RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 PYDC1Q8WXC3 89 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 BHMTQ93088 406 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 NSMCE3Q96MG7 304 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 ATOH8Q96SQ7 321 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 GPR21Q99679 349 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 BEGAINQ9BUH8 593 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 MID1IP1Q9NPA3 183 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 MRPL40Q9NQ50 206 aaKnown RBP8.23□□□□□ -1.09
VAMP3-201ENST00000054666 PPM1HQ9ULR3 514 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 TMCO1Q9UM00 188 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 ZNF711Q9Y462 761 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 PCDHB9Q9Y5E1 797 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 OAS3Q9Y6K5 1087 aaKnown RBP8.23□□□□□ -1.09
VAMP3-201ENST00000054666 GBF1Q92538 1859 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.22□□□□□ -1.09
VAMP3-201ENST00000054666 CCDC189A1A4V9 331 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 H3BMM5 538 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 H7C0S8 307 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 PSMD12O00232 456 aaPredicted RBP8.22□□□□□ -1.09
VAMP3-201ENST00000054666 BTN3A1O00481 513 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 AZIN1O14977 448 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 TEX28O15482 410 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 CFLARO15519 480 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 SNX2O60749 519 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 OLFM2O95897 454 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 ESR1P03372 595 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 TSPAN8P19075 237 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 CDH13P55290 713 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 TIAL1Q01085 375 aaKnown RBP eCLIP8.22□□□□□ -1.09
VAMP3-201ENST00000054666 CACNG1Q06432 222 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 KLC1Q07866 573 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 CCNIQ14094 377 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 FLOT2Q14254 428 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 KIF19Q2TAC6 998 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 ANKS6Q68DC2 871 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 TXNDC8Q6A555 127 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 PSAPL1Q6NUJ1 521 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 Q6ZNB5 142 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 GK5Q6ZS86 529 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 CHSY3Q70JA7 882 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 TAS2R42Q7RTR8 314 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 TMCO2Q7Z6W1 182 aaPredicted RBP8.22□□□□□ -1.09
VAMP3-201ENST00000054666 TMEM150AQ86TG1 271 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 METTL3Q86U44 580 aaKnown RBP8.22□□□□□ -1.09
VAMP3-201ENST00000054666 SPNS2Q8IVW8 549 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 KCNJ9Q92806 393 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 CYP2S1Q96SQ9 504 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 TM6SF2Q9BZW4 377 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 YY1AP1Q9H869 796 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 RC3H2Q9HBD1 1191 aaKnown RBP8.22□□□□□ -1.09
VAMP3-201ENST00000054666 BPIFA1Q9NP55 256 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 OBSL1O75147 1896 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 NPEPPSL1A6NEC2 478 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 CLASP2O75122 1294 aaKnown RBP8.22□□□□□ -1.09
VAMP3-201ENST00000054666 SORBS2O94875 1100 aaKnown RBP8.22□□□□□ -1.09
VAMP3-201ENST00000054666 SIX3O95343 332 aaPredicted RBP8.22□□□□□ -1.09
VAMP3-201ENST00000054666 CD160O95971 181 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 IGSF6O95976 241 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 CHRM3P20309 590 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 CD9P21926 228 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 EEF1DP29692 281 aaKnown RBP8.22□□□□□ -1.09
VAMP3-201ENST00000054666 PTGER3P43115 390 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 KCNC1P48547 511 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 ATP4BP51164 291 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 CLCN4P51793 760 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 IL2P60568 153 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 WDR5P61964 334 aaKnown RBP8.22□□□□□ -1.09
VAMP3-201ENST00000054666 MRPS35P82673 323 aaKnown RBP8.22□□□□□ -1.09
VAMP3-201ENST00000054666 CYP4F8P98187 520 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 BCL2L1Q07817 233 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 LCP2Q13094 533 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 PTK2BQ14289 1009 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 TSNQ15631 228 aaKnown RBP8.22□□□□□ -1.09
VAMP3-201ENST00000054666 ATXN7L2Q5T6C5 722 aaPredicted RBP8.22□□□□□ -1.09
VAMP3-201ENST00000054666 TXNDC11Q6PKC3 985 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 IZUMO2Q6UXV1 221 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 EFL1Q7Z2Z2 1120 aaKnown RBP8.22□□□□□ -1.09
VAMP3-201ENST00000054666 DDIASQ8IXT1 998 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 GPR65Q8IYL9 337 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 TTC30BQ8N4P2 665 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 EFCAB3Q8N7B9 438 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 SHKBP1Q8TBC3 707 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 SH3RF2Q8TEC5 729 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 TWIST2Q8WVJ9 160 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 ACDQ96AP0 544 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 LINGO1Q96FE5 620 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 SLC22A12Q96S37 553 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 CDRT15Q96T59 188 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 MYCBPQ99417 103 aaPredicted RBP8.22□□□□□ -1.09
VAMP3-201ENST00000054666 SLC25A23Q9BV35 468 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 IL21Q9HBE4 155 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 TNFRSF12AQ9NP84 129 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 UTP6Q9NYH9 597 aaKnown RBP8.22□□□□□ -1.09
VAMP3-201ENST00000054666 PCDHB1Q9Y5F3 818 aa8.22□□□□□ -1.09
VAMP3-201ENST00000054666 TRAV19A0A0A6YYK7 116 aa8.21□□□□□ -1.09
VAMP3-201ENST00000054666 STX16-NPEPL1H3BU86 382 aa8.21□□□□□ -1.09
VAMP3-201ENST00000054666 UBFD1O14562 309 aaKnown RBP8.21□□□□□ -1.09
VAMP3-201ENST00000054666 STX16O14662 325 aa8.21□□□□□ -1.09
VAMP3-201ENST00000054666 NIPSNAP2O75323 286 aa8.21□□□□□ -1.09
VAMP3-201ENST00000054666 ECI2O75521 394 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms