RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 DEF8Q6ZN54 512 aa18.39■□□□□ 0.53
CLIP2-201ENST00000223398 OR52L1Q8NGH7 329 aa18.39■□□□□ 0.53
CLIP2-201ENST00000223398 ZCCHC10Q8TBK6 192 aa18.39■□□□□ 0.53
CLIP2-201ENST00000223398 SLC17A7Q9P2U7 560 aa18.39■□□□□ 0.53
CLIP2-201ENST00000223398 MTF2Q9Y483 593 aaPredicted RBP18.39■□□□□ 0.53
CLIP2-201ENST00000223398 COX4I1P13073 169 aa18.39■□□□□ 0.53
CLIP2-201ENST00000223398 GABRB2P47870 512 aa18.39■□□□□ 0.53
CLIP2-201ENST00000223398 FSTL1Q12841 308 aa18.39■□□□□ 0.53
CLIP2-201ENST00000223398 NEDD8Q15843 81 aa18.39■□□□□ 0.53
CLIP2-201ENST00000223398 SPDYCQ5MJ68 293 aa18.39■□□□□ 0.53
CLIP2-201ENST00000223398 NXNL1Q96CM4 212 aa18.39■□□□□ 0.53
CLIP2-201ENST00000223398 TEKT5Q96M29 485 aa18.39■□□□□ 0.53
CLIP2-201ENST00000223398 PRRG4Q9BZD6 226 aa18.39■□□□□ 0.53
CLIP2-201ENST00000223398 LRRC4CQ9HCJ2 640 aa18.39■□□□□ 0.53
CLIP2-201ENST00000223398 RECQL5O94762 991 aaPredicted RBP18.39■□□□□ 0.53
CLIP2-201ENST00000223398 MAPK10P53779 464 aa18.39■□□□□ 0.53
CLIP2-201ENST00000223398 AP1S1P61966 158 aa18.39■□□□□ 0.53
CLIP2-201ENST00000223398 ZNF792Q3KQV3 632 aa18.39■□□□□ 0.53
CLIP2-201ENST00000223398 NEK10Q6ZWH5 1172 aa18.39■□□□□ 0.53
CLIP2-201ENST00000223398 FUBP3Q96I24 572 aaKnown RBP eCLIP18.39■□□□□ 0.53
CLIP2-201ENST00000223398 REXO5Q96IC2 774 aaKnown RBP18.39■□□□□ 0.53
CLIP2-201ENST00000223398 MAPRE3Q9UPY8 281 aa18.39■□□□□ 0.53
CLIP2-201ENST00000223398 TTC24A2A3L6 582 aaPredicted RBP18.38■□□□□ 0.53
CLIP2-201ENST00000223398 HDAC3O15379 428 aa18.38■□□□□ 0.53
CLIP2-201ENST00000223398 GOT2P00505 430 aaKnown RBP18.38■□□□□ 0.53
CLIP2-201ENST00000223398 CCNYL3P0C7X3 344 aa18.38■□□□□ 0.53
CLIP2-201ENST00000223398 NDST2P52849 883 aa18.38■□□□□ 0.53
CLIP2-201ENST00000223398 NRF1Q16656 503 aa18.38■□□□□ 0.53
CLIP2-201ENST00000223398 GRASPQ7Z6J2 395 aaPredicted RBP18.38■□□□□ 0.53
CLIP2-201ENST00000223398 CUZD1Q86UP6 607 aa18.38■□□□□ 0.53
CLIP2-201ENST00000223398 MMAAQ8IVH4 418 aaKnown RBP18.38■□□□□ 0.53
CLIP2-201ENST00000223398 FNIP1Q8TF40 1166 aa18.38■□□□□ 0.53
CLIP2-201ENST00000223398 TRMT61BQ9BVS5 477 aaKnown RBP18.38■□□□□ 0.53
CLIP2-201ENST00000223398 Q9Y3F1 56 aa18.38■□□□□ 0.53
CLIP2-201ENST00000223398 AP2A1O95782 977 aa18.38■□□□□ 0.53
CLIP2-201ENST00000223398 AKT2P31751 481 aa18.38■□□□□ 0.53
CLIP2-201ENST00000223398 SLC11A1P49279 550 aa18.38■□□□□ 0.53
CLIP2-201ENST00000223398 LBX1P52954 281 aa18.38■□□□□ 0.53
CLIP2-201ENST00000223398 ARMCX6Q7L4S7 300 aa18.38■□□□□ 0.53
CLIP2-201ENST00000223398 TLR9Q9NR96 1032 aa18.38■□□□□ 0.53
CLIP2-201ENST00000223398 PAPOLBQ9NRJ5 636 aaKnown RBP18.38■□□□□ 0.53
CLIP2-201ENST00000223398 TIMM22Q9Y584 194 aa18.38■□□□□ 0.53
CLIP2-201ENST00000223398 PPM1JQ5JR12 505 aa18.38■□□□□ 0.53
CLIP2-201ENST00000223398 CEP78Q5JTW2 689 aa18.38■□□□□ 0.53
CLIP2-201ENST00000223398 SNX30Q5VWJ9 437 aa18.38■□□□□ 0.53
CLIP2-201ENST00000223398 EIF3MQ7L2H7 374 aaKnown RBP18.38■□□□□ 0.53
CLIP2-201ENST00000223398 OR8H2Q8N162 312 aa18.38■□□□□ 0.53
CLIP2-201ENST00000223398 PNPT1Q8TCS8 783 aaKnown RBP18.38■□□□□ 0.53
CLIP2-201ENST00000223398 METTL21AQ8WXB1 218 aa18.38■□□□□ 0.53
CLIP2-201ENST00000223398 SPATA5L1Q9BVQ7 753 aa18.38■□□□□ 0.53
CLIP2-201ENST00000223398 ZNF536O15090 1300 aa18.38■□□□□ 0.53
CLIP2-201ENST00000223398 HCRTO43612 131 aa18.38■□□□□ 0.53
CLIP2-201ENST00000223398 TALDO1P37837 337 aa18.38■□□□□ 0.53
CLIP2-201ENST00000223398 RPIAP49247 311 aa18.38■□□□□ 0.53
CLIP2-201ENST00000223398 KPNB1Q14974 876 aaKnown RBP18.38■□□□□ 0.53
CLIP2-201ENST00000223398 LSM12Q3MHD2 195 aaKnown RBP18.38■□□□□ 0.53
CLIP2-201ENST00000223398 ESRP1Q6NXG1 681 aaKnown RBP18.38■□□□□ 0.53
CLIP2-201ENST00000223398 CCDC103Q8IW40 242 aa18.38■□□□□ 0.53
CLIP2-201ENST00000223398 ZNF563Q8TA94 476 aa18.38■□□□□ 0.53
CLIP2-201ENST00000223398 ZNF516Q92618 1163 aa18.38■□□□□ 0.53
CLIP2-201ENST00000223398 GRIN2DO15399 1336 aa18.38■□□□□ 0.53
CLIP2-201ENST00000223398 A0A1W2PQ67 120 aa18.37■□□□□ 0.53
CLIP2-201ENST00000223398 TCEA1P23193 301 aaKnown RBP18.37■□□□□ 0.53
CLIP2-201ENST00000223398 SERPINB1P30740 379 aa18.37■□□□□ 0.53
CLIP2-201ENST00000223398 HSPA7P48741 367 aa18.37■□□□□ 0.53
CLIP2-201ENST00000223398 JAM2P57087 298 aa18.37■□□□□ 0.53
CLIP2-201ENST00000223398 PSME3P61289 254 aa18.37■□□□□ 0.53
CLIP2-201ENST00000223398 DAW1Q8N136 415 aa18.37■□□□□ 0.53
CLIP2-201ENST00000223398 MAGEE2Q8TD90 523 aaPredicted RBP18.37■□□□□ 0.53
CLIP2-201ENST00000223398 RAD51AP1Q96B01 352 aa18.37■□□□□ 0.53
CLIP2-201ENST00000223398 S100A13Q99584 98 aa18.37■□□□□ 0.53
CLIP2-201ENST00000223398 ENOPH1Q9UHY7 261 aa18.37■□□□□ 0.53
CLIP2-201ENST00000223398 TRAF6Q9Y4K3 522 aa18.37■□□□□ 0.53
CLIP2-201ENST00000223398 TFPIP10646 304 aa18.37■□□□□ 0.53
CLIP2-201ENST00000223398 NMBRP28336 390 aa18.37■□□□□ 0.53
CLIP2-201ENST00000223398 IL10RBQ08334 325 aa18.37■□□□□ 0.53
CLIP2-201ENST00000223398 INAQ16352 499 aa18.37■□□□□ 0.53
CLIP2-201ENST00000223398 OFCC1Q8IZS5 231 aa18.37■□□□□ 0.53
CLIP2-201ENST00000223398 RDH11Q8TC12 318 aa18.37■□□□□ 0.53
CLIP2-201ENST00000223398 OR2AG1Q9H205 316 aa18.37■□□□□ 0.53
CLIP2-201ENST00000223398 SLIT2O94813 1529 aa18.37■□□□□ 0.53
CLIP2-201ENST00000223398 TRBC1P01850 177 aa18.37■□□□□ 0.53
CLIP2-201ENST00000223398 TSPAN19P0C672 248 aa18.37■□□□□ 0.53
CLIP2-201ENST00000223398 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.37■□□□□ 0.53
CLIP2-201ENST00000223398 TSNQ15631 228 aaKnown RBP18.37■□□□□ 0.53
CLIP2-201ENST00000223398 TIGD2Q4W5G0 525 aa18.37■□□□□ 0.53
CLIP2-201ENST00000223398 ARSIQ5FYB1 569 aa18.37■□□□□ 0.53
CLIP2-201ENST00000223398 ADHFE1Q8IWW8 467 aa18.37■□□□□ 0.53
CLIP2-201ENST00000223398 SUSD3Q96L08 255 aa18.37■□□□□ 0.53
CLIP2-201ENST00000223398 SMG9Q9H0W8 520 aaKnown RBP18.37■□□□□ 0.53
CLIP2-201ENST00000223398 SLCO1B3Q9NPD5 702 aa18.37■□□□□ 0.53
CLIP2-201ENST00000223398 ERN1O75460 977 aaKnown RBP18.37■□□□□ 0.53
CLIP2-201ENST00000223398 FGF18O76093 207 aa18.37■□□□□ 0.53
CLIP2-201ENST00000223398 SNAI1O95863 264 aaPredicted RBP18.37■□□□□ 0.53
CLIP2-201ENST00000223398 CHRNB2P17787 502 aa18.37■□□□□ 0.53
CLIP2-201ENST00000223398 TPSB2P20231 275 aa18.37■□□□□ 0.53
CLIP2-201ENST00000223398 TPSAB1Q15661 275 aa18.37■□□□□ 0.53
CLIP2-201ENST00000223398 ZIK1Q3SY52 487 aaPredicted RBP18.37■□□□□ 0.53
CLIP2-201ENST00000223398 ARHGAP39Q9C0H5 1083 aa18.37■□□□□ 0.53
CLIP2-201ENST00000223398 LMAN2LQ9H0V9 348 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms