RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 TMEM164Q5U3C3 297 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 RNF43Q68DV7 783 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 DNAAF5Q86Y56 855 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 DNAJC28Q9NX36 388 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 SPATA31A3Q5VYP0 1347 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 OR10H3O60404 316 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 RPL21P46778 160 aaKnown RBP11.08□□□□□ -0.64
MSH6-201ENST00000234420 C16orf86Q6ZW13 317 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 DNAJB7Q7Z6W7 309 aaPredicted RBP11.08□□□□□ -0.64
MSH6-201ENST00000234420 COMTD1Q86VU5 262 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 NLGN4XQ8N0W4 816 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 FBXO22Q8NEZ5 403 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 CD300LFQ8TDQ1 290 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 TATDN2Q93075 761 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 PREBQ9HCU5 417 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 PHF24Q9UPV7 400 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 MAGEB3O15480 346 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 ADH1CP00326 375 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 CD2P06729 351 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 JMJD7P0C870 316 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 RPS12P25398 132 aaKnown RBP11.08□□□□□ -0.64
MSH6-201ENST00000234420 IL12BP29460 328 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 FAM187BQ17R55 369 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 TBRG1Q3YBR2 411 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 C3orf67Q6ZVT6 689 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 STOML3Q8TAV4 291 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 KAT5Q92993 513 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 NSMCE3Q96MG7 304 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 ZNF471Q9BX82 626 aaPredicted RBP11.08□□□□□ -0.64
MSH6-201ENST00000234420 OSGEPQ9NPF4 335 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 WDR27A2RRH5 827 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 PGRP06401 933 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 SNRPB2P08579 225 aaKnown RBP11.08□□□□□ -0.64
MSH6-201ENST00000234420 NR2F1P10589 423 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 HPCAL1P37235 193 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 ILF3Q12906 894 aaKnown RBP eCLIP11.08□□□□□ -0.641e-6■■■□□ 16.2
MSH6-201ENST00000234420 AMIGO1Q86WK6 493 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 CFAP206Q8IYR0 622 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 SLAIN1Q8ND83 568 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 BRSK1Q8TDC3 778 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 ARL15Q9NXU5 204 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 TBX20Q9UMR3 447 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 ADH1AP07327 375 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 NT5EP21589 574 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 BUD31P41223 144 aaPredicted RBP11.08□□□□□ -0.64
MSH6-201ENST00000234420 ARMC12Q5T9G4 340 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 MLIPQ5VWP3 458 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 PHYKPLQ8IUZ5 450 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 PIK3R3Q92569 461 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 KCNIP3Q9Y2W7 256 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 FADS3Q9Y5Q0 445 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 CCDC163A0A0D9SF12 145 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 PPEF2O14830 753 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 PER2O15055 1255 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 PIRTP0C851 137 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 SRCP12931 536 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 ZNF3P17036 446 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 TKTP29401 623 aaKnown RBP11.07□□□□□ -0.64
MSH6-201ENST00000234420 PRKG2Q13237 762 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 ZBTB6Q15916 424 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 HECTD3Q5T447 861 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 CHST4Q8NCG5 386 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 FAM151AQ8WW52 585 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 REPS1Q96D71 796 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 ELAC1Q9H777 363 aaKnown RBP11.07□□□□□ -0.64
MSH6-201ENST00000234420 ARHGAP31Q2M1Z3 1444 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 SLC33A1O00400 549 aaPredicted RBP11.07□□□□□ -0.64
MSH6-201ENST00000234420 TRIM38O00635 465 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 SPARCP09486 303 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 PRLRP16471 622 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 ASMTP46597 345 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 FBXO33Q7Z6M2 555 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 ALYREFQ86V81 257 aaKnown RBP11.07□□□□□ -0.64
MSH6-201ENST00000234420 GALNT12Q8IXK2 581 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 FAM98AQ8NCA5 519 aaKnown RBP11.07□□□□□ -0.64
MSH6-201ENST00000234420 CPT1CQ8TCG5 803 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 DNAJA4Q8WW22 397 aaPredicted RBP11.07□□□□□ -0.64
MSH6-201ENST00000234420 CIB1Q99828 191 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 CCNB1IP1Q9NPC3 277 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 GNEQ9Y223 722 aaKnown RBP11.07□□□□□ -0.64
MSH6-201ENST00000234420 RNF17Q9BXT8 1623 aaKnown RBP11.07□□□□□ -0.64
MSH6-201ENST00000234420 FBXO21O94952 628 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 SGPL1O95470 568 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 VNN2O95498 520 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 PTPN6P29350 595 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 DNASE1L1P49184 302 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 SP140Q13342 867 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 GRTP1Q5TC63 336 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 GDF6Q6KF10 455 aaPredicted RBP11.07□□□□□ -0.64
MSH6-201ENST00000234420 GPR65Q8IYL9 337 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 JPH3Q8WXH2 748 aaPredicted RBP11.07□□□□□ -0.64
MSH6-201ENST00000234420 SGCDQ92629 289 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 VAT1Q99536 393 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 DPYSL5Q9BPU6 564 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 SLC27A6Q9Y2P4 619 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 HES2Q9Y543 173 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 E9PAM4 449 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 AKAP8O43823 692 aaKnown RBP11.07□□□□□ -0.64
MSH6-201ENST00000234420 ECHS1P30084 290 aa11.07□□□□□ -0.64
MSH6-201ENST00000234420 CD52P31358 61 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms