RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 CTSKP43235 329 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 NAGLUP54802 743 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 XIAPP98170 497 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 MXD1Q05195 221 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 OGFRL1Q5TC84 451 aaPredicted RBP12.83□□□□□ -0.36
TTC39A-202ENST00000262676 RNF43Q68DV7 783 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 ZCCHC9Q8N567 271 aaKnown RBP12.83□□□□□ -0.36
TTC39A-202ENST00000262676 STAG3L4Q8TBR4 150 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 TOP1MTQ969P6 601 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 MTMR8Q96EF0 704 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 ZSCAN5AQ9BUG6 496 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 IFT46Q9NQC8 304 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 E7ENX8 843 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 IFNGP01579 166 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 CCND3P30281 292 aaPredicted RBP12.83□□□□□ -0.36
TTC39A-202ENST00000262676 E2F2Q14209 437 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 ZNF234Q14588 700 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 USP45Q70EL2 814 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 CDYL2Q8N8U2 506 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 FAM47BQ8NA70 645 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 PIWIL2Q8TC59 973 aaKnown RBP12.83□□□□□ -0.36
TTC39A-202ENST00000262676 PIK3R3Q92569 461 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 NOL11Q9H8H0 719 aaKnown RBP12.83□□□□□ -0.36
TTC39A-202ENST00000262676 NEDD8-MDP1E9PL57 170 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 SASH3O75995 380 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 SLITRK3O94933 977 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 HGFP14210 728 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 ITIH1P19827 911 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 ATP5C1P36542 298 aaKnown RBP12.83□□□□□ -0.36
TTC39A-202ENST00000262676 C6orf52Q5T4I8 152 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 ZNF296Q8WUU4 475 aaPredicted RBP12.83□□□□□ -0.36
TTC39A-202ENST00000262676 TKTL2Q9H0I9 626 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 CIDEBQ9UHD4 219 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 SPEF1Q9Y4P9 236 aa12.83□□□□□ -0.36
TTC39A-202ENST00000262676 UMODL1Q5DID0 1318 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 NWD1Q149M9 1564 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 BNIP2Q12982 314 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 OTOP1Q7RTM1 612 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 TBC1D21Q8IYX1 336 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 AENQ8WTP8 325 aaKnown RBP12.82□□□□□ -0.36
TTC39A-202ENST00000262676 ITCHQ96J02 903 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 GAL3ST1Q99999 423 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 MARCH2Q9P0N8 246 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 POLR3HQ9Y535 204 aaPredicted RBP12.82□□□□□ -0.36
TTC39A-202ENST00000262676 DDX3YO15523 660 aaKnown RBP12.82□□□□□ -0.36
TTC39A-202ENST00000262676 ITPKBP27987 946 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 NRG1Q02297 640 aaPredicted RBP12.82□□□□□ -0.36
TTC39A-202ENST00000262676 FSTL1Q12841 308 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 ABRQ12979 859 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 GPM6BQ13491 265 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 ELOVL4Q9GZR5 314 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 ZNF350Q9GZX5 532 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 ALKBH4Q9NXW9 302 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 TBC1D3DA0A087WVF3 549 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 TBC1D3IA0A087WXS9 549 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 TBC1D3EA0A087X179 549 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 TBC1D3KA0A087X1G2 549 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 TBC1D3FA6NER0 549 aaPredicted RBP12.82□□□□□ -0.36
TTC39A-202ENST00000262676 TISP43B9A030 160 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 TBC1D3LB9A6J9 549 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 SUV39H1O43463 412 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 TBL1XO60907 577 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 TBC1D3HP0C7X1 549 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 CD86P42081 329 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 MTHFRP42898 656 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 C1QBPQ07021 282 aaKnown RBP12.82□□□□□ -0.36
TTC39A-202ENST00000262676 DUSP4Q13115 394 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 PTGES3Q15185 160 aaKnown RBP12.82□□□□□ -0.36
TTC39A-202ENST00000262676 TBC1D3GQ6DHY5 549 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 TBC1D3CQ6IPX1 549 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 CNSTQ6PJW8 725 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 TBC1D3Q8IZP1 549 aaPredicted RBP12.82□□□□□ -0.36
TTC39A-202ENST00000262676 KCTD4Q8WVF5 259 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 CCNB1IP1Q9NPC3 277 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 CHST7Q9NS84 486 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 ADGRE2Q9UHX3 823 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 CORO1CQ9ULV4 474 aaPredicted RBP12.82□□□□□ -0.36
TTC39A-202ENST00000262676 TIMM8BQ9Y5J9 83 aaPredicted RBP12.82□□□□□ -0.36
TTC39A-202ENST00000262676 RFXANKO14593 260 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 ULK1O75385 1050 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 UGT2B17O75795 530 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 OR4Q2P0C623 313 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 SLC6A2P23975 617 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 DNASE1L1P49184 302 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 CXorf40BQ96DE9 158 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 OR52E6Q96RD3 313 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 TM6SF2Q9BZW4 377 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 ELAC1Q9H777 363 aaKnown RBP12.82□□□□□ -0.36
TTC39A-202ENST00000262676 DNAJC11Q9NVH1 559 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.82□□□□□ -0.36
TTC39A-202ENST00000262676 HACD1B0YJ81 288 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 GNB5O14775 395 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 MBTD1Q05BQ5 628 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 FAM91A1Q658Y4 838 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 DEFB106AQ8N104 65 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 RP9Q8TA86 221 aaKnown RBP12.82□□□□□ -0.36
TTC39A-202ENST00000262676 PNPT1Q8TCS8 783 aaKnown RBP12.82□□□□□ -0.36
TTC39A-202ENST00000262676 RERGQ96A58 199 aaPredicted RBP12.82□□□□□ -0.36
TTC39A-202ENST00000262676 ZNF607Q96SK3 696 aa12.82□□□□□ -0.36
TTC39A-202ENST00000262676 PCDHGA10Q9Y5H3 936 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms