RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 FDXRP22570 491 aa13.81□□□□□ -0.2
PHGDH-233ENST00000642021 HTR7P34969 479 aa13.81□□□□□ -0.2
PHGDH-233ENST00000642021 DIO3P55073 304 aa13.81□□□□□ -0.2
PHGDH-233ENST00000642021 NFKB2Q00653 900 aa13.81□□□□□ -0.2
PHGDH-233ENST00000642021 ERI1Q8IV48 349 aaKnown RBP13.81□□□□□ -0.2
PHGDH-233ENST00000642021 SCN4BQ8IWT1 228 aa13.81□□□□□ -0.2
PHGDH-233ENST00000642021 DDIASQ8IXT1 998 aa13.81□□□□□ -0.2
PHGDH-233ENST00000642021 UMODL1-AS1Q8N2C9 162 aa13.81□□□□□ -0.2
PHGDH-233ENST00000642021 ZUFSPQ96AP4 578 aa13.81□□□□□ -0.2
PHGDH-233ENST00000642021 TEX37Q96LM6 180 aa13.81□□□□□ -0.2
PHGDH-233ENST00000642021 SLC52A3Q9NQ40 469 aa13.81□□□□□ -0.2
PHGDH-233ENST00000642021 WASH4PA8MWX3 477 aa13.8□□□□□ -0.2
PHGDH-233ENST00000642021 AZIN1O14977 448 aa13.8□□□□□ -0.2
PHGDH-233ENST00000642021 GOT2P00505 430 aaKnown RBP13.8□□□□□ -0.2
PHGDH-233ENST00000642021 STT3AP46977 705 aa13.8□□□□□ -0.2
PHGDH-233ENST00000642021 GALK1P51570 392 aa13.8□□□□□ -0.2
PHGDH-233ENST00000642021 C9orf131Q5VYM1 1079 aa13.8□□□□□ -0.2
PHGDH-233ENST00000642021 ZNF354CQ86Y25 554 aa13.8□□□□□ -0.2
PHGDH-233ENST00000642021 OR13C4Q8NGS5 318 aa13.8□□□□□ -0.2
PHGDH-233ENST00000642021 RSPH1Q8WYR4 309 aa13.8□□□□□ -0.2
PHGDH-233ENST00000642021 AGPAT4Q9NRZ5 378 aa13.8□□□□□ -0.2
PHGDH-233ENST00000642021 THEGQ9P2T0 379 aa13.8□□□□□ -0.2
PHGDH-233ENST00000642021 EBF1Q9UH73 591 aa13.8□□□□□ -0.2
PHGDH-233ENST00000642021 IKZF3Q9UKT9 509 aa13.8□□□□□ -0.2
PHGDH-233ENST00000642021 SLC8A2Q9UPR5 921 aa13.8□□□□□ -0.2
PHGDH-233ENST00000642021 SEC24DO94855 1032 aaPredicted RBP13.8□□□□□ -0.2
PHGDH-233ENST00000642021 TBX18O95935 607 aa13.8□□□□□ -0.2
PHGDH-233ENST00000642021 MTHFD1P11586 935 aaKnown RBP13.8□□□□□ -0.2
PHGDH-233ENST00000642021 HGFP14210 728 aa13.8□□□□□ -0.2
PHGDH-233ENST00000642021 CES1P23141 567 aa13.8□□□□□ -0.2
PHGDH-233ENST00000642021 SLC26A3P40879 764 aa13.8□□□□□ -0.2
PHGDH-233ENST00000642021 GPR15P49685 360 aa13.8□□□□□ -0.2
PHGDH-233ENST00000642021 MYBPC3Q14896 1274 aa13.8□□□□□ -0.2
PHGDH-233ENST00000642021 FSCN1Q16658 493 aaKnown RBP13.8□□□□□ -0.2
PHGDH-233ENST00000642021 MORN1Q5T089 497 aa13.8□□□□□ -0.2
PHGDH-233ENST00000642021 TAF2Q6P1X5 1199 aa13.8□□□□□ -0.2
PHGDH-233ENST00000642021 GALNT7Q86SF2 657 aa13.8□□□□□ -0.2
PHGDH-233ENST00000642021 LRRC49Q8IUZ0 686 aa13.8□□□□□ -0.2
PHGDH-233ENST00000642021 ZNF786Q8N393 782 aa13.8□□□□□ -0.2
PHGDH-233ENST00000642021 MINDY1Q8N5J2 469 aa13.8□□□□□ -0.2
PHGDH-233ENST00000642021 TUBGCP3Q96CW5 907 aa13.8□□□□□ -0.2
PHGDH-233ENST00000642021 LRRC58Q96CX6 371 aa13.8□□□□□ -0.2
PHGDH-233ENST00000642021 HOPXQ9BPY8 73 aaPredicted RBP13.8□□□□□ -0.2
PHGDH-233ENST00000642021 AP5M1Q9H0R1 490 aa13.8□□□□□ -0.2
PHGDH-233ENST00000642021 PRDM5Q9NQX1 630 aaPredicted RBP13.8□□□□□ -0.2
PHGDH-233ENST00000642021 TRPV2Q9Y5S1 764 aa13.8□□□□□ -0.2
PHGDH-233ENST00000642021 CCDC162PA2VCL2 907 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 TMX2-CTNND1H3BSU7 103 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 M0QZQ0 153 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 MUSKO15146 869 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 SLC2A3P11169 496 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 ZNF37AP17032 561 aaPredicted RBP13.79□□□□□ -0.2
PHGDH-233ENST00000642021 ATP6V0D1P61421 351 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 TUBA4AP68366 448 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 MAP2K5Q13163 448 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 RABL3Q5HYI8 236 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 MS4A13Q5J8X5 152 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 IFNEQ86WN2 208 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 CIR1Q86X95 450 aaPredicted RBP13.79□□□□□ -0.2
PHGDH-233ENST00000642021 SPATA2LQ8IUW3 424 aaPredicted RBP13.79□□□□□ -0.2
PHGDH-233ENST00000642021 ADGRG5Q8IZF4 528 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 MIER2Q8N344 545 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 MFSD2AQ8NA29 543 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 DNAJB14Q8TBM8 379 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 HM13Q8TCT9 377 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 BLOC1S5Q8TDH9 187 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 IGSF8Q969P0 613 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 VPS33AQ96AX1 596 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 SLC39A13Q96H72 371 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 C1orf74Q96LT6 269 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 ATOH8Q96SQ7 321 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 ADI1Q9BV57 179 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 TRIM62Q9BVG3 475 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 SDR39U1Q9NRG7 319 aaPredicted RBP13.79□□□□□ -0.2
PHGDH-233ENST00000642021 POLG2Q9UHN1 485 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 OAZ3Q9UMX2 235 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 NDUFAF1Q9Y375 327 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 TIMM22Q9Y584 194 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 LOC285095A0A1B0GVY8 99 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 AQP12BA6NM10 295 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 M0QZ92 97 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 ANGPT2O15123 496 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 ACOX3O15254 700 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 CLASP2O75122 1294 aaKnown RBP13.79□□□□□ -0.2
PHGDH-233ENST00000642021 BMP10O95393 424 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 STAMBPO95630 424 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 HSD17B1P14061 328 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 MERTKQ12866 999 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 DCTN2Q13561 401 aaKnown RBP13.79□□□□□ -0.2
PHGDH-233ENST00000642021 DDR2Q16832 855 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 IRAK1BP1Q5VVH5 260 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 KANK2Q63ZY3 851 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 GDF6Q6KF10 455 aaPredicted RBP13.79□□□□□ -0.2
PHGDH-233ENST00000642021 AQP12AQ8IXF9 295 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 CPNE9Q8IYJ1 553 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 SP110Q9HB58 689 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 SLAMF8Q9P0V8 285 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 SQORQ9Y6N5 450 aa13.79□□□□□ -0.2
PHGDH-233ENST00000642021 CROCCQ5TZA2 2017 aa13.78□□□□□ -0.2
PHGDH-233ENST00000642021 BBIP1A8MTZ0 92 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms