RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 EIF2B4Q9UI10 523 aaKnown RBP13.46□□□□□ -0.25
VHL-201ENST00000256474 A0A0C4DFX4 3053 aa13.46□□□□□ -0.26
VHL-201ENST00000256474 PSMD7P51665 324 aa13.46□□□□□ -0.26
VHL-201ENST00000256474 HERVK_113P63132 956 aa13.46□□□□□ -0.26
VHL-201ENST00000256474 CLCQ05315 142 aa13.46□□□□□ -0.26
VHL-201ENST00000256474 TAF10Q12962 218 aa13.46□□□□□ -0.26
VHL-201ENST00000256474 MS4A13Q5J8X5 152 aa13.46□□□□□ -0.26
VHL-201ENST00000256474 LDLRAD1Q5T700 205 aa13.46□□□□□ -0.26
VHL-201ENST00000256474 TAF2Q6P1X5 1199 aa13.46□□□□□ -0.26
VHL-201ENST00000256474 XKR5Q6UX68 686 aa13.46□□□□□ -0.26
VHL-201ENST00000256474 ZNF598Q86UK7 904 aaKnown RBP13.46□□□□□ -0.26
VHL-201ENST00000256474 PELI3Q8N2H9 469 aa13.46□□□□□ -0.26
VHL-201ENST00000256474 FIBCD1Q8N539 461 aa13.46□□□□□ -0.26
VHL-201ENST00000256474 SIDT2Q8NBJ9 832 aaKnown RBP13.46□□□□□ -0.26
VHL-201ENST00000256474 OR4L1Q8NH43 312 aa13.46□□□□□ -0.26
VHL-201ENST00000256474 SKA2Q8WVK7 121 aaPredicted RBP13.46□□□□□ -0.26
VHL-201ENST00000256474 ADI1Q9BV57 179 aa13.46□□□□□ -0.26
VHL-201ENST00000256474 ERVK-6Q9BXR3 956 aa13.46□□□□□ -0.26
VHL-201ENST00000256474 PNPLA3Q9NST1 481 aa13.46□□□□□ -0.26
VHL-201ENST00000256474 EXD2Q9NVH0 621 aa13.46□□□□□ -0.26
VHL-201ENST00000256474 INTS7Q9NVH2 962 aaKnown RBP13.46□□□□□ -0.26
VHL-201ENST00000256474 OR4F21O95013 312 aa13.45□□□□□ -0.26
VHL-201ENST00000256474 CDK4P11802 303 aa13.45□□□□□ -0.26
VHL-201ENST00000256474 IST1P53990 364 aa13.45□□□□□ -0.26
VHL-201ENST00000256474 LIPEQ05469 1076 aa13.45□□□□□ -0.26
VHL-201ENST00000256474 XKR4Q5GH76 650 aa13.45□□□□□ -0.26
VHL-201ENST00000256474 BRMS1LQ5PSV4 323 aa13.45□□□□□ -0.26
VHL-201ENST00000256474 KDELC1Q6UW63 502 aa13.45□□□□□ -0.26
VHL-201ENST00000256474 CMTR2Q8IYT2 770 aaKnown RBP13.45□□□□□ -0.26
VHL-201ENST00000256474 PGBD5Q8N414 524 aa13.45□□□□□ -0.26
VHL-201ENST00000256474 C2orf69Q8N8R5 385 aa13.45□□□□□ -0.26
VHL-201ENST00000256474 CLHC1Q8NHS4 586 aa13.45□□□□□ -0.26
VHL-201ENST00000256474 FIG4Q92562 907 aa13.45□□□□□ -0.26
VHL-201ENST00000256474 CCSER2Q9H7U1 834 aa13.45□□□□□ -0.26
VHL-201ENST00000256474 CLK4Q9HAZ1 481 aaKnown RBP13.45□□□□□ -0.26
VHL-201ENST00000256474 LTB4R2Q9NPC1 389 aa13.45□□□□□ -0.26
VHL-201ENST00000256474 SMPD4Q9NXE4 827 aa13.45□□□□□ -0.26
VHL-201ENST00000256474 MAP10Q9P2G4 905 aa13.45□□□□□ -0.26
VHL-201ENST00000256474 HCSTQ9UBK5 93 aa13.45□□□□□ -0.26
VHL-201ENST00000256474 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.45□□□□□ -0.26
VHL-201ENST00000256474 U3KQV3 271 aa13.45□□□□□ -0.26
VHL-201ENST00000256474 GOLGA4Q13439 2230 aaKnown RBP13.45□□□□□ -0.26
VHL-201ENST00000256474 CCDC154A6NI56 674 aa13.45□□□□□ -0.26
VHL-201ENST00000256474 ARPC2O15144 300 aa13.45□□□□□ -0.26
VHL-201ENST00000256474 SNAP29O95721 258 aa13.45□□□□□ -0.26
VHL-201ENST00000256474 CTXN3Q4LDR2 81 aa13.45□□□□□ -0.26
VHL-201ENST00000256474 FAM171A1Q5VUB5 890 aa13.45□□□□□ -0.26
VHL-201ENST00000256474 SLC2A7Q6PXP3 512 aa13.45□□□□□ -0.26
VHL-201ENST00000256474 FRA10AC1Q70Z53 315 aa13.45□□□□□ -0.26
VHL-201ENST00000256474 LARP4Q71RC2 724 aaKnown RBP eCLIP13.45□□□□□ -0.26
VHL-201ENST00000256474 GLT6D1Q7Z4J2 308 aa13.45□□□□□ -0.26
VHL-201ENST00000256474 ANKRD23Q86SG2 305 aa13.45□□□□□ -0.26
VHL-201ENST00000256474 STK32CQ86UX6 486 aa13.45□□□□□ -0.26
VHL-201ENST00000256474 CDC26Q8NHZ8 85 aa13.45□□□□□ -0.26
VHL-201ENST00000256474 PGAP3Q96FM1 320 aaPredicted RBP13.45□□□□□ -0.26
VHL-201ENST00000256474 TSGA13Q96PP4 275 aa13.45□□□□□ -0.26
VHL-201ENST00000256474 NAA50Q9GZZ1 169 aaKnown RBP13.45□□□□□ -0.26
VHL-201ENST00000256474 CMTM6Q9NX76 183 aa13.45□□□□□ -0.26
VHL-201ENST00000256474 FADS3Q9Y5Q0 445 aa13.45□□□□□ -0.26
VHL-201ENST00000256474 CEPT1Q9Y6K0 416 aa13.45□□□□□ -0.26
VHL-201ENST00000256474 CNPP09543 421 aaKnown RBP13.44□□□□□ -0.26
VHL-201ENST00000256474 RPS24P62847 133 aaKnown RBP13.44□□□□□ -0.26
VHL-201ENST00000256474 HPCAP84074 193 aa13.44□□□□□ -0.26
VHL-201ENST00000256474 TRIM32Q13049 653 aa13.44□□□□□ -0.26
VHL-201ENST00000256474 LAPTM5Q13571 262 aa13.44□□□□□ -0.26
VHL-201ENST00000256474 PAGE3Q5JUK9 113 aa13.44□□□□□ -0.26
VHL-201ENST00000256474 ANKS6Q68DC2 871 aa13.44□□□□□ -0.26
VHL-201ENST00000256474 USP50Q70EL3 339 aaPredicted RBP13.44□□□□□ -0.26
VHL-201ENST00000256474 CHERPQ8IWX8 916 aaKnown RBP13.44□□□□□ -0.26
VHL-201ENST00000256474 NCLNQ969V3 563 aa13.44□□□□□ -0.26
VHL-201ENST00000256474 LRRC58Q96CX6 371 aa13.44□□□□□ -0.26
VHL-201ENST00000256474 MTG1Q9BT17 334 aaPredicted RBP13.44□□□□□ -0.26
VHL-201ENST00000256474 ZFP14Q9HCL3 533 aa13.44□□□□□ -0.26
VHL-201ENST00000256474 GID8Q9NWU2 228 aa13.44□□□□□ -0.26
VHL-201ENST00000256474 KLHL33A6NCF5 533 aa13.44□□□□□ -0.26
VHL-201ENST00000256474 B4GALT3O60512 393 aa13.44□□□□□ -0.26
VHL-201ENST00000256474 CHEK2O96017 543 aa13.44□□□□□ -0.26
VHL-201ENST00000256474 ADSLP30566 484 aaPredicted RBP13.44□□□□□ -0.26
VHL-201ENST00000256474 LEPRP48357 1165 aaKnown RBP13.44□□□□□ -0.26
VHL-201ENST00000256474 PIGFQ07326 219 aa13.44□□□□□ -0.26
VHL-201ENST00000256474 DCTN2Q13561 401 aaKnown RBP13.44□□□□□ -0.26
VHL-201ENST00000256474 NR6A1Q15406 480 aa13.44□□□□□ -0.26
VHL-201ENST00000256474 IMPG1Q17R60 797 aa13.44□□□□□ -0.26
VHL-201ENST00000256474 FAM45BPQ6NSW5 357 aa13.44□□□□□ -0.26
VHL-201ENST00000256474 TMEM26Q6ZUK4 368 aa13.44□□□□□ -0.26
VHL-201ENST00000256474 FAM45AQ8TCE6 357 aa13.44□□□□□ -0.26
VHL-201ENST00000256474 IMP4Q96G21 291 aaKnown RBP13.44□□□□□ -0.26
VHL-201ENST00000256474 EGFL8Q99944 293 aa13.44□□□□□ -0.26
VHL-201ENST00000256474 MUC3BQ9H195 1237 aa13.44□□□□□ -0.26
VHL-201ENST00000256474 TUBB1Q9H4B7 451 aa13.44□□□□□ -0.26
VHL-201ENST00000256474 ZNF696Q9H7X3 374 aa13.44□□□□□ -0.26
VHL-201ENST00000256474 SPC25Q9HBM1 224 aa13.44□□□□□ -0.26
VHL-201ENST00000256474 OLAHQ9NV23 265 aa13.44□□□□□ -0.26
VHL-201ENST00000256474 HACD3Q9P035 362 aa13.44□□□□□ -0.26
VHL-201ENST00000256474 A0A1W2PPW3 197 aa13.44□□□□□ -0.26
VHL-201ENST00000256474 KANSL1LA0AUZ9 987 aa13.44□□□□□ -0.26
VHL-201ENST00000256474 ZBBXA8MT70 800 aa13.44□□□□□ -0.26
VHL-201ENST00000256474 SERPINF2P08697 491 aa13.44□□□□□ -0.26
VHL-201ENST00000256474 CD1DP15813 335 aa13.44□□□□□ -0.26
VHL-201ENST00000256474 CTPS1P17812 591 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms