RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 PSMA4P25789 261 aaKnown RBP9.09□□□□□ -0.95
MSH4-201ENST00000263187 ADSLP30566 484 aaPredicted RBP9.09□□□□□ -0.95
MSH4-201ENST00000263187 PBX3P40426 434 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 CPT1AP50416 773 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 PURAQ00577 322 aaKnown RBP9.09□□□□□ -0.95
MSH4-201ENST00000263187 PIGFQ07326 219 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 LPIN1Q14693 890 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 PYCR3Q53H96 274 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 MS4A13Q5J8X5 152 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 C10orf120Q5SQS8 335 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 ANKRD34AQ69YU3 496 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 KLHL35Q6PF15 583 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 TBPL2Q6SJ96 375 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 TMEM26Q6ZUK4 368 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 GPR141Q7Z602 305 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 CALML6Q8TD86 181 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 RSPH1Q8WYR4 309 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 LRRC58Q96CX6 371 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 ACBD6Q9BR61 282 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 A0A1W2PPW3 197 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 DLGAP1O14490 977 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 HNRNPCP07910 306 aaKnown RBP eCLIP9.09□□□□□ -0.95
MSH4-201ENST00000263187 CD247P20963 164 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 OR1G1P47890 313 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 MTPNP58546 118 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 TIAL1Q01085 375 aaKnown RBP eCLIP9.09□□□□□ -0.95
MSH4-201ENST00000263187 NRG1Q02297 640 aaPredicted RBP9.09□□□□□ -0.95
MSH4-201ENST00000263187 PMS2P3Q13401 168 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 TIGD7Q6NT04 549 aaPredicted RBP9.09□□□□□ -0.95
MSH4-201ENST00000263187 FAM171BQ6P995 826 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 SLC2A7Q6PXP3 512 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 ERMP1Q7Z2K6 904 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 SLC22A9Q8IVM8 553 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 LRRC43Q8N309 656 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 C12orf43Q96C57 262 aaKnown RBP9.09□□□□□ -0.95
MSH4-201ENST00000263187 ZBED2Q9BTP6 218 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 PRKD2Q9BZL6 878 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 POLR1BQ9H9Y6 1135 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 VPS45Q9NRW7 570 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 EXD2Q9NVH0 621 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 DOLKQ9UPQ8 538 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 UNC80Q8N2C7 3258 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 PDCD11Q14690 1871 aaKnown RBP9.09□□□□□ -0.95
MSH4-201ENST00000263187 TSC2P49815 1807 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 SLC12A8A0AV02 714 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 FXYD1O00168 92 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 FGF10O15520 208 aaPredicted RBP9.09□□□□□ -0.95
MSH4-201ENST00000263187 MAN1A2O60476 641 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 ATE1O95260 518 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 MTHFD2P13995 350 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 FASP25445 335 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 ELK4P28324 431 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 CLCN2P51788 898 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 HK2P52789 917 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 DGKQP52824 942 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 TXNL4AP83876 142 aaKnown RBP9.09□□□□□ -0.95
MSH4-201ENST00000263187 CLCQ05315 142 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 LIPEQ05469 1076 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 MERTKQ12866 999 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 DCTN2Q13561 401 aaKnown RBP9.09□□□□□ -0.95
MSH4-201ENST00000263187 LAPTM5Q13571 262 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 ZNF235Q14590 738 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 LDLRAP1Q5SW96 308 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 DUS1LQ6P1R4 473 aaKnown RBP9.09□□□□□ -0.95
MSH4-201ENST00000263187 CD300LGQ6UXG3 332 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 RAB44Q7Z6P3 723 aaPredicted RBP9.09□□□□□ -0.95
MSH4-201ENST00000263187 THEM5Q8N1Q8 247 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 FBXO39Q8N4B4 442 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 SIDT2Q8NBJ9 832 aaKnown RBP9.09□□□□□ -0.95
MSH4-201ENST00000263187 OR7D4Q8NG98 312 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 OR4K2Q8NGD2 314 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 GIPC2Q8TF65 315 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 TFAP2CQ92754 450 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 CCDC126Q96EE4 140 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 FAR2Q96K12 515 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 GPR21Q99679 349 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 KCTD14Q9BQ13 255 aaPredicted RBP9.09□□□□□ -0.95
MSH4-201ENST00000263187 EPB41L1Q9H4G0 881 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 NIPSNAP2O75323 286 aa9.08□□□□□ -0.96
MSH4-201ENST00000263187 GSK3BP49841 420 aa9.08□□□□□ -0.96
MSH4-201ENST00000263187 KCNQ1P51787 676 aa9.08□□□□□ -0.96
MSH4-201ENST00000263187 SGO1Q5FBB7 561 aa9.08□□□□□ -0.96
MSH4-201ENST00000263187 FGD3Q5JSP0 725 aa9.08□□□□□ -0.96
MSH4-201ENST00000263187 ZNF467Q7Z7K2 595 aaPredicted RBP9.08□□□□□ -0.96
MSH4-201ENST00000263187 HS3ST5Q8IZT8 346 aa9.08□□□□□ -0.96
MSH4-201ENST00000263187 ISOC1Q96CN7 298 aa9.08□□□□□ -0.96
MSH4-201ENST00000263187 DTNBP1Q96EV8 351 aa9.08□□□□□ -0.96
MSH4-201ENST00000263187 SEPT5Q99719 369 aaPredicted RBP9.08□□□□□ -0.96
MSH4-201ENST00000263187 SMOC2Q9H3U7 446 aa9.08□□□□□ -0.96
MSH4-201ENST00000263187 HCSTQ9UBK5 93 aa9.08□□□□□ -0.96
MSH4-201ENST00000263187 ZMYM5Q9UJ78 669 aa9.08□□□□□ -0.96
MSH4-201ENST00000263187 PCDHGC4Q9Y5F7 938 aa9.08□□□□□ -0.96
MSH4-201ENST00000263187 SPO11Q9Y5K1 396 aa9.08□□□□□ -0.96
MSH4-201ENST00000263187 ZFC3H1O60293 1989 aaKnown RBP9.08□□□□□ -0.96
MSH4-201ENST00000263187 A8MX80 341 aa9.08□□□□□ -0.96
MSH4-201ENST00000263187 RAMP2O60895 175 aa9.08□□□□□ -0.96
MSH4-201ENST00000263187 ECI2O75521 394 aa9.08□□□□□ -0.96
MSH4-201ENST00000263187 IGLV3-25P01717 112 aa9.08□□□□□ -0.96
MSH4-201ENST00000263187 ATXN1LP0C7T5 689 aaKnown RBP9.08□□□□□ -0.96
MSH4-201ENST00000263187 ZNF37AP17032 561 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms