RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 PEX13Q92968 403 aa14.34□□□□□ -0.11
HIF3A-202ENST00000244303 PPWD1Q96BP3 646 aaKnown RBP14.34□□□□□ -0.11
HIF3A-202ENST00000244303 UHRF1Q96T88 793 aaPredicted RBP14.34□□□□□ -0.11
HIF3A-202ENST00000244303 AARSD1Q9BTE6 412 aaKnown RBP14.34□□□□□ -0.11
HIF3A-202ENST00000244303 RBM38Q9H0Z9 239 aaKnown RBP14.34□□□□□ -0.11
HIF3A-202ENST00000244303 TUBB1Q9H4B7 451 aa14.34□□□□□ -0.11
HIF3A-202ENST00000244303 POPDC3Q9HBV1 291 aa14.34□□□□□ -0.11
HIF3A-202ENST00000244303 HACD3Q9P035 362 aa14.34□□□□□ -0.11
HIF3A-202ENST00000244303 RNF11Q9Y3C5 154 aa14.34□□□□□ -0.11
HIF3A-202ENST00000244303 A0A1B0GTL3 188 aa14.34□□□□□ -0.11
HIF3A-202ENST00000244303 UBA6A0AVT1 1052 aaPredicted RBP14.34□□□□□ -0.11
HIF3A-202ENST00000244303 FAM92AA1XBS5 289 aa14.34□□□□□ -0.11
HIF3A-202ENST00000244303 NME4O00746 187 aa14.34□□□□□ -0.11
HIF3A-202ENST00000244303 CLASP2O75122 1294 aaKnown RBP14.34□□□□□ -0.11
HIF3A-202ENST00000244303 OGNP20774 298 aaKnown RBP14.34□□□□□ -0.11
HIF3A-202ENST00000244303 CAPN3P20807 821 aa14.34□□□□□ -0.11
HIF3A-202ENST00000244303 HOXD10P28358 340 aa14.34□□□□□ -0.11
HIF3A-202ENST00000244303 ARPP19P56211 112 aa14.34□□□□□ -0.11
HIF3A-202ENST00000244303 YBEYP58557 167 aaPredicted RBP14.34□□□□□ -0.11
HIF3A-202ENST00000244303 VPS26BQ4G0F5 336 aa14.34□□□□□ -0.11
HIF3A-202ENST00000244303 CTXN3Q4LDR2 81 aa14.34□□□□□ -0.11
HIF3A-202ENST00000244303 FBXO48Q5FWF7 155 aa14.34□□□□□ -0.11
HIF3A-202ENST00000244303 NADSYN1Q6IA69 706 aa14.34□□□□□ -0.11
HIF3A-202ENST00000244303 MYO1HQ8N1T3 1032 aa14.34□□□□□ -0.11
HIF3A-202ENST00000244303 SLC43A3Q8NBI5 491 aa14.34□□□□□ -0.11
HIF3A-202ENST00000244303 CANT1Q8WVQ1 401 aa14.34□□□□□ -0.11
HIF3A-202ENST00000244303 B3GALT6Q96L58 329 aa14.34□□□□□ -0.11
HIF3A-202ENST00000244303 GPATCH1Q9BRR8 931 aaKnown RBP14.34□□□□□ -0.11
HIF3A-202ENST00000244303 TSEN34Q9BSV6 310 aaKnown RBP14.34□□□□□ -0.11
HIF3A-202ENST00000244303 TLR8Q9NR97 1041 aaKnown RBP14.34□□□□□ -0.11
HIF3A-202ENST00000244303 OLA1Q9NTK5 396 aaKnown RBP14.34□□□□□ -0.11
HIF3A-202ENST00000244303 BTRCQ9Y297 605 aa14.34□□□□□ -0.11
HIF3A-202ENST00000244303 SLC27A5Q9Y2P5 690 aa14.34□□□□□ -0.11
HIF3A-202ENST00000244303 A0A0D9SEW6 157 aa14.33□□□□□ -0.12
HIF3A-202ENST00000244303 A0A1W2PQ45 241 aaPredicted RBP14.33□□□□□ -0.12
HIF3A-202ENST00000244303 A0A1W2PQY0 241 aa14.33□□□□□ -0.12
HIF3A-202ENST00000244303 PDLIM1O00151 329 aa14.33□□□□□ -0.12
HIF3A-202ENST00000244303 STAMBPO95630 424 aa14.33□□□□□ -0.12
HIF3A-202ENST00000244303 IGLV3-27P01718 113 aa14.33□□□□□ -0.12
HIF3A-202ENST00000244303 HSPA8P11142 646 aaKnown RBP14.33□□□□□ -0.12
HIF3A-202ENST00000244303 HOXB8P17481 243 aaPredicted RBP14.33□□□□□ -0.12
HIF3A-202ENST00000244303 MAGEA11P43364 429 aa14.33□□□□□ -0.12
HIF3A-202ENST00000244303 TXNL4AP83876 142 aaKnown RBP14.33□□□□□ -0.12
HIF3A-202ENST00000244303 CYTH1Q15438 398 aa14.33□□□□□ -0.12
HIF3A-202ENST00000244303 TBC1D25Q3MII6 688 aa14.33□□□□□ -0.12
HIF3A-202ENST00000244303 CFAP52Q8N1V2 620 aa14.33□□□□□ -0.12
HIF3A-202ENST00000244303 MIER2Q8N344 545 aa14.33□□□□□ -0.12
HIF3A-202ENST00000244303 OR2T34Q8NGX1 318 aa14.33□□□□□ -0.12
HIF3A-202ENST00000244303 OR2T3Q8NH03 318 aa14.33□□□□□ -0.12
HIF3A-202ENST00000244303 ZFP28Q8NHY6 868 aa14.33□□□□□ -0.12
HIF3A-202ENST00000244303 RAET1EQ8TD07 263 aa14.33□□□□□ -0.12
HIF3A-202ENST00000244303 CDKN2AIPNLQ96HQ2 116 aa14.33□□□□□ -0.12
HIF3A-202ENST00000244303 EFHD1Q9BUP0 239 aa14.33□□□□□ -0.12
HIF3A-202ENST00000244303 OSBPL11Q9BXB4 747 aa14.33□□□□□ -0.12
HIF3A-202ENST00000244303 TFB2MQ9H5Q4 396 aaKnown RBP14.33□□□□□ -0.12
HIF3A-202ENST00000244303 PDFQ9HBH1 243 aa14.33□□□□□ -0.12
HIF3A-202ENST00000244303 FAM50BQ9Y247 325 aa14.33□□□□□ -0.12
HIF3A-202ENST00000244303 NDUFAF1Q9Y375 327 aa14.33□□□□□ -0.12
HIF3A-202ENST00000244303 SUPT3HB4E1H0 165 aa14.32□□□□□ -0.12
HIF3A-202ENST00000244303 SUPT3HO75486 399 aa14.32□□□□□ -0.12
HIF3A-202ENST00000244303 EPOP01588 193 aa14.32□□□□□ -0.12
HIF3A-202ENST00000244303 SERPINF2P08697 491 aa14.32□□□□□ -0.12
HIF3A-202ENST00000244303 LINC00032P0C843 101 aa14.32□□□□□ -0.12
HIF3A-202ENST00000244303 CKMT2P17540 419 aa14.32□□□□□ -0.12
HIF3A-202ENST00000244303 EEF1DP29692 281 aaKnown RBP14.32□□□□□ -0.12
HIF3A-202ENST00000244303 MAPKAPK2P49137 400 aa14.32□□□□□ -0.12
HIF3A-202ENST00000244303 TYSND1Q2T9J0 566 aa14.32□□□□□ -0.12
HIF3A-202ENST00000244303 PAQR3Q6TCH7 311 aa14.32□□□□□ -0.12
HIF3A-202ENST00000244303 TUBGCP3Q96CW5 907 aa14.32□□□□□ -0.12
HIF3A-202ENST00000244303 SLC45A3Q96JT2 553 aa14.32□□□□□ -0.12
HIF3A-202ENST00000244303 CCSER2Q9H7U1 834 aa14.32□□□□□ -0.12
HIF3A-202ENST00000244303 SEMA4BQ9NPR2 832 aaPredicted RBP14.32□□□□□ -0.12
HIF3A-202ENST00000244303 STARD7Q9NQZ5 370 aa14.32□□□□□ -0.12
HIF3A-202ENST00000244303 TMEM161AQ9NX61 479 aa14.32□□□□□ -0.12
HIF3A-202ENST00000244303 PTTG2Q9NZH5 202 aa14.32□□□□□ -0.12
HIF3A-202ENST00000244303 POLG2Q9UHN1 485 aa14.32□□□□□ -0.12
HIF3A-202ENST00000244303 IKZF3Q9UKT9 509 aa14.32□□□□□ -0.12
HIF3A-202ENST00000244303 PHF24Q9UPV7 400 aa14.32□□□□□ -0.12
HIF3A-202ENST00000244303 ZFC3H1O60293 1989 aaKnown RBP14.32□□□□□ -0.12
HIF3A-202ENST00000244303 HTTP42858 3142 aa14.32□□□□□ -0.12
HIF3A-202ENST00000244303 CROCCQ5TZA2 2017 aa14.32□□□□□ -0.12
HIF3A-202ENST00000244303 SYN3O14994 580 aa14.32□□□□□ -0.12
HIF3A-202ENST00000244303 ANGPT2O15123 496 aa14.32□□□□□ -0.12
HIF3A-202ENST00000244303 AKAP10O43572 662 aa14.32□□□□□ -0.12
HIF3A-202ENST00000244303 RHOBTB1O94844 696 aa14.32□□□□□ -0.12
HIF3A-202ENST00000244303 ASLP04424 464 aa14.32□□□□□ -0.12
HIF3A-202ENST00000244303 HGFP14210 728 aa14.32□□□□□ -0.12
HIF3A-202ENST00000244303 NELFEP18615 380 aaKnown RBP14.32□□□□□ -0.12
HIF3A-202ENST00000244303 TACR2P21452 398 aa14.32□□□□□ -0.12
HIF3A-202ENST00000244303 FMO4P31512 558 aa14.32□□□□□ -0.12
HIF3A-202ENST00000244303 YBX1P67809 324 aaKnown RBP14.32□□□□□ -0.12
HIF3A-202ENST00000244303 CLCQ05315 142 aa14.32□□□□□ -0.12
HIF3A-202ENST00000244303 ILF2Q12905 390 aaKnown RBP14.32□□□□□ -0.12
HIF3A-202ENST00000244303 CAPRIN1Q14444 709 aaKnown RBP14.32□□□□□ -0.12
HIF3A-202ENST00000244303 SETMARQ53H47 684 aaPredicted RBP14.32□□□□□ -0.12
HIF3A-202ENST00000244303 LHX8Q68G74 356 aa14.32□□□□□ -0.12
HIF3A-202ENST00000244303 CARM1Q86X55 608 aa14.32□□□□□ -0.12
HIF3A-202ENST00000244303 DDI1Q8WTU0 396 aa14.32□□□□□ -0.12
HIF3A-202ENST00000244303 TRIB3Q96RU7 358 aa14.32□□□□□ -0.12
HIF3A-202ENST00000244303 HOPXQ9BPY8 73 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms