RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 ZFP36L1Q07352 338 aaKnown RBP10.05□□□□□ -0.8
PHGDH-222ENST00000641587 C16orf72Q14CZ0 275 aa10.05□□□□□ -0.8
PHGDH-222ENST00000641587 TMEM52BQ4KMG9 183 aa10.05□□□□□ -0.8
PHGDH-222ENST00000641587 BOLA3Q53S33 107 aa10.05□□□□□ -0.8
PHGDH-222ENST00000641587 PPP6R3Q5H9R7 873 aaPredicted RBP10.05□□□□□ -0.8
PHGDH-222ENST00000641587 ERMARDQ5T6L9 678 aa10.05□□□□□ -0.8
PHGDH-222ENST00000641587 PHF19Q5T6S3 580 aa10.05□□□□□ -0.8
PHGDH-222ENST00000641587 ACBD5Q5T8D3 534 aaPredicted RBP10.05□□□□□ -0.8
PHGDH-222ENST00000641587 PAPD7Q5XG87 772 aaKnown RBP10.05□□□□□ -0.8
PHGDH-222ENST00000641587 LVRNQ6Q4G3 990 aa10.05□□□□□ -0.8
PHGDH-222ENST00000641587 SPRED1Q7Z699 444 aa10.05□□□□□ -0.8
PHGDH-222ENST00000641587 GKN2Q86XP6 184 aa10.05□□□□□ -0.8
PHGDH-222ENST00000641587 DTX1Q86Y01 620 aa10.05□□□□□ -0.8
PHGDH-222ENST00000641587 PTRH1Q86Y79 214 aaKnown RBP10.05□□□□□ -0.8
PHGDH-222ENST00000641587 SLITRK4Q8IW52 837 aa10.05□□□□□ -0.8
PHGDH-222ENST00000641587 KATNAL2Q8IYT4 538 aa10.05□□□□□ -0.8
PHGDH-222ENST00000641587 KCTD6Q8NC69 237 aa10.05□□□□□ -0.8
PHGDH-222ENST00000641587 TEKT4Q8WW24 435 aa10.05□□□□□ -0.8
PHGDH-222ENST00000641587 SCG3Q8WXD2 468 aaKnown RBP10.05□□□□□ -0.8
PHGDH-222ENST00000641587 RNF25Q96BH1 459 aaPredicted RBP10.05□□□□□ -0.8
PHGDH-222ENST00000641587 TBC1D31Q96DN5 1066 aa10.05□□□□□ -0.8
PHGDH-222ENST00000641587 HMCESQ96FZ2 354 aa10.05□□□□□ -0.8
PHGDH-222ENST00000641587 PBKQ96KB5 322 aa10.05□□□□□ -0.8
PHGDH-222ENST00000641587 WDR92Q96MX6 357 aa10.05□□□□□ -0.8
PHGDH-222ENST00000641587 RBM15Q96T37 977 aaKnown RBP eCLIP10.05□□□□□ -0.84e-7■■■□□ 17.3
PHGDH-222ENST00000641587 MAGEH1Q9H213 219 aa10.05□□□□□ -0.8
PHGDH-222ENST00000641587 SEMA6CQ9H3T2 930 aa10.05□□□□□ -0.8
PHGDH-222ENST00000641587 RDH14Q9HBH5 336 aa10.05□□□□□ -0.8
PHGDH-222ENST00000641587 FGF22Q9HCT0 170 aa10.05□□□□□ -0.8
PHGDH-222ENST00000641587 PCDH12Q9NPG4 1184 aa10.05□□□□□ -0.8
PHGDH-222ENST00000641587 TMEM51Q9NW97 253 aa10.05□□□□□ -0.8
PHGDH-222ENST00000641587 LHX3Q9UBR4 397 aa10.05□□□□□ -0.8
PHGDH-222ENST00000641587 HPCAL4Q9UM19 191 aa10.05□□□□□ -0.8
PHGDH-222ENST00000641587 TOR1BO14657 336 aa10.04□□□□□ -0.8
PHGDH-222ENST00000641587 ZNF185O15231 689 aa10.04□□□□□ -0.8
PHGDH-222ENST00000641587 ZRANB2O95218 330 aaKnown RBP eCLIP10.04□□□□□ -0.8
PHGDH-222ENST00000641587 CCL4P13236 92 aa10.04□□□□□ -0.8
PHGDH-222ENST00000641587 XPAP23025 273 aaPredicted RBP10.04□□□□□ -0.8
PHGDH-222ENST00000641587 HTR1BP28222 390 aa10.04□□□□□ -0.8
PHGDH-222ENST00000641587 LIG3P49916 1009 aa10.04□□□□□ -0.8
PHGDH-222ENST00000641587 PEX5P50542 639 aa10.04□□□□□ -0.8
PHGDH-222ENST00000641587 ARSDP51689 593 aa10.04□□□□□ -0.8
PHGDH-222ENST00000641587 AIF1P55008 147 aa10.04□□□□□ -0.8
PHGDH-222ENST00000641587 MAZP56270 477 aaKnown RBP10.04□□□□□ -0.8
PHGDH-222ENST00000641587 NRG1Q02297 640 aaPredicted RBP10.04□□□□□ -0.8
PHGDH-222ENST00000641587 LLGL1Q15334 1064 aa10.04□□□□□ -0.8
PHGDH-222ENST00000641587 CYTH1Q15438 398 aa10.04□□□□□ -0.8
PHGDH-222ENST00000641587 CERCAMQ5T4B2 595 aa10.04□□□□□ -0.8
PHGDH-222ENST00000641587 KAZNQ674X7 775 aa10.04□□□□□ -0.8
PHGDH-222ENST00000641587 CYP4V2Q6ZWL3 525 aaPredicted RBP10.04□□□□□ -0.8
PHGDH-222ENST00000641587 TAF8Q7Z7C8 310 aa10.04□□□□□ -0.8
PHGDH-222ENST00000641587 LURAP1LQ8IV03 231 aa10.04□□□□□ -0.8
PHGDH-222ENST00000641587 MAP7D3Q8IWC1 876 aa10.04□□□□□ -0.8
PHGDH-222ENST00000641587 RCOR2Q8IZ40 523 aa10.04□□□□□ -0.8
PHGDH-222ENST00000641587 PELI3Q8N2H9 469 aa10.04□□□□□ -0.8
PHGDH-222ENST00000641587 RCBTB1Q8NDN9 531 aa10.04□□□□□ -0.8
PHGDH-222ENST00000641587 FAM46DQ8NEK8 389 aa10.04□□□□□ -0.8
PHGDH-222ENST00000641587 EXD1Q8NHP7 514 aa10.04□□□□□ -0.8
PHGDH-222ENST00000641587 COG1Q8WTW3 980 aa10.04□□□□□ -0.8
PHGDH-222ENST00000641587 RAPGEF5Q92565 580 aa10.04□□□□□ -0.8
PHGDH-222ENST00000641587 NTAN1Q96AB6 310 aa10.04□□□□□ -0.8
PHGDH-222ENST00000641587 TMEM168Q9H0V1 697 aa10.04□□□□□ -0.8
PHGDH-222ENST00000641587 CARD9Q9H257 536 aa10.04□□□□□ -0.8
PHGDH-222ENST00000641587 SUDS3Q9H7L9 328 aaPredicted RBP10.04□□□□□ -0.8
PHGDH-222ENST00000641587 SEPT10Q9P0V9 454 aa10.04□□□□□ -0.8
PHGDH-222ENST00000641587 DKK3Q9UBP4 350 aa10.04□□□□□ -0.8
PHGDH-222ENST00000641587 APPL1Q9UKG1 709 aa10.04□□□□□ -0.8
PHGDH-222ENST00000641587 FZD10Q9ULW2 581 aa10.04□□□□□ -0.8
PHGDH-222ENST00000641587 CXorf51AA0A1B0GTR3 108 aa10.03□□□□□ -0.8
PHGDH-222ENST00000641587 H3BRJ5 948 aa10.03□□□□□ -0.8
PHGDH-222ENST00000641587 TMX2-CTNND1H3BSU7 103 aa10.03□□□□□ -0.8
PHGDH-222ENST00000641587 PGRMC1O00264 195 aaKnown RBP10.03□□□□□ -0.8
PHGDH-222ENST00000641587 CREB3O43889 395 aa10.03□□□□□ -0.8
PHGDH-222ENST00000641587 PPFIA2O75334 1257 aa10.03□□□□□ -0.8
PHGDH-222ENST00000641587 TNFP01375 233 aa10.03□□□□□ -0.8
PHGDH-222ENST00000641587 PYGMP11217 842 aa10.03□□□□□ -0.8
PHGDH-222ENST00000641587 GLB1P16278 677 aa10.03□□□□□ -0.8
PHGDH-222ENST00000641587 KDELR1P24390 212 aa10.03□□□□□ -0.8
PHGDH-222ENST00000641587 MMP12P39900 470 aa10.03□□□□□ -0.8
PHGDH-222ENST00000641587 ARL4AP40617 200 aa10.03□□□□□ -0.8
PHGDH-222ENST00000641587 PAFAH1B1P43034 410 aa10.03□□□□□ -0.8
PHGDH-222ENST00000641587 RGRP47804 291 aa10.03□□□□□ -0.8
PHGDH-222ENST00000641587 OR1D5P58170 312 aa10.03□□□□□ -0.8
PHGDH-222ENST00000641587 RAD51Q06609 339 aa10.03□□□□□ -0.8
PHGDH-222ENST00000641587 CKAP4Q07065 602 aaKnown RBP10.03□□□□□ -0.8
PHGDH-222ENST00000641587 ELP6Q0PNE2 266 aa10.03□□□□□ -0.8
PHGDH-222ENST00000641587 TUBB2AQ13885 445 aa10.03□□□□□ -0.8
PHGDH-222ENST00000641587 HLTFQ14527 1009 aaKnown RBP eCLIP10.03□□□□□ -0.8
PHGDH-222ENST00000641587 PDK2Q15119 407 aa10.03□□□□□ -0.8
PHGDH-222ENST00000641587 CA9Q16790 459 aa10.03□□□□□ -0.8
PHGDH-222ENST00000641587 UGP2Q16851 508 aa10.03□□□□□ -0.8
PHGDH-222ENST00000641587 SKIDA1Q1XH10 827 aa10.03□□□□□ -0.8
PHGDH-222ENST00000641587 AMZ1Q400G9 498 aa10.03□□□□□ -0.8
PHGDH-222ENST00000641587 MAP9Q49MG5 647 aa10.03□□□□□ -0.8
PHGDH-222ENST00000641587 C14orf28Q4W4Y0 310 aa10.03□□□□□ -0.8
PHGDH-222ENST00000641587 AADACL2Q6P093 401 aa10.03□□□□□ -0.8
PHGDH-222ENST00000641587 MFSD7Q6UXD7 560 aa10.03□□□□□ -0.8
PHGDH-222ENST00000641587 SPOCD1Q6ZMY3 1216 aa10.03□□□□□ -0.8
PHGDH-222ENST00000641587 RFX6Q8HWS3 928 aa10.03□□□□□ -0.8
PHGDH-222ENST00000641587 CAMK1DQ8IU85 385 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms