RNA–Protein interactions for RNA: ENSMUST00000029480.8

Prpf38b-201, Transcript of Pre-mRNA-splicing factor 38B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf38b, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38b-201ENSMUST00000029480 Il17reQ8BH06 637 aa13.31□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Ubap2Q91VX2 1132 aaKnown RBP13.31□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 NtpcrQ9CQA9 190 aaKnown RBP13.31□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Nek6Q9ES70 313 aa13.31□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Tpk1Q9R0M5 243 aa13.31□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Keap1Q9Z2X8 624 aaKnown RBP13.31□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Atg2aQ6P4T0 1914 aa13.31□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Cyp2b13A6H6J2 491 aa13.31□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Trim15G3UY57 292 aa13.31□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Ppm1aP49443 382 aa13.31□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 TdgP56581 421 aa13.31□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 AxlQ00993 888 aa13.31□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Pfdn6Q03958 127 aa13.31□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Tekt4Q149S1 447 aa13.31□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Ccdc61Q3UJV1 511 aa13.31□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Esrp1Q3US41 680 aaKnown RBP13.31□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Cbx5Q61686 191 aaKnown RBP13.31□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Ssx9Q6XAS3 170 aa13.31□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Nmur2Q8BZ39 395 aa13.31□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Ephb1Q8CBF3 984 aa13.31□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Fem1cQ8CEF1 617 aa13.31□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 HpdlQ8K248 371 aa13.31□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Irak3Q8K4B2 609 aa13.31□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Mtfr2Q8VED8 361 aa13.31□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 FtcdQ91XD4 541 aa13.31□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Necab2Q91ZP9 389 aa13.31□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Emc3Q99KI3 261 aa13.31□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Arpc2Q9CVB6 300 aa13.31□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Cnbd2Q9D5U8 673 aa13.31□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Asah2Q9JHE3 756 aa13.31□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Tagln3Q9R1Q8 199 aa13.31□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Asb4Q9WV71 426 aa13.31□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Sypl2O89104 264 aa13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Rps3P62908 243 aaKnown RBP13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Tuba1cP68373 449 aaKnown RBP13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Itgb8Q0VBD0 767 aa13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Fam47cQ14BE7 430 aa13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 6430531B16RikQ3V2J1 307 aa13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Ggnbp1Q6K1E7 370 aa13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Podnl1Q6P3Y9 559 aa13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Dpy19l3Q71B07 716 aa13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Olfr813Q7TRH5 310 aa13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Zbtb41Q811F1 908 aa13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Clrn3Q8BHH8 226 aa13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Sphk1Q8CI15 382 aa13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Sf3b4Q8QZY9 424 aaKnown RBP13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Gsg1Q8R1W2 324 aa13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Eps8l3Q91WL0 600 aa13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Catsper1Q91ZR5 686 aa13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Psmd12Q9D8W5 456 aa13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 NvlQ9DBY8 855 aaKnown RBP13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Paqr5Q9DCU0 330 aa13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Dach1Q9QYB2 751 aa13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Gpc1Q9QZF2 557 aa13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Psmd13Q9WVJ2 376 aa13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Zdbf2Q5SS00 2493 aaKnown RBP13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Rnf19bA2A7Q9 732 aa13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Mageb4A2A9R3 556 aa13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Pramef17A2ASJ1 475 aa13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Arhgef26D3YYY8 869 aa13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Calhm3J3QMI4 347 aa13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Mapk12O08911 367 aa13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Fkbp7O54998 218 aa13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Stam2O88811 523 aa13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Mthfd2P18155 350 aaKnown RBP13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Matn1P51942 500 aaKnown RBP13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Pex2P55098 305 aa13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Gpatch4Q3TFK5 415 aaKnown RBP13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Crhr2Q60748 411 aa13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 PtprrQ62132 656 aa13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 SvoplQ6PDF3 494 aa13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Zmpste24Q80W54 475 aa13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Slc36a3Q811P0 477 aa13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Iars2Q8BIJ6 1012 aa13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Cndp1Q8BUG2 492 aa13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Sirt5Q8K2C6 310 aa13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Zc3h10Q8R205 435 aaKnown RBP13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Rps6kl1Q8R2S1 544 aa13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Ifi44lQ9BDB7 447 aa13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Cox16Q9CR63 106 aa13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 4930513O06RikQ9D549 161 aa13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 ScelQ9EQG3 652 aa13.3□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Ttll9A2APC3 461 aa13.29□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 P01644 108 aa13.29□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 P01645 108 aa13.29□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 P01646 108 aa13.29□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 P01647 108 aa13.29□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Lhx3P50481 400 aa13.29□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Fdft1P53798 416 aa13.29□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Kcnj8P97794 424 aa13.29□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 HmgcrQ01237 887 aa13.29□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Sarm1Q6PDS3 724 aa13.29□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Kctd20Q8CDD8 419 aa13.29□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Snx9Q91VH2 595 aa13.29□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Atpaf2Q91YY4 289 aa13.29□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Rad51cQ924H5 366 aa13.29□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 GsdmcQ99NB5 468 aa13.29□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Dnajb4Q9D832 337 aa13.29□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Rmdn1Q9DCV4 305 aa13.29□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Ndst3Q9EQH7 873 aa13.29□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 31.3 ms