RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 BEND4Q6ZU67 534 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 ERGIC2Q96RQ1 377 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 ETNK2Q9NVF9 386 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 ZNF490Q9ULM2 529 aaPredicted RBP13.18□□□□□ -0.3
NEK9-201ENST00000238616 PRR36Q9H6K5 1346 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 ENPP3O14638 875 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 CDH3P22223 829 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 CLCN7P51798 805 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 TNK2Q07912 1038 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 ZCCHC12Q6PEW1 402 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 C17orf64Q86WR6 236 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 OR52J3Q8NH60 311 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 OVCA2Q8WZ82 227 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 ZNF285Q96NJ3 590 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 ATG13O75143 517 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 MSX2P35548 267 aaPredicted RBP13.18□□□□□ -0.3
NEK9-201ENST00000238616 RPL21P46778 160 aaKnown RBP13.18□□□□□ -0.3
NEK9-201ENST00000238616 ITPK1Q13572 414 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 SLC15A2Q16348 729 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 RGS21Q2M5E4 152 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 CERCAMQ5T4B2 595 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 ACTRT1Q8TDG2 376 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 XAGE5Q8WWM1 108 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 EXOSC8Q96B26 276 aaKnown RBP13.18□□□□□ -0.3
NEK9-201ENST00000238616 ZHX1-C8orf76Q96EF9 292 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 C8orf48Q96LL4 319 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 SEMA6BQ9H3T3 888 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 PRDM8Q9NQV8 689 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 NRCAMQ92823 1304 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 INO80Q9ULG1 1556 aaPredicted RBP13.18□□□□□ -0.3
NEK9-201ENST00000238616 GSC2O15499 205 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 AP2A2O94973 939 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 TFEBP19484 476 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 RPL14P50914 215 aaKnown RBP13.18□□□□□ -0.3
NEK9-201ENST00000238616 HSPB3Q12988 150 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 SPIN3Q5JUX0 258 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 UNC5AQ6ZN44 842 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 HID1Q8IV36 788 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 TMEM86AQ8N2M4 240 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 ADGRE2Q9UHX3 823 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 MIA3Q5JRA6 1907 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 ZSCAN5DPP0CG00 497 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 HNRNPLP14866 589 aaKnown RBP eCLIP13.18□□□□□ -0.33e-6■■□□□ 11.6
NEK9-201ENST00000238616 MTHFRP42898 656 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 CTBP1Q13363 440 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 NAE1Q13564 534 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 OTOL1A6NHN0 477 aaPredicted RBP13.18□□□□□ -0.3
NEK9-201ENST00000238616 CLDN4O14493 209 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 CYP17A1P05093 508 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 ALOX5P09917 674 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 GNSP15586 552 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 ZNF16P17020 682 aaPredicted RBP13.18□□□□□ -0.3
NEK9-201ENST00000238616 TSPAN5P62079 268 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 LARS2Q15031 903 aaKnown RBP13.18□□□□□ -0.3
NEK9-201ENST00000238616 SNAPC1Q16533 368 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 ABCA11PQ4W5N1 156 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 ZDHHC20Q5W0Z9 365 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 KYAT3Q6YP21 454 aaKnown RBP13.18□□□□□ -0.3
NEK9-201ENST00000238616 SSX6Q7RTT6 188 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 PTGR2Q8N8N7 351 aaPredicted RBP13.18□□□□□ -0.3
NEK9-201ENST00000238616 OR2L8Q8NGY9 312 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 ARMC5Q96C12 935 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 RBM18Q96H35 190 aaKnown RBP13.18□□□□□ -0.3
NEK9-201ENST00000238616 SLC28A3Q9HAS3 691 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 BRF2Q9HAW0 419 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 RTTNQ86VV8 2226 aa13.18□□□□□ -0.3
NEK9-201ENST00000238616 OR1I1O60431 355 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 DNASE1L3Q13609 305 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 MSANTD2Q6P1R3 559 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 HDAC10Q969S8 669 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 KIAA0100Q14667 2235 aaKnown RBP13.17□□□□□ -0.3
NEK9-201ENST00000238616 RPL22P35268 128 aaKnown RBP13.17□□□□□ -0.3
NEK9-201ENST00000238616 BEND5Q7L4P6 421 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 TMC8Q8IU68 726 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 C7orf61Q8IZ16 206 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 DNAJA4Q8WW22 397 aaPredicted RBP13.17□□□□□ -0.3
NEK9-201ENST00000238616 BSNDQ8WZ55 320 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 ZNF226Q9NYT6 803 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 A0A087WXM4 84 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 METTL18O95568 372 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 SMIM10L2AP0DMW4 78 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 SMIM10L2BP0DMW5 78 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 PGAM2P15259 253 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 CD52P31358 61 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 ELOAQ14241 798 aaKnown RBP13.17□□□□□ -0.3
NEK9-201ENST00000238616 NDUFA9Q16795 377 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 HKDC1Q2TB90 917 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 CPTPQ5TA50 214 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 GLUD1P00367 558 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 LPOP22079 712 aaPredicted RBP13.17□□□□□ -0.3
NEK9-201ENST00000238616 NAGLUP54802 743 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 KIAA0319LQ8IZA0 1049 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 ADAMTS15Q8TE58 950 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 GPN1Q9HCN4 374 aaPredicted RBP13.17□□□□□ -0.3
NEK9-201ENST00000238616 PRDM15P57071 1507 aaPredicted RBP13.17□□□□□ -0.3
NEK9-201ENST00000238616 LRRC72A6NJI9 287 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 GOT1P17174 413 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 BROXQ5VW32 411 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 GPR107Q5VW38 600 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 PPP2R2DQ66LE6 453 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms