RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Grk5Q8VEB1 590 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Olfr826Q8VFU6 313 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Olfr825Q8VFU7 320 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Lrrc4Q99PH1 652 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Efhc2Q9D485 750 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Fam83dQ9D7I8 585 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Prl8a6Q9DAY2 240 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Fam83hQ148V8 1209 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Bnc2Q8BMQ3 1127 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Vmn1r203Q8R273 311 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Gm8857L7N291 182 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Banf1O54962 89 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 LgmnO89017 435 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Ptpn1P35821 432 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Pdx1P52946 284 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Calm5Q6W3E0 140 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 AcppQ8CE08 381 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Q9D2Q3 444 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 4933436I01RikQ9D3T1 429 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Mss51Q9D5Z5 446 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Oser1Q9D722 291 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Iigp1Q9QZ85 413 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Gm15448F6PZL4 682 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Psmd3P14685 530 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Cbx2P30658 519 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Slc17a7Q3TXX4 560 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Pip5kl1Q6U7H8 395 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Gk5Q8BX05 534 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Wnt9aQ8R5M2 365 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Pcdhgb1Q91XX8 918 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Cyp2j9Q924D1 502 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 CabyrQ9D424 453 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Maged1Q9QYH6 775 aaKnown RBP11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 EvplQ9D952 2035 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 MlxO08609 298 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 KeraO35367 351 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 FshrP35378 692 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Tnfaip8l3Q3TBL6 204 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Gm5485A0A1D5RM98 91 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 A0A286YDU1 74 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Fam46dB1ATX6 390 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Prl2c2P04095 224 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Ythdf1P59326 559 aaKnown RBP11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Msx2Q03358 267 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Olfr325Q5NCD2 326 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Fbxo43Q8CDI2 640 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Mrpl45Q9D0Q7 306 aaKnown RBP11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Exoc2Q9D4H1 924 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Cyp2b23E9Q593 491 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Gm21319F6YNI8 144 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Gm3383J3QQ59 259 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Gm3239L7N2D9 227 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 FkbplO35450 347 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Npy5rO70342 466 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 CatP24270 527 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Ppp3cbP48453 525 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 CenplQ3U3S3 329 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Bhlhb9Q6PB60 539 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Mfsd14bQ8CIA9 507 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Smg8Q8VE18 991 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 CarfQ8VHI4 689 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Mad2l1Q9Z1B5 205 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Spata31d1dE9Q5W2 1247 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Pros1Q08761 675 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 N6amt1Q6SKR2 214 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Ctxn3Q8BXZ0 80 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Pcdha1Q91Y21 948 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Krt88Q9CPR6 171 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Adam28Q9JLN6 793 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Ripk3Q9QZL0 486 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Vmn1r2A2AMT6 306 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Fam171a1A2ATK9 892 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Ssxb6A2BI74 170 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Olfr171G5E8J1 314 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Pcbp1P60335 356 aaKnown RBP11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Brf2Q3UAW9 420 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Slitrk3Q810B9 980 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 LaynQ8C351 381 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Ahsa2Q8N9S3 331 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Vmn1r64Q8R2B8 320 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Camkk1Q8VBY2 505 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Reep3Q99KK1 254 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 GmfbQ9CQI3 142 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 VarsQ9Z1Q9 1263 aaKnown RBP11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Rnf169E9Q7F2 694 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Il27raO70394 623 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Gm5800Q497L3 186 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Tmprss11eQ5S248 423 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Zfp438Q8BFX2 798 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 RfkQ8CFV9 155 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Alg3Q8K2A8 438 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 GldcQ91W43 1025 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Prl2a1Q9JHK0 228 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Klrc2Q9WTJ9 238 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Abcc10Q8R4P9 1501 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Ighv11-2A0A075B5R8 117 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Gm14401A2ARV7 303 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Ap2m1P84091 435 aaKnown RBP11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 ProcrQ64695 242 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Snrnp25Q8VIK1 123 aa11.91□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 62.8 ms