RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 PhexP70669 749 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Znf280cQ6P3Y5 742 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 NpntQ91V88 561 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Sh3d19Q91X43 789 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Tpgs1Q99MS8 303 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Katnbl1Q9CWJ3 299 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Vps35Q9EQH3 796 aaKnown RBP16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Smpd3Q9JJY3 655 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Cngb3Q9JJZ9 694 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 H2afyQ9QZQ8 372 aaKnown RBP16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Gm3604A0A087WPN2 559 aa16.18■□□□□ 0.18
Trim28-201ENSMUST00000005705 Adamts14E9PX39 1209 aa16.18■□□□□ 0.18
Trim28-201ENSMUST00000005705 Zfp882E9Q4R4 555 aa16.18■□□□□ 0.18
Trim28-201ENSMUST00000005705 Olfr596F8VQ26 312 aa16.18■□□□□ 0.18
Trim28-201ENSMUST00000005705 Usp2O88623 613 aa16.18■□□□□ 0.18
Trim28-201ENSMUST00000005705 Ap2a2P17427 938 aaKnown RBP16.18■□□□□ 0.18
Trim28-201ENSMUST00000005705 Slc11a2P49282 568 aa16.18■□□□□ 0.18
Trim28-201ENSMUST00000005705 IqcmQ149I8 489 aa16.18■□□□□ 0.18
Trim28-201ENSMUST00000005705 CblbQ3TTA7 982 aa16.18■□□□□ 0.18
Trim28-201ENSMUST00000005705 Gpr162Q3UN16 588 aa16.18■□□□□ 0.18
Trim28-201ENSMUST00000005705 Cyp2c66Q5GLZ0 490 aa16.18■□□□□ 0.18
Trim28-201ENSMUST00000005705 Tfap2cQ61312 449 aa16.18■□□□□ 0.18
Trim28-201ENSMUST00000005705 Igfbp7Q61581 281 aa16.18■□□□□ 0.18
Trim28-201ENSMUST00000005705 Mapk10Q61831 464 aa16.18■□□□□ 0.18
Trim28-201ENSMUST00000005705 Fastkd5Q7TMV3 762 aa16.18■□□□□ 0.18
Trim28-201ENSMUST00000005705 Tspan18Q80WR1 248 aa16.18■□□□□ 0.18
Trim28-201ENSMUST00000005705 Amigo2Q80ZD9 519 aa16.18■□□□□ 0.18
Trim28-201ENSMUST00000005705 Kank2Q8BX02 843 aa16.18■□□□□ 0.18
Trim28-201ENSMUST00000005705 Abhd11Q8K4F5 307 aa16.18■□□□□ 0.18
Trim28-201ENSMUST00000005705 Pycr2Q922Q4 320 aaKnown RBP16.18■□□□□ 0.18
Trim28-201ENSMUST00000005705 DhddsQ99KU1 333 aa16.18■□□□□ 0.18
Trim28-201ENSMUST00000005705 Pwp1Q99LL5 501 aaKnown RBP16.18■□□□□ 0.18
Trim28-201ENSMUST00000005705 Q9D3J9 298 aa16.18■□□□□ 0.18
Trim28-201ENSMUST00000005705 Thap11Q9JJD0 305 aa16.18■□□□□ 0.18
Trim28-201ENSMUST00000005705 Il18rapQ9Z2B1 614 aa16.18■□□□□ 0.18
Trim28-201ENSMUST00000005705 Gm3636E9Q5P1 227 aa16.18■□□□□ 0.18
Trim28-201ENSMUST00000005705 InaP46660 501 aa16.18■□□□□ 0.18
Trim28-201ENSMUST00000005705 Rpl26P61255 145 aaKnown RBP16.18■□□□□ 0.18
Trim28-201ENSMUST00000005705 Cd300lgQ1ERP8 331 aa16.18■□□□□ 0.18
Trim28-201ENSMUST00000005705 Gpr21Q8BX79 349 aa16.18■□□□□ 0.18
Trim28-201ENSMUST00000005705 Slc46a2Q8CA03 479 aa16.18■□□□□ 0.18
Trim28-201ENSMUST00000005705 Dclre1cQ8K4J0 705 aa16.18■□□□□ 0.18
Trim28-201ENSMUST00000005705 Stk32cQ8QZV4 488 aa16.18■□□□□ 0.18
Trim28-201ENSMUST00000005705 Socs7Q8VHQ2 579 aa16.18■□□□□ 0.18
Trim28-201ENSMUST00000005705 Adam33Q923W9 797 aa16.18■□□□□ 0.18
Trim28-201ENSMUST00000005705 Idh3aQ9D6R2 366 aaKnown RBP16.18■□□□□ 0.18
Trim28-201ENSMUST00000005705 Pold3Q9EQ28 462 aa16.18■□□□□ 0.18
Trim28-201ENSMUST00000005705 Trhr2Q9ERT2 382 aa16.18■□□□□ 0.18
Trim28-201ENSMUST00000005705 Actl7aQ9QY84 440 aa16.18■□□□□ 0.18
Trim28-201ENSMUST00000005705 Gm43951A0A0N4SUT6 962 aa16.17■□□□□ 0.18
Trim28-201ENSMUST00000005705 Gm45713A0A1B0GS68 446 aa16.17■□□□□ 0.18
Trim28-201ENSMUST00000005705 C1qbP14106 253 aa16.17■□□□□ 0.18
Trim28-201ENSMUST00000005705 Stt3bQ3TDQ1 823 aa16.17■□□□□ 0.18
Trim28-201ENSMUST00000005705 Sox11Q7M6Y2 395 aa16.17■□□□□ 0.18
Trim28-201ENSMUST00000005705 NamptQ99KQ4 491 aa16.17■□□□□ 0.18
Trim28-201ENSMUST00000005705 Ttc25Q9D4B2 624 aa16.17■□□□□ 0.18
Trim28-201ENSMUST00000005705 Spata9Q9D9R3 252 aa16.17■□□□□ 0.18
Trim28-201ENSMUST00000005705 Jam2Q9JI59 298 aa16.17■□□□□ 0.18
Trim28-201ENSMUST00000005705 St6galnac4Q9R2B6 360 aa16.17■□□□□ 0.18
Trim28-201ENSMUST00000005705 Psmb9P28076 219 aa16.17■□□□□ 0.18
Trim28-201ENSMUST00000005705 Fam131bQ3TY60 332 aa16.17■□□□□ 0.18
Trim28-201ENSMUST00000005705 Fam20cQ5MJS3 579 aa16.17■□□□□ 0.18
Trim28-201ENSMUST00000005705 Fscn1Q61553 493 aa16.17■□□□□ 0.18
Trim28-201ENSMUST00000005705 Clec7aQ6QLQ4 244 aa16.17■□□□□ 0.18
Trim28-201ENSMUST00000005705 Pcid2Q8BFV2 399 aaKnown RBP16.17■□□□□ 0.18
Trim28-201ENSMUST00000005705 Ctxn3Q8BXZ0 80 aa16.17■□□□□ 0.18
Trim28-201ENSMUST00000005705 CinpQ9D0V8 212 aa16.17■□□□□ 0.18
Trim28-201ENSMUST00000005705 AgkQ9ESW4 421 aa16.17■□□□□ 0.18
Trim28-201ENSMUST00000005705 CtszQ9WUU7 306 aa16.17■□□□□ 0.18
Trim28-201ENSMUST00000005705 Pramef20B1ARV6 477 aa16.17■□□□□ 0.18
Trim28-201ENSMUST00000005705 TpteG5E8H5 664 aa16.17■□□□□ 0.18
Trim28-201ENSMUST00000005705 Olfr743L7N1Y2 311 aa16.17■□□□□ 0.18
Trim28-201ENSMUST00000005705 Gdf5P43027 495 aa16.17■□□□□ 0.18
Trim28-201ENSMUST00000005705 Gdf7P43029 461 aa16.17■□□□□ 0.18
Trim28-201ENSMUST00000005705 Ppp3cbP48453 525 aa16.17■□□□□ 0.18
Trim28-201ENSMUST00000005705 Txnl4aP83877 142 aa16.17■□□□□ 0.18
Trim28-201ENSMUST00000005705 Cpne9Q1RLL3 553 aa16.17■□□□□ 0.18
Trim28-201ENSMUST00000005705 Rabl6Q5U3K5 725 aa16.17■□□□□ 0.18
Trim28-201ENSMUST00000005705 Gpr19Q61121 415 aa16.17■□□□□ 0.18
Trim28-201ENSMUST00000005705 Samd4bQ80XS6 687 aa16.17■□□□□ 0.18
Trim28-201ENSMUST00000005705 4933402J07RikQ8BHX0 270 aa16.17■□□□□ 0.18
Trim28-201ENSMUST00000005705 Pdcd2lQ8C5N5 364 aa16.17■□□□□ 0.18
Trim28-201ENSMUST00000005705 Vps39Q8R5L3 886 aa16.17■□□□□ 0.18
Trim28-201ENSMUST00000005705 Rsph1Q8VIG3 301 aa16.17■□□□□ 0.18
Trim28-201ENSMUST00000005705 Tmem86aQ9D8N3 241 aa16.17■□□□□ 0.18
Trim28-201ENSMUST00000005705 Slc28a3Q9ERH8 703 aa16.17■□□□□ 0.18
Trim28-201ENSMUST00000005705 Aff4Q9ESC8 1160 aa16.17■□□□□ 0.18
Trim28-201ENSMUST00000005705 PtsQ9R1Z7 144 aa16.17■□□□□ 0.18
Trim28-201ENSMUST00000005705 4921501E09RikA0A0R4J054 908 aa16.16■□□□□ 0.18
Trim28-201ENSMUST00000005705 Krt1P04104 637 aa16.16■□□□□ 0.18
Trim28-201ENSMUST00000005705 PolP11369 1281 aa16.16■□□□□ 0.18
Trim28-201ENSMUST00000005705 Cdh9P70407 786 aa16.16■□□□□ 0.18
Trim28-201ENSMUST00000005705 Gsdmc2Q2KHK6 480 aa16.16■□□□□ 0.18
Trim28-201ENSMUST00000005705 Slc22a23Q3UHH2 689 aa16.16■□□□□ 0.18
Trim28-201ENSMUST00000005705 Znf235Q61116 645 aa16.16■□□□□ 0.18
Trim28-201ENSMUST00000005705 Smarcd1Q61466 515 aaKnown RBP16.16■□□□□ 0.18
Trim28-201ENSMUST00000005705 MroQ7TNB4 248 aa16.16■□□□□ 0.18
Trim28-201ENSMUST00000005705 Zfp418Q8BFS8 652 aa16.16■□□□□ 0.18
Trim28-201ENSMUST00000005705 Gsdmc3Q8CB12 480 aa16.16■□□□□ 0.18
Trim28-201ENSMUST00000005705 Usp45Q8K387 813 aa16.16■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 29.5 ms