RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 MOXD2PA6NHM9 499 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 CDC7O00311 574 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 PIRO00625 290 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 HSPA8P11142 646 aaKnown RBP12.95□□□□□ -0.34
SNX1-201ENST00000261889 ACADSBP45954 432 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 GPR15P49685 360 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 PFKPQ01813 784 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 GALNT2Q10471 571 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 SPCS2Q15005 226 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 ZBTB6Q15916 424 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 TMEM236Q5W0B7 351 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 PPP4R4Q6NUP7 873 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 NOTUMQ6P988 496 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 Q6ZNX1 250 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 LARP4Q71RC2 724 aaKnown RBP eCLIP12.95□□□□□ -0.34
SNX1-201ENST00000261889 PDZD4Q76G19 769 aaPredicted RBP12.95□□□□□ -0.34
SNX1-201ENST00000261889 DSG4Q86SJ6 1040 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 ISCA2Q86U28 154 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 LRRC58Q96CX6 371 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 MAELQ96JY0 434 aaKnown RBP12.95□□□□□ -0.34
SNX1-201ENST00000261889 BPIFA1Q9NP55 256 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 VWA7Q9Y334 891 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 TRIM17Q9Y577 477 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 PTGESO14684 152 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 C1QCP02747 245 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 EEF1DP29692 281 aaKnown RBP12.94□□□□□ -0.34
SNX1-201ENST00000261889 FMO4P31512 558 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 SCNN1GP51170 649 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 PRKAA2P54646 552 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 CLCQ05315 142 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 FRG1Q14331 258 aaKnown RBP12.94□□□□□ -0.34
SNX1-201ENST00000261889 TSNQ15631 228 aaKnown RBP12.94□□□□□ -0.34
SNX1-201ENST00000261889 CYBRD1Q53TN4 286 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 TAPT1Q6NXT6 567 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 CAMK1DQ8IU85 385 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 ARHGAP12Q8IWW6 846 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 KIAA2013Q8IYS2 634 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 RNF168Q8IYW5 571 aaPredicted RBP12.94□□□□□ -0.34
SNX1-201ENST00000261889 SNX19Q92543 992 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 ACDQ96AP0 544 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 GLT1D1Q96MS3 346 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 CHID1Q9BWS9 393 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 CFHR5Q9BXR6 569 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 TDRD1Q9BXT4 1180 aaKnown RBP12.94□□□□□ -0.34
SNX1-201ENST00000261889 PLK2Q9NYY3 685 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 MID2Q9UJV3 735 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 ACOX3O15254 700 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 DIRAS1O95057 198 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 IDUAP35475 653 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 PIGAP37287 484 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 HADHAP40939 763 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 OPRL1P41146 370 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 RPS9P46781 194 aaKnown RBP12.94□□□□□ -0.34
SNX1-201ENST00000261889 TM4SF4P48230 202 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 MADCAM1Q13477 382 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 ARL13BQ3SXY8 428 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 AGAP9Q5VTM2 703 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 RGMBQ6NW40 437 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 UNC93AQ86WB7 457 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 RBM12BQ8IXT5 1001 aaKnown RBP12.94□□□□□ -0.34
SNX1-201ENST00000261889 ZBTB8BQ8NAP8 495 aaPredicted RBP12.94□□□□□ -0.34
SNX1-201ENST00000261889 OR6J1Q8NGC5 347 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 CASP10Q92851 521 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 SLC10A4Q96EP9 437 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 AURKBQ96GD4 344 aaPredicted RBP12.94□□□□□ -0.34
SNX1-201ENST00000261889 MEAF6Q9HAF1 191 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 DAPK2Q9UIK4 370 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 PAIP2BQ9ULR5 123 aaKnown RBP12.94□□□□□ -0.34
SNX1-201ENST00000261889 COMMD10Q9Y6G5 202 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 ZSWIM8A7E2V4 1837 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 TMEM88BA6NKF7 163 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 UPK3BL1B0FP48 263 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 UPK3BL2E5RIL1 263 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 MAFKO60675 156 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 ITGB1P05556 798 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 APOA4P06727 396 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 NUP107P57740 925 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 ZNF678Q5SXM1 525 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 OR13J1Q8NGT2 312 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 BHMTQ93088 406 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 PSMG2Q969U7 264 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 MYLPFQ96A32 169 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 CARS2Q9HA77 564 aaKnown RBP12.94□□□□□ -0.34
SNX1-201ENST00000261889 PRM3Q9NNZ6 103 aa12.94□□□□□ -0.34
SNX1-201ENST00000261889 UXTQ9UBK9 157 aaPredicted RBP12.94□□□□□ -0.34
SNX1-201ENST00000261889 IPO11Q9UI26 975 aaKnown RBP12.94□□□□□ -0.34
SNX1-201ENST00000261889 A0A1W2PQ67 120 aa12.93□□□□□ -0.34
SNX1-201ENST00000261889 KANSL1LA0AUZ9 987 aa12.93□□□□□ -0.34
SNX1-201ENST00000261889 ASPDHA6ND91 283 aa12.93□□□□□ -0.34
SNX1-201ENST00000261889 INMTO95050 263 aa12.93□□□□□ -0.34
SNX1-201ENST00000261889 IGHA2P01877 340 aa12.93□□□□□ -0.34
SNX1-201ENST00000261889 HMOX2P30519 316 aa12.93□□□□□ -0.34
SNX1-201ENST00000261889 HALP42357 657 aa12.93□□□□□ -0.34
SNX1-201ENST00000261889 NFATC3Q12968 1075 aa12.93□□□□□ -0.34
SNX1-201ENST00000261889 SEMA3BQ13214 749 aa12.93□□□□□ -0.34
SNX1-201ENST00000261889 ZNF484Q5JVG2 852 aa12.93□□□□□ -0.34
SNX1-201ENST00000261889 R3HCC1LQ7Z5L2 792 aaKnown RBP12.93□□□□□ -0.34
SNX1-201ENST00000261889 DPP9Q86TI2 863 aa12.93□□□□□ -0.34
SNX1-201ENST00000261889 SLC22A15Q8IZD6 547 aa12.93□□□□□ -0.34
SNX1-201ENST00000261889 CFAP52Q8N1V2 620 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms