aa12.5□□□□□ -0.41
CLNS1A-201ENST00000263309 CHD5Q8TDI0 1954 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 A0A1W2PR77 199 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 KLHL33A6NCF5 533 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 POM121BA6NF01 834 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 C4orf47A7E2U8 309 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 PATE3B3GLJ2 98 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 QSOX1O00391 747 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 VEGFDO43915 354 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 KCNJ13O60928 360 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 USP12O75317 370 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 ANXA6P08133 673 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 ATXN1LP0C7T5 689 aaKnown RBP12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 ZSCAN5DPP0CG00 497 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 CDK4P11802 303 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 SLC2A4P14672 509 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 TPH1P17752 444 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 TRIM23P36406 574 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 GRK6P43250 576 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 RXRGP48443 463 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 TERF1P54274 439 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 SESN2P58004 480 aaPredicted RBP12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 PFN3P60673 137 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 SRP54P61011 504 aaKnown RBP12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 ILF3Q12906 894 aaKnown RBP eCLIP12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 POU6F1Q14863 301 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 ZNF423Q2M1K9 1284 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 GLE1Q53GS7 698 aaKnown RBP12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 FASTKD1Q53R41 847 aaKnown RBP12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 STPG1Q5TH74 334 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 ALS2CLQ60I27 953 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 KCTD11Q693B1 232 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 C8orf74Q6P047 294 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 GCNT7Q6ZNI0 430 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 TAS2R42Q7RTR8 314 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 HID1Q8IV36 788 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 MCUQ8NE86 351 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 OR4K2Q8NGD2 314 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 C1orf216Q8TAB5 229 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 RHBDD1Q8TEB9 315 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 RANBP9Q96S59 729 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 KLF6Q99612 283 aaPredicted RBP12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 RTKNQ9BST9 563 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 TEX101Q9BY14 249 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 GSDMCQ9BYG8 508 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 STN1Q9H668 368 aaKnown RBP12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 ASB8Q9H765 288 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 EBF2Q9HAK2 575 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 TRIM39Q9HCM9 518 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 BPIFA1Q9NP55 256 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 MBNL1Q9NR56 388 aaKnown RBP12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 DNAAF2Q9NVR5 837 aaKnown RBP12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 VPS9D1Q9Y2B5 631 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 OR1A2Q9Y585 309 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 CSNK1G3Q9Y6M4 447 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 CEP250Q9BV73 2442 aa12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 MYO18AQ92614 2054 aaKnown RBP12.49□□□□□ -0.41
CLNS1A-201ENST00000263309 CACNA1IQ9P0X4 2223 aa12.48□□□□□ -0.41
CLNS1A-201ENST00000263309 A0A1B0GTQ1 180 aa12.48□□□□□ -0.41
CLNS1A-201ENST00000263309 LNP1A1A4G5 178 aa12.48□□□□□ -0.41
CLNS1A-201ENST00000263309 CSF2P04141 144 aa12.48□□□□□ -0.41
CLNS1A-201ENST00000263309 POLBP06746 335 aa12.48□□□□□ -0.41
CLNS1A-201ENST00000263309 C1SP09871 688 aa12.48□□□□□ -0.41
CLNS1A-201ENST00000263309 LHCGRP22888 699 aa12.48□□□□□ -0.41
CLNS1A-201ENST00000263309 PMLP29590 882 aa12.48□□□□□ -0.41
CLNS1A-201ENST00000263309 AKT1P31749 480 aa12.48□□□□□ -0.41
CLNS1A-201ENST00000263309 CHRNA4P43681 627 aa12.48□□□□□ -0.41
CLNS1A-201ENST00000263309 ARL4CP56559 192 aa12.48□□□□□ -0.41
CLNS1A-201ENST00000263309 LRP8Q14114 963 aa12.48□□□□□ -0.41
CLNS1A-201ENST00000263309 MORF4L2Q15014 288 aa12.48□□□□□ -0.41
CLNS1A-201ENST00000263309 ZRANB3Q5FWF4 1079 aa12.48□□□□□ -0.41
CLNS1A-201ENST00000263309 IZUMO3Q5VZ72 239 aa12.48□□□□□ -0.41
CLNS1A-201ENST00000263309 LVRNQ6Q4G3 990 aa12.48□□□□□ -0.41
CLNS1A-201ENST00000263309 CERS6Q6ZMG9 384 aa12.48□□□□□ -0.41
CLNS1A-201ENST00000263309 HEATR4Q86WZ0 1026 aa12.48□□□□□ -0.41
CLNS1A-201ENST00000263309 JAMLQ86YT9 394 aa12.48□□□□□ -0.41
CLNS1A-201ENST00000263309 GALNT13Q8IUC8 556 aa12.48□□□□□ -0.41
CLNS1A-201ENST00000263309 OTUD6BQ8N6M0 293 aa12.48□□□□□ -0.41
CLNS1A-201ENST00000263309 OR6P1Q8NGX9 317 aa12.48□□□□□ -0.41
CLNS1A-201ENST00000263309 TBATAQ96M53 351 aa12.48□□□□□ -0.41
CLNS1A-201ENST00000263309 VPS35Q96QK1 796 aa12.48□□□□□ -0.41
CLNS1A-201ENST00000263309 CASS4Q9NQ75 786 aa12.48□□□□□ -0.41
CLNS1A-201ENST00000263309 NLE1Q9NVX2 485 aaPredicted RBP12.48□□□□□ -0.41
CLNS1A-201ENST00000263309 IL17CQ9P0M4 197 aa12.48□□□□□ -0.41
CLNS1A-201ENST00000263309 VPS18Q9P253 973 aa12.48□□□□□ -0.41
CLNS1A-201ENST00000263309 NFKBIL1Q9UBC1 381 aaPredicted RBP12.48□□□□□ -0.41
CLNS1A-201ENST00000263309 APOBEC3BQ9UH17 382 aaKnown RBP12.48□□□□□ -0.41
CLNS1A-201ENST00000263309 ZNHIT2Q9UHR6 403 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms