RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 ST8SIA6P61647 398 aa19.6■□□□□ 0.73
TNFRSF1A-201ENST00000162749 TIAL1Q01085 375 aaKnown RBP eCLIP19.6■□□□□ 0.731e-9■■■□□ 18.6
TNFRSF1A-201ENST00000162749 EIF4HQ15056 248 aaKnown RBP19.6■□□□□ 0.73
TNFRSF1A-201ENST00000162749 LRRC73Q5JTD7 316 aa19.6■□□□□ 0.73
TNFRSF1A-201ENST00000162749 LRRC66Q68CR7 880 aa19.6■□□□□ 0.73
TNFRSF1A-201ENST00000162749 ZCCHC23Q6ZST2 131 aa19.6■□□□□ 0.73
TNFRSF1A-201ENST00000162749 PIM3Q86V86 326 aa19.6■□□□□ 0.73
TNFRSF1A-201ENST00000162749 C10orf107Q8IVU9 208 aa19.6■□□□□ 0.73
TNFRSF1A-201ENST00000162749 YAF2Q8IY57 180 aa19.6■□□□□ 0.73
TNFRSF1A-201ENST00000162749 TERB1Q8NA31 727 aa19.6■□□□□ 0.73
TNFRSF1A-201ENST00000162749 NXNL1Q96CM4 212 aa19.6■□□□□ 0.73
TNFRSF1A-201ENST00000162749 CHFRQ96EP1 664 aa19.6■□□□□ 0.73
TNFRSF1A-201ENST00000162749 RIPOR3Q96MK2 946 aa19.6■□□□□ 0.73
TNFRSF1A-201ENST00000162749 TSNARE1Q96NA8 513 aa19.6■□□□□ 0.73
TNFRSF1A-201ENST00000162749 CD248Q9HCU0 757 aa19.6■□□□□ 0.73
TNFRSF1A-201ENST00000162749 CPSF2Q9P2I0 782 aaKnown RBP19.6■□□□□ 0.73
TNFRSF1A-201ENST00000162749 RUVBL2Q9Y230 463 aaKnown RBP19.6■□□□□ 0.73
TNFRSF1A-201ENST00000162749 A0A1W2PQ67 120 aa19.6■□□□□ 0.73
TNFRSF1A-201ENST00000162749 UBA6A0AVT1 1052 aaPredicted RBP19.6■□□□□ 0.73
TNFRSF1A-201ENST00000162749 G3V2L1 256 aa19.6■□□□□ 0.73
TNFRSF1A-201ENST00000162749 WISP3O95389 354 aaPredicted RBP19.6■□□□□ 0.73
TNFRSF1A-201ENST00000162749 SBK3P0C264 359 aa19.6■□□□□ 0.73
TNFRSF1A-201ENST00000162749 FGF3P11487 239 aaPredicted RBP19.6■□□□□ 0.73
TNFRSF1A-201ENST00000162749 CPA3P15088 417 aa19.6■□□□□ 0.73
TNFRSF1A-201ENST00000162749 FDXRP22570 491 aa19.6■□□□□ 0.73
TNFRSF1A-201ENST00000162749 LHCGRP22888 699 aa19.6■□□□□ 0.73
TNFRSF1A-201ENST00000162749 OVGP1Q12889 678 aa19.6■□□□□ 0.73
TNFRSF1A-201ENST00000162749 SNCBQ16143 134 aa19.6■□□□□ 0.73
TNFRSF1A-201ENST00000162749 ATG16L1Q676U5 607 aa19.6■□□□□ 0.73
TNFRSF1A-201ENST00000162749 BRAT1Q6PJG6 821 aa19.6■□□□□ 0.73
TNFRSF1A-201ENST00000162749 FSTL5Q8N475 847 aaPredicted RBP19.6■□□□□ 0.73
TNFRSF1A-201ENST00000162749 UBXN10Q96LJ8 280 aa19.6■□□□□ 0.73
TNFRSF1A-201ENST00000162749 LRRC37BQ96QE4 947 aa19.6■□□□□ 0.73
TNFRSF1A-201ENST00000162749 RPP25Q9BUL9 199 aaKnown RBP19.6■□□□□ 0.73
TNFRSF1A-201ENST00000162749 MTCH2Q9Y6C9 303 aa19.6■□□□□ 0.73
TNFRSF1A-201ENST00000162749 LRRK1Q38SD2 2015 aa19.6■□□□□ 0.73
TNFRSF1A-201ENST00000162749 TRIOO75962 3097 aa19.59■□□□□ 0.73
TNFRSF1A-201ENST00000162749 NDUFS3O75489 264 aa19.59■□□□□ 0.73
TNFRSF1A-201ENST00000162749 PRAMEF1O95521 474 aa19.59■□□□□ 0.73
TNFRSF1A-201ENST00000162749 IL1BP01584 269 aa19.59■□□□□ 0.73
TNFRSF1A-201ENST00000162749 BPIP17213 487 aa19.59■□□□□ 0.73
TNFRSF1A-201ENST00000162749 SKIV2L2P42285 1042 aaKnown RBP19.59■□□□□ 0.73
TNFRSF1A-201ENST00000162749 MNAT1P51948 309 aa19.59■□□□□ 0.73
TNFRSF1A-201ENST00000162749 POLR2LP62875 67 aaKnown RBP19.59■□□□□ 0.73
TNFRSF1A-201ENST00000162749 CACNG1Q06432 222 aa19.59■□□□□ 0.73
TNFRSF1A-201ENST00000162749 ARSIQ5FYB1 569 aa19.59■□□□□ 0.73
TNFRSF1A-201ENST00000162749 FAM151BQ6UXP7 276 aa19.59■□□□□ 0.73
TNFRSF1A-201ENST00000162749 RFWD2Q8NHY2 731 aa19.59■□□□□ 0.73
TNFRSF1A-201ENST00000162749 MSLNLQ96KJ4 702 aa19.59■□□□□ 0.73
TNFRSF1A-201ENST00000162749 AARSD1Q9BTE6 412 aaKnown RBP19.59■□□□□ 0.73
TNFRSF1A-201ENST00000162749 UNKQ9C0B0 810 aaKnown RBP19.59■□□□□ 0.73
TNFRSF1A-201ENST00000162749 IL26Q9NPH9 171 aa19.59■□□□□ 0.73
TNFRSF1A-201ENST00000162749 IL36AQ9UHA7 158 aa19.59■□□□□ 0.73
TNFRSF1A-201ENST00000162749 NUMBLQ9Y6R0 609 aa19.59■□□□□ 0.73
TNFRSF1A-201ENST00000162749 SRP72O76094 671 aaKnown RBP19.59■□□□□ 0.73
TNFRSF1A-201ENST00000162749 KRT16P08779 473 aa19.59■□□□□ 0.73
TNFRSF1A-201ENST00000162749 CSHL1Q14406 222 aa19.59■□□□□ 0.73
TNFRSF1A-201ENST00000162749 SETDB1Q15047 1291 aa19.59■□□□□ 0.73
TNFRSF1A-201ENST00000162749 TSNAXIP1Q2TAA8 658 aa19.59■□□□□ 0.73
TNFRSF1A-201ENST00000162749 AARS2Q5JTZ9 985 aaKnown RBP19.59■□□□□ 0.73
TNFRSF1A-201ENST00000162749 ICE2Q659A1 982 aa19.59■□□□□ 0.73
TNFRSF1A-201ENST00000162749 LRRC8EQ6NSJ5 796 aa19.59■□□□□ 0.73
TNFRSF1A-201ENST00000162749 TMEM207Q6UWW9 146 aa19.59■□□□□ 0.73
TNFRSF1A-201ENST00000162749 HEXDCQ8WVB3 486 aa19.59■□□□□ 0.73
TNFRSF1A-201ENST00000162749 ANKRD49Q8WVL7 239 aa19.59■□□□□ 0.73
TNFRSF1A-201ENST00000162749 BIRC8Q96P09 236 aa19.59■□□□□ 0.73
TNFRSF1A-201ENST00000162749 C20orf27Q9GZN8 174 aa19.59■□□□□ 0.73
TNFRSF1A-201ENST00000162749 TTYH1Q9H313 450 aaPredicted RBP19.59■□□□□ 0.73
TNFRSF1A-201ENST00000162749 IGSF5Q9NSI5 407 aa19.59■□□□□ 0.73
TNFRSF1A-201ENST00000162749 VPS9D1Q9Y2B5 631 aa19.59■□□□□ 0.73
TNFRSF1A-201ENST00000162749 MED16Q9Y2X0 877 aa19.59■□□□□ 0.73
TNFRSF1A-201ENST00000162749 SLC30A1Q9Y6M5 507 aa19.59■□□□□ 0.73
TNFRSF1A-201ENST00000162749 OR1I1O60431 355 aa19.58■□□□□ 0.73
TNFRSF1A-201ENST00000162749 SNNO75324 88 aaPredicted RBP19.58■□□□□ 0.73
TNFRSF1A-201ENST00000162749 ATP6V1G2O95670 118 aa19.58■□□□□ 0.73
TNFRSF1A-201ENST00000162749 APOA4P06727 396 aa19.58■□□□□ 0.73
TNFRSF1A-201ENST00000162749 CHRM1P11229 460 aaPredicted RBP19.58■□□□□ 0.73
TNFRSF1A-201ENST00000162749 GDI1P31150 447 aa19.58■□□□□ 0.73
TNFRSF1A-201ENST00000162749 LRIG1Q96JA1 1093 aa19.58■□□□□ 0.73
TNFRSF1A-201ENST00000162749 XPR1Q9UBH6 696 aa19.58■□□□□ 0.73
TNFRSF1A-201ENST00000162749 B4GALT6Q9UBX8 382 aa19.58■□□□□ 0.73
TNFRSF1A-201ENST00000162749 TARM1B6A8C7 271 aa19.57■□□□□ 0.72
TNFRSF1A-201ENST00000162749 DCTN3O75935 186 aa19.57■□□□□ 0.72
TNFRSF1A-201ENST00000162749 CCDC166P0CW27 439 aa19.57■□□□□ 0.72
TNFRSF1A-201ENST00000162749 FMO4P31512 558 aa19.57■□□□□ 0.72
TNFRSF1A-201ENST00000162749 MTHFRP42898 656 aa19.57■□□□□ 0.72
TNFRSF1A-201ENST00000162749 SUOXP51687 545 aa19.57■□□□□ 0.72
TNFRSF1A-201ENST00000162749 OCRLQ01968 901 aa19.57■□□□□ 0.72
TNFRSF1A-201ENST00000162749 PTSQ03393 145 aa19.57■□□□□ 0.72
TNFRSF1A-201ENST00000162749 GRIN2CQ14957 1233 aa19.57■□□□□ 0.72
TNFRSF1A-201ENST00000162749 CCDC91Q7Z6B0 441 aa19.57■□□□□ 0.72
TNFRSF1A-201ENST00000162749 CBARPQ8N350 705 aaPredicted RBP19.57■□□□□ 0.72
TNFRSF1A-201ENST00000162749 KDM1BQ8NB78 822 aa19.57■□□□□ 0.72
TNFRSF1A-201ENST00000162749 C7orf26Q96N11 449 aa19.57■□□□□ 0.72
TNFRSF1A-201ENST00000162749 OSBPL1AQ9BXW6 950 aa19.57■□□□□ 0.72
TNFRSF1A-201ENST00000162749 ZNF395Q9H8N7 513 aaPredicted RBP19.57■□□□□ 0.72
TNFRSF1A-201ENST00000162749 APPL1Q9UKG1 709 aa19.57■□□□□ 0.72
TNFRSF1A-201ENST00000162749 TSPAN11A1L157 253 aa19.57■□□□□ 0.72
TNFRSF1A-201ENST00000162749 ARNTLO00327 626 aa19.57■□□□□ 0.72
TNFRSF1A-201ENST00000162749 PFDN6O15212 129 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms