RNA–Protein interactions for RNA: ENST00000249116.6

APOBEC3A-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-201ENST00000249116 TRA2AQ13595 282 aaKnown RBP eCLIP12.85□□□□□ -0.35
APOBEC3A-201ENST00000249116 LRRC66Q68CR7 880 aa12.85□□□□□ -0.35
APOBEC3A-201ENST00000249116 ADAMTSL4Q6UY14 1074 aa12.85□□□□□ -0.35
APOBEC3A-201ENST00000249116 ZNF765Q7L2R6 523 aa12.85□□□□□ -0.35
APOBEC3A-201ENST00000249116 NLRP8Q86W28 1048 aa12.85□□□□□ -0.35
APOBEC3A-201ENST00000249116 NAGSQ8N159 534 aa12.85□□□□□ -0.35
APOBEC3A-201ENST00000249116 CCDC112Q8NEF3 446 aa12.85□□□□□ -0.35
APOBEC3A-201ENST00000249116 BTBD6Q96KE9 485 aa12.85□□□□□ -0.35
APOBEC3A-201ENST00000249116 NUDT22Q9BRQ3 303 aa12.85□□□□□ -0.35
APOBEC3A-201ENST00000249116 ZMYND15Q9H091 742 aa12.85□□□□□ -0.35
APOBEC3A-201ENST00000249116 AMACRQ9UHK6 382 aa12.85□□□□□ -0.35
APOBEC3A-201ENST00000249116 CD84Q9UIB8 345 aa12.85□□□□□ -0.35
APOBEC3A-201ENST00000249116 HEMK1Q9Y5R4 338 aaPredicted RBP12.85□□□□□ -0.35
APOBEC3A-201ENST00000249116 KIF26BQ2KJY2 2108 aa12.84□□□□□ -0.35
APOBEC3A-201ENST00000249116 IGHV5-10-1A0A0J9YXX1 117 aa12.84□□□□□ -0.35
APOBEC3A-201ENST00000249116 A0A0J9YYE9 177 aa12.84□□□□□ -0.35
APOBEC3A-201ENST00000249116 STMND1H3BQB6 276 aa12.84□□□□□ -0.35
APOBEC3A-201ENST00000249116 MATN3O15232 486 aa12.84□□□□□ -0.35
APOBEC3A-201ENST00000249116 SLC28A2O43868 658 aa12.84□□□□□ -0.35
APOBEC3A-201ENST00000249116 TRBC1P01850 177 aa12.84□□□□□ -0.35
APOBEC3A-201ENST00000249116 H2AFZP0C0S5 128 aa12.84□□□□□ -0.35
APOBEC3A-201ENST00000249116 TMEM253P0C7T8 217 aa12.84□□□□□ -0.35
APOBEC3A-201ENST00000249116 SFTPCP11686 197 aa12.84□□□□□ -0.35
APOBEC3A-201ENST00000249116 CD1CP29017 333 aa12.84□□□□□ -0.35
APOBEC3A-201ENST00000249116 GARSP41250 739 aaKnown RBP12.84□□□□□ -0.35
APOBEC3A-201ENST00000249116 PPM1FP49593 454 aaPredicted RBP12.84□□□□□ -0.35
APOBEC3A-201ENST00000249116 ATP1A2P50993 1020 aa12.84□□□□□ -0.35
APOBEC3A-201ENST00000249116 LIMK2P53671 638 aa12.84□□□□□ -0.35
APOBEC3A-201ENST00000249116 MMRN1Q13201 1228 aa12.84□□□□□ -0.35
APOBEC3A-201ENST00000249116 SRSF6Q13247 344 aaKnown RBP12.84□□□□□ -0.35
APOBEC3A-201ENST00000249116 LRP8Q14114 963 aa12.84□□□□□ -0.35
APOBEC3A-201ENST00000249116 PTPRRQ15256 657 aa12.84□□□□□ -0.35
APOBEC3A-201ENST00000249116 IFI16Q16666 785 aaKnown RBP12.84□□□□□ -0.35
APOBEC3A-201ENST00000249116 ZNF574Q6ZN55 896 aaPredicted RBP12.84□□□□□ -0.35
APOBEC3A-201ENST00000249116 H2AFVQ71UI9 128 aa12.84□□□□□ -0.35
APOBEC3A-201ENST00000249116 VASH2Q86V25 355 aa12.84□□□□□ -0.35
APOBEC3A-201ENST00000249116 DTX1Q86Y01 620 aa12.84□□□□□ -0.35
APOBEC3A-201ENST00000249116 GALNT13Q8IUC8 556 aa12.84□□□□□ -0.35
APOBEC3A-201ENST00000249116 RAVER1Q8IY67 606 aaKnown RBP12.84□□□□□ -0.35
APOBEC3A-201ENST00000249116 AGBL5Q8NDL9 886 aa12.84□□□□□ -0.35
APOBEC3A-201ENST00000249116 RCBTB1Q8NDN9 531 aa12.84□□□□□ -0.35
APOBEC3A-201ENST00000249116 OR4D9Q8NGE8 314 aa12.84□□□□□ -0.35
APOBEC3A-201ENST00000249116 EXD1Q8NHP7 514 aa12.84□□□□□ -0.35
APOBEC3A-201ENST00000249116 PTCD2Q8WV60 388 aaKnown RBP12.84□□□□□ -0.35
APOBEC3A-201ENST00000249116 PATE1Q8WXA2 126 aa12.84□□□□□ -0.35
APOBEC3A-201ENST00000249116 CTNNBL1Q8WYA6 563 aaPredicted RBP12.84□□□□□ -0.35
APOBEC3A-201ENST00000249116 SCARF2Q96GP6 870 aaPredicted RBP12.84□□□□□ -0.35
APOBEC3A-201ENST00000249116 CCDC74BQ96LY2 380 aa12.84□□□□□ -0.35
APOBEC3A-201ENST00000249116 TAAR9Q96RI9 348 aa12.84□□□□□ -0.35
APOBEC3A-201ENST00000249116 FAM117AQ9C073 453 aa12.84□□□□□ -0.35
APOBEC3A-201ENST00000249116 GRPEL1Q9HAV7 217 aa12.84□□□□□ -0.35
APOBEC3A-201ENST00000249116 KCNK4Q9NYG8 393 aa12.84□□□□□ -0.35
APOBEC3A-201ENST00000249116 TMEM98Q9Y2Y6 226 aa12.84□□□□□ -0.35
APOBEC3A-201ENST00000249116 PCDHGA4Q9Y5G9 962 aa12.84□□□□□ -0.35
APOBEC3A-201ENST00000249116 IGHV1OR21-1A0A087WYE8 117 aa12.83□□□□□ -0.36
APOBEC3A-201ENST00000249116 GOLGA6L3A6NEY3 463 aa12.83□□□□□ -0.36
APOBEC3A-201ENST00000249116 SOWAHDA6NJG2 315 aa12.83□□□□□ -0.36
APOBEC3A-201ENST00000249116 GOLGA6L6A8MZA4 724 aa12.83□□□□□ -0.36
APOBEC3A-201ENST00000249116 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.83□□□□□ -0.36
APOBEC3A-201ENST00000249116 PPM1DO15297 605 aa12.83□□□□□ -0.36
APOBEC3A-201ENST00000249116 MFSD11O43934 449 aa12.83□□□□□ -0.36
APOBEC3A-201ENST00000249116 ASMTLO95671 621 aa12.83□□□□□ -0.36
APOBEC3A-201ENST00000249116 CCL4P13236 92 aa12.83□□□□□ -0.36
APOBEC3A-201ENST00000249116 IL4RP24394 825 aa12.83□□□□□ -0.36
APOBEC3A-201ENST00000249116 CCNCP24863 283 aa12.83□□□□□ -0.36
APOBEC3A-201ENST00000249116 CSTF2P33240 577 aaKnown RBP eCLIP12.83□□□□□ -0.36
APOBEC3A-201ENST00000249116 GJC1P36383 396 aa12.83□□□□□ -0.36
APOBEC3A-201ENST00000249116 GPLD1P80108 840 aa12.83□□□□□ -0.36
APOBEC3A-201ENST00000249116 PTSQ03393 145 aa12.83□□□□□ -0.36
APOBEC3A-201ENST00000249116 GALNT2Q10471 571 aa12.83□□□□□ -0.36
APOBEC3A-201ENST00000249116 SQSTM1Q13501 440 aa12.83□□□□□ -0.36
APOBEC3A-201ENST00000249116 PAFAH1B3Q15102 231 aaKnown RBP12.83□□□□□ -0.36
APOBEC3A-201ENST00000249116 LINC00303Q3SY05 128 aa12.83□□□□□ -0.36
APOBEC3A-201ENST00000249116 PYCR3Q53H96 274 aa12.83□□□□□ -0.36
APOBEC3A-201ENST00000249116 NCBP2-AS2Q69YL0 99 aa12.83□□□□□ -0.36
APOBEC3A-201ENST00000249116 ALG1LQ6GMV1 187 aa12.83□□□□□ -0.36
APOBEC3A-201ENST00000249116 MARK2Q7KZI7 788 aaKnown RBP12.83□□□□□ -0.36
APOBEC3A-201ENST00000249116 MAP7D3Q8IWC1 876 aa12.83□□□□□ -0.36
APOBEC3A-201ENST00000249116 CCDC170Q8IYT3 715 aa12.83□□□□□ -0.36
APOBEC3A-201ENST00000249116 NRSN1Q8IZ57 195 aa12.83□□□□□ -0.36
APOBEC3A-201ENST00000249116 EXD3Q8N9H8 876 aa12.83□□□□□ -0.36
APOBEC3A-201ENST00000249116 KCTD6Q8NC69 237 aa12.83□□□□□ -0.36
APOBEC3A-201ENST00000249116 ZNF564Q8TBZ8 553 aaPredicted RBP12.83□□□□□ -0.36
APOBEC3A-201ENST00000249116 FAM71BQ8TC56 605 aa12.83□□□□□ -0.36
APOBEC3A-201ENST00000249116 MAML1Q92585 1016 aa12.83□□□□□ -0.36
APOBEC3A-201ENST00000249116 EXTL1Q92935 676 aa12.83□□□□□ -0.36
APOBEC3A-201ENST00000249116 SCAMP4Q969E2 229 aa12.83□□□□□ -0.36
APOBEC3A-201ENST00000249116 AHCYL2Q96HN2 611 aaKnown RBP12.83□□□□□ -0.36
APOBEC3A-201ENST00000249116 STN1Q9H668 368 aaKnown RBP12.83□□□□□ -0.36
APOBEC3A-201ENST00000249116 RBM22Q9NW64 420 aaKnown RBP eCLIP12.83□□□□□ -0.36
APOBEC3A-201ENST00000249116 UVRAGQ9P2Y5 699 aa12.83□□□□□ -0.36
APOBEC3A-201ENST00000249116 TTLL3Q9Y4R7 772 aa12.83□□□□□ -0.36
APOBEC3A-201ENST00000249116 ST14Q9Y5Y6 855 aa12.83□□□□□ -0.36
APOBEC3A-201ENST00000249116 A0A0U1RQS6 177 aa12.82□□□□□ -0.36
APOBEC3A-201ENST00000249116 LCA5LO95447 670 aa12.82□□□□□ -0.36
APOBEC3A-201ENST00000249116 SOD1P00441 154 aa12.82□□□□□ -0.36
APOBEC3A-201ENST00000249116 CD48P09326 243 aa12.82□□□□□ -0.36
APOBEC3A-201ENST00000249116 CYLC1P35663 651 aaPredicted RBP12.82□□□□□ -0.36
APOBEC3A-201ENST00000249116 STC1P52823 247 aa12.82□□□□□ -0.36
APOBEC3A-201ENST00000249116 RPL26P61254 145 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms