RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 PAMP19021 973 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 IMPDH1P20839 514 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 ENDOUP21128 410 aaKnown RBP14.93□□□□□ -0.02
XRCC1-201ENST00000262887 EDNRBP24530 442 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 ALDH3A2P51648 485 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 ARSFP54793 590 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 E2F2Q14209 437 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 RPS6KA2Q15349 733 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 KIAA0408Q6ZU52 694 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 BNIPLQ7Z465 357 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 PTRH1Q86Y79 214 aaKnown RBP14.93□□□□□ -0.02
XRCC1-201ENST00000262887 MUL1Q969V5 352 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 SPATA33Q96N06 139 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 CHID1Q9BWS9 393 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 TRIM54Q9BYV2 358 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 DSEQ9UL01 958 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 SHROOM3Q8TF72 1996 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 A0A0G2JMZ2 1700 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 LRRC37A2A6NM11 1700 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 COL4A5P29400 1685 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 CEP350Q5VT06 3117 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 PSMD3O43242 534 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 HUS1O60921 280 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 THRBP10828 461 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 BDNFP23560 247 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 LIPEQ05469 1076 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 NFYCQ13952 458 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 CTF1Q16619 201 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 FUT11Q495W5 492 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 AASDHQ4L235 1098 aaPredicted RBP14.93□□□□□ -0.02
XRCC1-201ENST00000262887 PYCR3Q53H96 274 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 IL31Q6EBC2 164 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 CLYBLQ8N0X4 340 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 RNF145Q96MT1 663 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 PCDH12Q9NPG4 1184 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 KLQ9UEF7 1012 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 AAR2Q9Y312 384 aaKnown RBP14.93□□□□□ -0.02
XRCC1-201ENST00000262887 DNAJC15Q9Y5T4 150 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 C22orf31O95567 290 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 VTNP04004 478 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 CDH13P55290 713 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 DAG1Q14118 895 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 GRB7Q14451 532 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 ACAP2Q15057 778 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 IMPG1Q17R60 797 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 INTS6LQ5JSJ4 861 aaKnown RBP14.93□□□□□ -0.02
XRCC1-201ENST00000262887 ZNF678Q5SXM1 525 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 NBPF12Q5TAG4 269 aaPredicted RBP14.93□□□□□ -0.02
XRCC1-201ENST00000262887 SLC22A16Q86VW1 577 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 CLEC4FQ8N1N0 589 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 SCML4Q8N228 414 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 MFSD4AQ8N468 514 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 BIRC7Q96CA5 298 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 CELF6Q96J87 481 aaKnown RBP14.93□□□□□ -0.02
XRCC1-201ENST00000262887 PDE10AQ9Y233 779 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 HTR1AP08908 422 aa14.92□□□□□ -0.02
XRCC1-201ENST00000262887 NDUFV1P49821 464 aa14.92□□□□□ -0.02
XRCC1-201ENST00000262887 APLP1P51693 650 aa14.92□□□□□ -0.02
XRCC1-201ENST00000262887 SEMA3BQ13214 749 aa14.92□□□□□ -0.02
XRCC1-201ENST00000262887 ZNF789Q5FWF6 425 aa14.92□□□□□ -0.02
XRCC1-201ENST00000262887 PAGE2BQ5JRK9 111 aa14.92□□□□□ -0.02
XRCC1-201ENST00000262887 CATSPER4Q7RTX7 472 aa14.92□□□□□ -0.02
XRCC1-201ENST00000262887 DCP1BQ8IZD4 617 aaKnown RBP14.92□□□□□ -0.02
XRCC1-201ENST00000262887 CRYBG2Q8N1P7 616 aa14.92□□□□□ -0.02
XRCC1-201ENST00000262887 PIK3C3Q8NEB9 887 aa14.92□□□□□ -0.02
XRCC1-201ENST00000262887 FICDQ9BVA6 458 aa14.92□□□□□ -0.02
XRCC1-201ENST00000262887 ALG9Q9H6U8 611 aa14.92□□□□□ -0.02
XRCC1-201ENST00000262887 PRELID1Q9Y255 219 aa14.92□□□□□ -0.02
XRCC1-201ENST00000262887 SNX5Q9Y5X3 404 aa14.92□□□□□ -0.02
XRCC1-201ENST00000262887 I6L893 689 aaPredicted RBP14.92□□□□□ -0.02
XRCC1-201ENST00000262887 PIP5K1BO14986 540 aa14.92□□□□□ -0.02
XRCC1-201ENST00000262887 EGFRP00533 1210 aa14.92□□□□□ -0.02
XRCC1-201ENST00000262887 BMP4P12644 408 aa14.92□□□□□ -0.02
XRCC1-201ENST00000262887 SERPINB1P30740 379 aa14.92□□□□□ -0.02
XRCC1-201ENST00000262887 TPD52P55327 224 aaPredicted RBP14.92□□□□□ -0.02
XRCC1-201ENST00000262887 GABARAPL2P60520 117 aa14.92□□□□□ -0.02
XRCC1-201ENST00000262887 ECT2LQ008S8 904 aa14.92□□□□□ -0.02
XRCC1-201ENST00000262887 PIGFQ07326 219 aa14.92□□□□□ -0.02
XRCC1-201ENST00000262887 CELF3Q5SZQ8 465 aaKnown RBP14.92□□□□□ -0.02
XRCC1-201ENST00000262887 HFE2Q6ZVN8 426 aa14.92□□□□□ -0.02
XRCC1-201ENST00000262887 NAT16Q8N8M0 369 aa14.92□□□□□ -0.02
XRCC1-201ENST00000262887 OR7A2PQ8NGA2 310 aa14.92□□□□□ -0.02
XRCC1-201ENST00000262887 ANKRD49Q8WVL7 239 aa14.92□□□□□ -0.02
XRCC1-201ENST00000262887 C18orf25Q96B23 403 aaPredicted RBP14.92□□□□□ -0.02
XRCC1-201ENST00000262887 ZNF229Q9UJW7 825 aa14.92□□□□□ -0.02
XRCC1-201ENST00000262887 NOTOA8MTQ0 251 aa14.91□□□□□ -0.02
XRCC1-201ENST00000262887 M0R3G1 203 aa14.91□□□□□ -0.02
XRCC1-201ENST00000262887 PSMD11O00231 422 aa14.91□□□□□ -0.02
XRCC1-201ENST00000262887 DNAJB5O75953 348 aa14.91□□□□□ -0.02
XRCC1-201ENST00000262887 MATN4O95460 622 aa14.91□□□□□ -0.02
XRCC1-201ENST00000262887 ALPLP05186 524 aa14.91□□□□□ -0.02
XRCC1-201ENST00000262887 COQ5Q5HYK3 327 aa14.91□□□□□ -0.02
XRCC1-201ENST00000262887 C6orf141Q5SZD1 244 aa14.91□□□□□ -0.02
XRCC1-201ENST00000262887 PPP2R2DQ66LE6 453 aa14.91□□□□□ -0.02
XRCC1-201ENST00000262887 LRRC52Q8N7C0 313 aa14.91□□□□□ -0.02
XRCC1-201ENST00000262887 ATP6V0D2Q8N8Y2 350 aa14.91□□□□□ -0.02
XRCC1-201ENST00000262887 BPIFB1Q8TDL5 484 aa14.91□□□□□ -0.02
XRCC1-201ENST00000262887 TWIST2Q8WVJ9 160 aa14.91□□□□□ -0.02
XRCC1-201ENST00000262887 TRIB2Q92519 343 aa14.91□□□□□ -0.02
XRCC1-201ENST00000262887 EXT2Q93063 718 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms