RNA–Protein interactions for RNA: ENST00000262327.9

LIG3-201, Transcript of DNA ligase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIG3, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-201ENST00000262327 GPX3P22352 226 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 CD97P48960 835 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 ENTPD1P49961 510 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 KPNA2P52292 529 aaKnown RBP10.03□□□□□ -0.8
LIG3-201ENST00000262327 GALNT3Q14435 633 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 OR4D1Q15615 310 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 ANKDD1AQ495B1 522 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 NHSL2Q5HYW2 709 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 AGMOQ6ZNB7 445 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 SDR16C5Q8N3Y7 309 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 SLC43A3Q8NBI5 491 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 OR13C4Q8NGS5 318 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 TEX37Q96LM6 180 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 HBEGFQ99075 208 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 SEPHS2Q99611 448 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 HAUS8Q9BT25 410 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 C1orf50Q9BV19 199 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 NOL6Q9H6R4 1146 aaKnown RBP10.03□□□□□ -0.8
LIG3-201ENST00000262327 PNPLA3Q9NST1 481 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 CMTM6Q9NX76 183 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 UXTQ9UBK9 157 aaPredicted RBP10.03□□□□□ -0.8
LIG3-201ENST00000262327 LAMA2P24043 3122 aaKnown RBP10.03□□□□□ -0.8
LIG3-201ENST00000262327 PDCD11Q14690 1871 aaKnown RBP10.03□□□□□ -0.8
LIG3-201ENST00000262327 A0A0U1RQS6 177 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 UBA6A0AVT1 1052 aaPredicted RBP10.03□□□□□ -0.8
LIG3-201ENST00000262327 ANGPT2O15123 496 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 CAPNS1P04632 268 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 RBP1P09455 135 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 GFAPP14136 432 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 HGFP14210 728 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 IMPDH1P20839 514 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 PRDX3P30048 256 aaKnown RBP10.03□□□□□ -0.8
LIG3-201ENST00000262327 CLCN2P51788 898 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 MGAT3Q09327 533 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 SEMA3AQ14563 771 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 UGT3A2Q3SY77 523 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 FAM26DQ5JW98 314 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 KDELC1Q6UW63 502 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 CMTR2Q8IYT2 770 aaKnown RBP10.03□□□□□ -0.8
LIG3-201ENST00000262327 NAT16Q8N8M0 369 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 TWIST2Q8WVJ9 160 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 PPP1R14BQ96C90 147 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 UBXN10Q96LJ8 280 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 CYP2S1Q96SQ9 504 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 EFHD1Q9BUP0 239 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 NAA50Q9GZZ1 169 aaKnown RBP10.03□□□□□ -0.8
LIG3-201ENST00000262327 TUBB1Q9H4B7 451 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 CATSPERBQ9H7T0 1116 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 DHRS12A0PJE2 317 aa10.02□□□□□ -0.81
LIG3-201ENST00000262327 HTR3EA5X5Y0 456 aa10.02□□□□□ -0.81
LIG3-201ENST00000262327 DLGAP1O14490 977 aa10.02□□□□□ -0.81
LIG3-201ENST00000262327 S1PR4O95977 384 aa10.02□□□□□ -0.81
LIG3-201ENST00000262327 PCSK1P29120 753 aa10.02□□□□□ -0.81
LIG3-201ENST00000262327 LEPRP48357 1165 aaKnown RBP10.02□□□□□ -0.81
LIG3-201ENST00000262327 DCTN2Q13561 401 aaKnown RBP10.02□□□□□ -0.81
LIG3-201ENST00000262327 LPIN1Q14693 890 aa10.02□□□□□ -0.81
LIG3-201ENST00000262327 ACAP2Q15057 778 aa10.02□□□□□ -0.81
LIG3-201ENST00000262327 ZIK1Q3SY52 487 aaPredicted RBP10.02□□□□□ -0.81
LIG3-201ENST00000262327 SMUG1Q53HV7 270 aa10.02□□□□□ -0.81
LIG3-201ENST00000262327 ZNF362Q5T0B9 420 aaPredicted RBP10.02□□□□□ -0.81
LIG3-201ENST00000262327 PIK3R6Q5UE93 754 aa10.02□□□□□ -0.81
LIG3-201ENST00000262327 ZNF549Q6P9A3 640 aa10.02□□□□□ -0.81
LIG3-201ENST00000262327 KLHL35Q6PF15 583 aa10.02□□□□□ -0.81
LIG3-201ENST00000262327 SCD5Q86SK9 330 aa10.02□□□□□ -0.81
LIG3-201ENST00000262327 MIB1Q86YT6 1006 aa10.02□□□□□ -0.81
LIG3-201ENST00000262327 TCF12Q99081 682 aa10.02□□□□□ -0.81
LIG3-201ENST00000262327 CLK4Q9HAZ1 481 aaKnown RBP10.02□□□□□ -0.81
LIG3-201ENST00000262327 FAF1Q9UNN5 650 aaPredicted RBP10.02□□□□□ -0.81
LIG3-201ENST00000262327 SQORQ9Y6N5 450 aa10.02□□□□□ -0.81
LIG3-201ENST00000262327 AP3B1O00203 1094 aa10.02□□□□□ -0.81
LIG3-201ENST00000262327 EI24O14681 340 aa10.02□□□□□ -0.81
LIG3-201ENST00000262327 B4GAT1O43505 415 aa10.02□□□□□ -0.81
LIG3-201ENST00000262327 TSPAN3O60637 253 aa10.02□□□□□ -0.81
LIG3-201ENST00000262327 HSPA8P11142 646 aaKnown RBP10.02□□□□□ -0.81
LIG3-201ENST00000262327 IDO1P14902 403 aa10.02□□□□□ -0.81
LIG3-201ENST00000262327 ARL1P40616 181 aaPredicted RBP10.02□□□□□ -0.81
LIG3-201ENST00000262327 CLCN5P51795 746 aa10.02□□□□□ -0.81
LIG3-201ENST00000262327 C16orf72Q14CZ0 275 aa10.02□□□□□ -0.81
LIG3-201ENST00000262327 DDR2Q16832 855 aa10.02□□□□□ -0.81
LIG3-201ENST00000262327 CYP51A1Q16850 503 aa10.02□□□□□ -0.81
LIG3-201ENST00000262327 USP41Q3LFD5 358 aa10.02□□□□□ -0.81
LIG3-201ENST00000262327 SIRPB2Q5JXA9 342 aa10.02□□□□□ -0.81
LIG3-201ENST00000262327 ERMP1Q7Z2K6 904 aa10.02□□□□□ -0.81
LIG3-201ENST00000262327 MAGEE2Q8TD90 523 aaPredicted RBP10.02□□□□□ -0.81
LIG3-201ENST00000262327 TFAP2CQ92754 450 aa10.02□□□□□ -0.81
LIG3-201ENST00000262327 ACOX2Q99424 681 aa10.02□□□□□ -0.81
LIG3-201ENST00000262327 AGO3Q9H9G7 860 aaKnown RBP10.02□□□□□ -0.81
LIG3-201ENST00000262327 ABI2Q9NYB9 513 aaPredicted RBP10.02□□□□□ -0.81
LIG3-201ENST00000262327 RRN3Q9NYV6 651 aa10.02□□□□□ -0.81
LIG3-201ENST00000262327 RALGAPA2Q2PPJ7 1873 aa10.01□□□□□ -0.81
LIG3-201ENST00000262327 ENPP3O14638 875 aa10.01□□□□□ -0.81
LIG3-201ENST00000262327 SOAT2O75908 522 aa10.01□□□□□ -0.81
LIG3-201ENST00000262327 CDK9P50750 372 aaKnown RBP10.01□□□□□ -0.81
LIG3-201ENST00000262327 TRAP1Q12931 704 aaKnown RBP10.01□□□□□ -0.81
LIG3-201ENST00000262327 NEDD8Q15843 81 aa10.01□□□□□ -0.81
LIG3-201ENST00000262327 PSMD5Q16401 504 aa10.01□□□□□ -0.81
LIG3-201ENST00000262327 OTUD3Q5T2D3 398 aaPredicted RBP10.01□□□□□ -0.81
LIG3-201ENST00000262327 MARC1Q5VT66 337 aa10.01□□□□□ -0.81
LIG3-201ENST00000262327 GPR107Q5VW38 600 aa10.01□□□□□ -0.81
LIG3-201ENST00000262327 GPR141Q7Z602 305 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms