RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 TAF1P21675 1872 aa4.99□□□□□ -1.61
TRA2B-201ENST00000259043 A0A096LPK6 155 aa4.99□□□□□ -1.61
TRA2B-201ENST00000259043 A0A1B0GUV1 79 aa4.99□□□□□ -1.61
TRA2B-201ENST00000259043 PPIP5K2O43314 1243 aa4.99□□□□□ -1.61
TRA2B-201ENST00000259043 KIF1CO43896 1103 aaKnown RBP4.99□□□□□ -1.61
TRA2B-201ENST00000259043 GUCY1B2O75343 617 aa4.99□□□□□ -1.61
TRA2B-201ENST00000259043 ADAP00813 363 aa4.99□□□□□ -1.61
TRA2B-201ENST00000259043 SERPINC1P01008 464 aa4.99□□□□□ -1.61
TRA2B-201ENST00000259043 ATP1A3P13637 1013 aa4.99□□□□□ -1.61
TRA2B-201ENST00000259043 CD72P21854 359 aa4.99□□□□□ -1.61
TRA2B-201ENST00000259043 PSMC2P35998 433 aaKnown RBP4.99□□□□□ -1.61
TRA2B-201ENST00000259043 GPR12P47775 334 aa4.99□□□□□ -1.61
TRA2B-201ENST00000259043 CENPAP49450 140 aa4.99□□□□□ -1.61
TRA2B-201ENST00000259043 CLNS1AP54105 237 aaKnown RBP4.99□□□□□ -1.61
TRA2B-201ENST00000259043 NR1H2P55055 460 aa4.99□□□□□ -1.61
TRA2B-201ENST00000259043 TRAF2Q12933 501 aa4.99□□□□□ -1.61
TRA2B-201ENST00000259043 NCAPH2Q6IBW4 605 aa4.99□□□□□ -1.61
TRA2B-201ENST00000259043 LRRC8DQ7L1W4 858 aa4.99□□□□□ -1.61
TRA2B-201ENST00000259043 PATL1Q86TB9 770 aaKnown RBP4.99□□□□□ -1.61
TRA2B-201ENST00000259043 TBC1D1Q86TI0 1168 aaPredicted RBP4.99□□□□□ -1.61
TRA2B-201ENST00000259043 ANKRD44Q8N8A2 993 aa4.99□□□□□ -1.61
TRA2B-201ENST00000259043 CLSTN3Q9BQT9 956 aa4.99□□□□□ -1.61
TRA2B-201ENST00000259043 NPLQ9BXD5 320 aaPredicted RBP4.99□□□□□ -1.61
TRA2B-201ENST00000259043 PAIP1Q9H074 479 aaKnown RBP4.99□□□□□ -1.61
TRA2B-201ENST00000259043 CDT1Q9H211 546 aa4.99□□□□□ -1.61
TRA2B-201ENST00000259043 TBC1D22BQ9NU19 505 aa4.99□□□□□ -1.61
TRA2B-201ENST00000259043 LAS1LQ9Y4W2 734 aaKnown RBP4.99□□□□□ -1.61
TRA2B-201ENST00000259043 LRRC37AA6NMS7 1700 aa4.99□□□□□ -1.61
TRA2B-201ENST00000259043 ANKRD36CQ5JPF3 1778 aa4.99□□□□□ -1.61
TRA2B-201ENST00000259043 KDM3BQ7LBC6 1761 aa4.99□□□□□ -1.61
TRA2B-201ENST00000259043 ASTN2O75129 1339 aaPredicted RBP4.98□□□□□ -1.61
TRA2B-201ENST00000259043 CDHR2Q9BYE9 1310 aa4.98□□□□□ -1.61
TRA2B-201ENST00000259043 PSME4Q14997 1843 aa4.98□□□□□ -1.61
TRA2B-201ENST00000259043 A0A087X0M5 115 aa4.98□□□□□ -1.61
TRA2B-201ENST00000259043 IGLV5-52A0A0A0MRZ9 124 aa4.98□□□□□ -1.61
TRA2B-201ENST00000259043 A0A1B0GX30 115 aa4.98□□□□□ -1.61
TRA2B-201ENST00000259043 VWA3AA6NCI4 1184 aa4.98□□□□□ -1.61
TRA2B-201ENST00000259043 SRRM3A6NNA2 597 aaPredicted RBP4.98□□□□□ -1.61
TRA2B-201ENST00000259043 TCERG1O14776 1098 aaKnown RBP4.98□□□□□ -1.61
TRA2B-201ENST00000259043 ANP32CO43423 234 aa4.98□□□□□ -1.61
TRA2B-201ENST00000259043 HBP1O60381 514 aa4.98□□□□□ -1.61
TRA2B-201ENST00000259043 RNASEH2AO75792 299 aaKnown RBP4.98□□□□□ -1.61
TRA2B-201ENST00000259043 ZBTB11O95625 1053 aaPredicted RBP4.98□□□□□ -1.61
TRA2B-201ENST00000259043 TBX18O95935 607 aa4.98□□□□□ -1.61
TRA2B-201ENST00000259043 HNRNPA1P09651 372 aaKnown RBP eCLIP4.98□□□□□ -1.61
TRA2B-201ENST00000259043 CTPS1P17812 591 aa4.98□□□□□ -1.61
TRA2B-201ENST00000259043 PGM1P36871 562 aa4.98□□□□□ -1.61
TRA2B-201ENST00000259043 CASP6P55212 293 aa4.98□□□□□ -1.61
TRA2B-201ENST00000259043 FAM27E3Q08E93 113 aa4.98□□□□□ -1.61
TRA2B-201ENST00000259043 GRSF1Q12849 480 aaKnown RBP eCLIP4.98□□□□□ -1.61
TRA2B-201ENST00000259043 PLCB4Q15147 1175 aa4.98□□□□□ -1.61
TRA2B-201ENST00000259043 PKN2Q16513 984 aaKnown RBP4.98□□□□□ -1.61
TRA2B-201ENST00000259043 WDR45BQ5MNZ6 344 aa4.98□□□□□ -1.61
TRA2B-201ENST00000259043 SUSD4Q5VX71 490 aa4.98□□□□□ -1.61
TRA2B-201ENST00000259043 CFAP161Q6P656 301 aa4.98□□□□□ -1.61
TRA2B-201ENST00000259043 FBXO46Q6PJ61 603 aaPredicted RBP4.98□□□□□ -1.61
TRA2B-201ENST00000259043 PALB2Q86YC2 1186 aa4.98□□□□□ -1.61
TRA2B-201ENST00000259043 UCMAQ8WVF2 138 aa4.98□□□□□ -1.61
TRA2B-201ENST00000259043 LMLNQ96KR4 655 aa4.98□□□□□ -1.61
TRA2B-201ENST00000259043 C7orf26Q96N11 449 aa4.98□□□□□ -1.61
TRA2B-201ENST00000259043 SLC25A33Q9BSK2 321 aa4.98□□□□□ -1.61
TRA2B-201ENST00000259043 TTC12Q9H892 705 aaPredicted RBP4.98□□□□□ -1.61
TRA2B-201ENST00000259043 PANK3Q9H999 370 aa4.98□□□□□ -1.61
TRA2B-201ENST00000259043 ZNF556Q9HAH1 456 aa4.98□□□□□ -1.61
TRA2B-201ENST00000259043 CNOT7Q9UIV1 285 aaKnown RBP4.98□□□□□ -1.61
TRA2B-201ENST00000259043 COL4A1P02462 1669 aa4.98□□□□□ -1.61
TRA2B-201ENST00000259043 UNC80Q8N2C7 3258 aa4.98□□□□□ -1.61
TRA2B-201ENST00000259043 CLSPNQ9HAW4 1339 aa4.97□□□□□ -1.61
TRA2B-201ENST00000259043 IBTKQ9P2D0 1353 aaPredicted RBP4.97□□□□□ -1.61
TRA2B-201ENST00000259043 ANKRD18BA2A2Z9 1011 aa4.97□□□□□ -1.61
TRA2B-201ENST00000259043 FAM90A7PA6NKC0 464 aa4.97□□□□□ -1.61
TRA2B-201ENST00000259043 IFITM10A6NMD0 228 aa4.97□□□□□ -1.61
TRA2B-201ENST00000259043 FAM90A22PA8MWA6 464 aa4.97□□□□□ -1.61
TRA2B-201ENST00000259043 FAM90A12PA8MX19 464 aa4.97□□□□□ -1.61
TRA2B-201ENST00000259043 FAM90A23PA8MXZ1 464 aa4.97□□□□□ -1.61
TRA2B-201ENST00000259043 BTBD18B2RXH4 712 aa4.97□□□□□ -1.61
TRA2B-201ENST00000259043 ITM2AO43736 263 aa4.97□□□□□ -1.61
TRA2B-201ENST00000259043 IL1AP01583 271 aa4.97□□□□□ -1.61
TRA2B-201ENST00000259043 TTKP33981 857 aa4.97□□□□□ -1.61
TRA2B-201ENST00000259043 MXI1P50539 228 aa4.97□□□□□ -1.61
TRA2B-201ENST00000259043 RRP1P56182 461 aaKnown RBP4.97□□□□□ -1.61
TRA2B-201ENST00000259043 TBL3Q12788 808 aaKnown RBP4.97□□□□□ -1.61
TRA2B-201ENST00000259043 PRKG2Q13237 762 aa4.97□□□□□ -1.61
TRA2B-201ENST00000259043 GPR68Q15743 365 aa4.97□□□□□ -1.61
TRA2B-201ENST00000259043 SLC18A3Q16572 532 aa4.97□□□□□ -1.61
TRA2B-201ENST00000259043 BAK1Q16611 211 aa4.97□□□□□ -1.61
TRA2B-201ENST00000259043 ACAD10Q6JQN1 1059 aa4.97□□□□□ -1.61
TRA2B-201ENST00000259043 MOB2Q70IA6 237 aa4.97□□□□□ -1.61
TRA2B-201ENST00000259043 CREB3L2Q70SY1 520 aa4.97□□□□□ -1.61
TRA2B-201ENST00000259043 FJX1Q86VR8 437 aa4.97□□□□□ -1.61
TRA2B-201ENST00000259043 ARMC8Q8IUR7 673 aa4.97□□□□□ -1.61
TRA2B-201ENST00000259043 CCDC89Q8N998 374 aa4.97□□□□□ -1.61
TRA2B-201ENST00000259043 ZMIZ2Q8NF64 920 aa4.97□□□□□ -1.61
TRA2B-201ENST00000259043 TMED6Q8WW62 240 aa4.97□□□□□ -1.61
TRA2B-201ENST00000259043 ZUFSPQ96AP4 578 aa4.97□□□□□ -1.61
TRA2B-201ENST00000259043 FIZ1Q96SL8 496 aa4.97□□□□□ -1.61
TRA2B-201ENST00000259043 LMAN2LQ9H0V9 348 aa4.97□□□□□ -1.61
TRA2B-201ENST00000259043 PDCL3Q9H2J4 239 aa4.97□□□□□ -1.61
TRA2B-201ENST00000259043 BLOC1S4Q9NUP1 217 aa4.97□□□□□ -1.61
TRA2B-201ENST00000259043 AASSQ9UDR5 926 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms