RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Srbd1Q497V5 1015 aaKnown RBP10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Eif2dQ61211 570 aaKnown RBP10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Vmn1r24Q8R2D6 296 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Fbxo21Q8VDH1 627 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Arhgef3Q91X46 524 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Wrnip1Q91XU0 660 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Cyp2c55Q9D816 490 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Cdh13Q9WTR5 714 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Il18rapQ9Z2B1 614 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Slc4a11A2AJN7 862 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Slfn9B1ARD6 910 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Zfp938E9Q9G3 579 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Hoxc6P10629 235 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 RxrbP28704 520 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Aqp4P55088 323 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 BcheQ03311 603 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Neurl1bQ0MW30 546 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Slc6a3Q61327 619 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 PhykplQ8R1K4 467 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Map3k21Q8VDG6 1002 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Prg3Q9JL95 222 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 B3galt4Q9Z0F0 371 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Olfr391-psA0A0U1RNJ4 312 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Gm13040A2A8C4 496 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Slc25a54B1AUS6 473 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 PiggD3Z3Y1 983 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Vmn2r55G3UWZ4 781 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Vmn2r53L7N473 806 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 DldO08749 509 aaKnown RBP10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Mapk12O08911 367 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Ptpn9O35239 593 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Eno2P17183 434 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Npr1P18293 1057 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 GuloP58710 440 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Mkl2P59759 1080 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Nudt18Q3U2V3 323 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Tfap2bQ61313 459 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Kcna4Q61423 654 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Nrg1Q6DR99 700 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Sema3dQ8BH34 777 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Dnajc18Q9CZJ9 357 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Hm13Q9D8V0 378 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Jph1Q9ET80 660 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 St6galnac1Q9QZ39 526 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 TesminQ9WTJ6 475 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Nwd1A6H603 1563 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Kidins220E9Q9B7 1793 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Ptpn3A2ALK8 913 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 F6Y6L6 278 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Cd3gP11942 182 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 MutP16332 748 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Ndst1Q3UHN9 882 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Usp30Q3UN04 517 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Psmd11Q8BG32 422 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Rbm47Q91WT8 590 aaKnown RBP10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Lpin3Q99PI4 848 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Cnot11Q9CWN7 505 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Nufip1Q9QXX8 484 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Tmem245B1AZA5 876 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Zscan5bB2RTN3 468 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Gm3696K7N751 203 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Hs3st1O35310 311 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Kcnj12P52187 427 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Dsg1bQ7TSF1 1060 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Rcor1Q8CFE3 480 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Acsf2Q8VCW8 615 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Lrrc49Q91YK0 686 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 HlcsQ920N2 722 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Cybrd1Q925G2 290 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Rtfdc1Q99K95 307 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 GmfbQ9CQI3 142 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Mau2Q9D2X5 619 aaKnown RBP10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 C87414E9PWI7 475 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Gm4302E9PX25 294 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Gm7945F6QI24 236 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 2610028H24RikG5E8K1 270 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 CyctP00015 105 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 TnfP06804 235 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 JundP15066 341 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Gng2P63213 71 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Srebf2Q3U1N2 1130 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Zfp78Q5U406 512 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Olfr1505Q7TQQ2 316 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Krt88Q9CPR6 171 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Grm3Q9QYS2 879 aa10.12□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Prrg1A2BFE8 218 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Rdh8D3Z6W3 317 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Vbp1P61759 196 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 RogdiQ3TDK6 287 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Prickle1Q3U5C7 832 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 SynaQ5G5D5 617 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Scarf1Q5ND28 820 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 CltbQ6IRU5 229 aaKnown RBP10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 GskipQ8BGR8 139 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Amz1Q8BVF9 502 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 AA792892Q8C6S1 278 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Tsen15Q8R3W5 168 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 SncaipQ99ME3 962 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Gm3033M0QWI0 180 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Gm3532M0QWL4 194 aa10.11□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 40.9 ms