RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 ZNF567Q8N184 647 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 LPCAT1Q8NF37 534 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 OR2T34Q8NGX1 318 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 OR2T3Q8NH03 318 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 C2orf15Q8WU43 125 aaKnown RBP6.06□□□□□ -1.44
VPS13D-201ENST00000011700 PIGBQ92521 554 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 WNT8BQ93098 351 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 PNPLA2Q96AD5 504 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 ABHD16BQ9H3Z7 469 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 NEUROD4Q9HD90 331 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 TBCCD1Q9NVR7 557 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 SPIN1Q9Y657 262 aaPredicted RBP6.06□□□□□ -1.44
VPS13D-201ENST00000011700 TRAV19A0A0A6YYK7 116 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 CACNB4O00305 520 aaPredicted RBP6.06□□□□□ -1.44
VPS13D-201ENST00000011700 PLOD3O60568 738 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 TSC22D2O75157 780 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 PROCP04070 461 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 LPOP22079 712 aaPredicted RBP6.06□□□□□ -1.44
VPS13D-201ENST00000011700 AGTR1P30556 359 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 OR1G1P47890 313 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 FASTKD3Q14CZ7 662 aaKnown RBP6.06□□□□□ -1.44
VPS13D-201ENST00000011700 CBWD6Q4V339 395 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 FBXL19Q6PCT2 694 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 RINLQ6ZS11 566 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 HEATR4Q86WZ0 1026 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 GOLM1Q8NBJ4 401 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 SLC28A2O43868 658 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 GRIA3P42263 894 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 RORCP51449 518 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 TROAPQ12815 778 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 MPPE1Q53F39 396 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 OVOS1Q6IE37 1185 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 ARHGAP36Q6ZRI8 547 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 C11orf65Q8NCR3 313 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 DYNLL2Q96FJ2 89 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 AIF1LQ9BQI0 150 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 TMEM121Q9BTD3 319 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 ZCCHC17Q9NP64 241 aaKnown RBP6.06□□□□□ -1.44
VPS13D-201ENST00000011700 PTGFRNQ9P2B2 879 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 ZNF282Q9UDV7 671 aaPredicted RBP6.06□□□□□ -1.44
VPS13D-201ENST00000011700 KCNK1O00180 336 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 OR10H2O60403 315 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 NUDT14O95848 222 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 ZSCAN5DPP0CG00 497 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 ANXA3P12429 323 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 GJA1P17302 382 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 CD47Q08722 323 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 KCNN1Q92952 543 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 PANX1Q96RD7 426 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 SLC22A4Q9H015 551 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 TMEM45AQ9NWC5 275 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 SPG21Q9NZD8 308 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 POLR2AP24928 1970 aaKnown RBP6.06□□□□□ -1.44
VPS13D-201ENST00000011700 SLC33A1O00400 549 aaPredicted RBP6.06□□□□□ -1.44
VPS13D-201ENST00000011700 RFXANKO14593 260 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 TNFRSF10BO14763 440 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 AP5Z1O43299 807 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 PRKAB2O43741 272 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 ERCC1P07992 297 aaPredicted RBP6.06□□□□□ -1.44
VPS13D-201ENST00000011700 NR2F1P10589 423 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 ACSL1P33121 698 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 C2orf80Q0P641 193 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 LRIF1Q5T3J3 769 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 EEPD1Q7L9B9 569 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 FAM71AQ8IYT1 594 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 HDDC3Q8N4P3 179 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 WDSUB1Q8N9V3 476 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 SLC7A6OSQ96CW6 309 aaPredicted RBP6.06□□□□□ -1.44
VPS13D-201ENST00000011700 VMP1Q96GC9 406 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 ZNF208O43345 1280 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 SNX3O60493 162 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 ZNF432O94892 652 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 CYP3A4P08684 503 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 RPA3P35244 121 aaPredicted RBP6.06□□□□□ -1.44
VPS13D-201ENST00000011700 APLP1P51693 650 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 CARTPTQ16568 116 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 ALG10Q5BKT4 473 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 CES5AQ6NT32 575 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 TATDN1Q6P1N9 297 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 RAD9BQ6WBX8 426 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 RAB11FIP2Q7L804 512 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 GALNT7Q86SF2 657 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 TTC7BQ86TV6 843 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 TATDN2Q93075 761 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 NXNL1Q96CM4 212 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 CNDP2Q96KP4 475 aaKnown RBP6.06□□□□□ -1.44
VPS13D-201ENST00000011700 PNMA5Q96PV4 448 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 PCDHGA2Q9Y5H1 932 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 JCADQ9P266 1359 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 ANK1P16157 1881 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 RGPD5Q99666 1765 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 CA12O43570 354 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 GMFGO60234 142 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 RAB36O95755 333 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 PDYNP01213 254 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 HOXD8P13378 290 aaPredicted RBP6.06□□□□□ -1.44
VPS13D-201ENST00000011700 KIR3DL1P43629 444 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 NAGLUP54802 743 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 FKBP1BP68106 108 aa6.06□□□□□ -1.44
VPS13D-201ENST00000011700 TAF1CQ15572 869 aaPredicted RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms