RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 TMEM233B4DJY2 109 aa29.55■■■□□ 2.32
PABPN1-201ENST00000216727 CTPS1P17812 591 aa29.55■■■□□ 2.32
PABPN1-201ENST00000216727 PITRM1Q5JRX3 1037 aa29.55■■■□□ 2.32
PABPN1-201ENST00000216727 SCUBE1Q8IWY4 988 aa29.55■■■□□ 2.32
PABPN1-201ENST00000216727 STK40Q8N2I9 435 aa29.55■■■□□ 2.32
PABPN1-201ENST00000216727 NKAPQ8N5F7 415 aaKnown RBP29.55■■■□□ 2.32
PABPN1-201ENST00000216727 STAG3L4Q8TBR4 150 aa29.55■■■□□ 2.32
PABPN1-201ENST00000216727 TCEAL4Q96EI5 215 aa29.55■■■□□ 2.32
PABPN1-201ENST00000216727 MOSPD3O75425 235 aa29.55■■■□□ 2.32
PABPN1-201ENST00000216727 VPS26AO75436 327 aa29.55■■■□□ 2.32
PABPN1-201ENST00000216727 ALPIP09923 528 aa29.55■■■□□ 2.32
PABPN1-201ENST00000216727 MTHFD2P13995 350 aa29.55■■■□□ 2.32
PABPN1-201ENST00000216727 OR2AP1Q8NGE2 309 aa29.55■■■□□ 2.32
PABPN1-201ENST00000216727 PPP1R36Q96LQ0 422 aa29.55■■■□□ 2.32
PABPN1-201ENST00000216727 GPR21Q99679 349 aa29.55■■■□□ 2.32
PABPN1-201ENST00000216727 HS3ST2Q9Y278 367 aa29.55■■■□□ 2.32
PABPN1-201ENST00000216727 SLC4A7Q9Y6M7 1214 aa29.55■■■□□ 2.32
PABPN1-201ENST00000216727 SEC23IPQ9Y6Y8 1000 aaKnown RBP29.55■■■□□ 2.32
PABPN1-201ENST00000216727 KERAO60938 352 aa29.54■■■□□ 2.32
PABPN1-201ENST00000216727 COX4I1P13073 169 aa29.54■■■□□ 2.32
PABPN1-201ENST00000216727 UBE3AQ05086 875 aa29.54■■■□□ 2.32
PABPN1-201ENST00000216727 UNC50Q53HI1 259 aa29.54■■■□□ 2.32
PABPN1-201ENST00000216727 DGKKQ5KSL6 1271 aa29.54■■■□□ 2.32
PABPN1-201ENST00000216727 CTSL3PQ5NE16 218 aa29.54■■■□□ 2.32
PABPN1-201ENST00000216727 WLSQ5T9L3 541 aa29.54■■■□□ 2.32
PABPN1-201ENST00000216727 CERS6Q6ZMG9 384 aa29.54■■■□□ 2.32
PABPN1-201ENST00000216727 UBE2Q1Q7Z7E8 422 aa29.54■■■□□ 2.32
PABPN1-201ENST00000216727 KCNJ9Q92806 393 aa29.54■■■□□ 2.32
PABPN1-201ENST00000216727 ISG20Q96AZ6 181 aaKnown RBP29.54■■■□□ 2.32
PABPN1-201ENST00000216727 FAM136AQ96C01 138 aa29.54■■■□□ 2.32
PABPN1-201ENST00000216727 ASB2Q96Q27 587 aa29.54■■■□□ 2.32
PABPN1-201ENST00000216727 SLC30A1Q9Y6M5 507 aa29.54■■■□□ 2.32
PABPN1-201ENST00000216727 A0A0U1RQS6 177 aa29.54■■■□□ 2.32
PABPN1-201ENST00000216727 CCDC189A1A4V9 331 aa29.54■■■□□ 2.32
PABPN1-201ENST00000216727 SDHDO14521 159 aa29.54■■■□□ 2.32
PABPN1-201ENST00000216727 OR1I1O60431 355 aa29.54■■■□□ 2.32
PABPN1-201ENST00000216727 RFPL2O75678 378 aa29.54■■■□□ 2.32
PABPN1-201ENST00000216727 ESR1P03372 595 aa29.54■■■□□ 2.32
PABPN1-201ENST00000216727 HLA-FP30511 346 aa29.54■■■□□ 2.32
PABPN1-201ENST00000216727 HOXA9P31269 272 aa29.54■■■□□ 2.32
PABPN1-201ENST00000216727 PPARGP37231 505 aaPredicted RBP29.54■■■□□ 2.32
PABPN1-201ENST00000216727 E2F5Q15329 346 aa29.54■■■□□ 2.32
PABPN1-201ENST00000216727 TEAD2Q15562 447 aa29.54■■■□□ 2.32
PABPN1-201ENST00000216727 ARHGAP15Q53QZ3 475 aa29.54■■■□□ 2.32
PABPN1-201ENST00000216727 ULK2Q8IYT8 1036 aa29.54■■■□□ 2.32
PABPN1-201ENST00000216727 HERVK_113Q902F9 699 aa29.54■■■□□ 2.32
PABPN1-201ENST00000216727 THTPAQ9BU02 230 aa29.54■■■□□ 2.32
PABPN1-201ENST00000216727 DCLRE1BQ9H816 532 aa29.54■■■□□ 2.32
PABPN1-201ENST00000216727 ZFYVE1Q9HBF4 777 aa29.54■■■□□ 2.32
PABPN1-201ENST00000216727 RWDD3Q9Y3V2 267 aa29.54■■■□□ 2.32
PABPN1-201ENST00000216727 DOCK6Q96HP0 2047 aa29.53■■■□□ 2.32
PABPN1-201ENST00000216727 LAMA2P24043 3122 aaKnown RBP29.53■■■□□ 2.32
PABPN1-201ENST00000216727 SUPT7LO94864 414 aa29.53■■■□□ 2.32
PABPN1-201ENST00000216727 SRCP12931 536 aa29.53■■■□□ 2.32
PABPN1-201ENST00000216727 RAB44Q7Z6P3 723 aaPredicted RBP29.53■■■□□ 2.32
PABPN1-201ENST00000216727 PTGR2Q8N8N7 351 aaPredicted RBP29.53■■■□□ 2.32
PABPN1-201ENST00000216727 CFAP61Q8NHU2 1237 aa29.53■■■□□ 2.32
PABPN1-201ENST00000216727 TBRG4Q969Z0 631 aaKnown RBP eCLIP29.53■■■□□ 2.32
PABPN1-201ENST00000216727 FAM161BQ96MY7 647 aa29.53■■■□□ 2.32
PABPN1-201ENST00000216727 MEAF6Q9HAF1 191 aa29.53■■■□□ 2.32
PABPN1-201ENST00000216727 EBF2Q9HAK2 575 aa29.53■■■□□ 2.32
PABPN1-201ENST00000216727 NOP53Q9NZM5 478 aaKnown RBP29.53■■■□□ 2.32
PABPN1-201ENST00000216727 MEI4A8MW99 385 aa29.52■■■□□ 2.32
PABPN1-201ENST00000216727 CSPG5O95196 566 aa29.52■■■□□ 2.32
PABPN1-201ENST00000216727 EZRP15311 586 aaKnown RBP29.52■■■□□ 2.32
PABPN1-201ENST00000216727 SERPINA4P29622 427 aa29.52■■■□□ 2.32
PABPN1-201ENST00000216727 KPNB1Q14974 876 aaKnown RBP29.52■■■□□ 2.32
PABPN1-201ENST00000216727 LEMD2Q8NC56 503 aa29.52■■■□□ 2.32
PABPN1-201ENST00000216727 CEP70Q8NHQ1 597 aa29.52■■■□□ 2.32
PABPN1-201ENST00000216727 RIN3Q8TB24 985 aa29.52■■■□□ 2.32
PABPN1-201ENST00000216727 LENG8Q96PV6 779 aaPredicted RBP29.52■■■□□ 2.32
PABPN1-201ENST00000216727 P2RY12Q9H244 342 aa29.52■■■□□ 2.32
PABPN1-201ENST00000216727 TNKS2Q9H2K2 1166 aa29.52■■■□□ 2.32
PABPN1-201ENST00000216727 TDP1Q9NUW8 608 aa29.52■■■□□ 2.32
PABPN1-201ENST00000216727 NKX1-2Q9UD57 310 aaPredicted RBP29.52■■■□□ 2.32
PABPN1-201ENST00000216727 FNDC3AQ9Y2H6 1198 aaKnown RBP29.52■■■□□ 2.32
PABPN1-201ENST00000216727 RHOP08100 348 aa29.52■■■□□ 2.32
PABPN1-201ENST00000216727 THRAP10827 490 aa29.52■■■□□ 2.32
PABPN1-201ENST00000216727 PIK3R1P27986 724 aa29.52■■■□□ 2.32
PABPN1-201ENST00000216727 SNRPD1P62314 119 aaKnown RBP29.52■■■□□ 2.32
PABPN1-201ENST00000216727 SLC25A3Q00325 362 aa29.52■■■□□ 2.32
PABPN1-201ENST00000216727 CDKN3Q16667 212 aa29.52■■■□□ 2.32
PABPN1-201ENST00000216727 KHDC1Q4VXA5 237 aaKnown RBP29.52■■■□□ 2.32
PABPN1-201ENST00000216727 SWT1Q5T5J6 900 aaKnown RBP29.52■■■□□ 2.32
PABPN1-201ENST00000216727 RPS27LQ71UM5 84 aaKnown RBP29.52■■■□□ 2.32
PABPN1-201ENST00000216727 TAS2R42Q7RTR8 314 aa29.52■■■□□ 2.32
PABPN1-201ENST00000216727 NET1Q7Z628 596 aaPredicted RBP29.52■■■□□ 2.32
PABPN1-201ENST00000216727 GRIN3AQ8TCU5 1115 aa29.52■■■□□ 2.32
PABPN1-201ENST00000216727 ACTRT2Q8TDY3 377 aa29.52■■■□□ 2.32
PABPN1-201ENST00000216727 WDR60Q8WVS4 1066 aa29.52■■■□□ 2.32
PABPN1-201ENST00000216727 RTKNQ9BST9 563 aa29.52■■■□□ 2.32
PABPN1-201ENST00000216727 TNFRSF12AQ9NP84 129 aa29.52■■■□□ 2.32
PABPN1-201ENST00000216727 TRMT6Q9UJA5 497 aaKnown RBP29.52■■■□□ 2.32
PABPN1-201ENST00000216727 LOC100653049A0A140TA62 436 aa29.51■■■□□ 2.31
PABPN1-201ENST00000216727 CAPN8A6NHC0 703 aa29.51■■■□□ 2.31
PABPN1-201ENST00000216727 UBXN8O00124 270 aa29.51■■■□□ 2.31
PABPN1-201ENST00000216727 UBFD1O14562 309 aaKnown RBP29.51■■■□□ 2.31
PABPN1-201ENST00000216727 KRT34O76011 436 aa29.51■■■□□ 2.31
PABPN1-201ENST00000216727 GKP32189 559 aa29.51■■■□□ 2.31
PABPN1-201ENST00000216727 INHBCP55103 352 aa29.51■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms