RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 NAT16Q8N8M0 369 aa17.23■□□□□ 0.35
PHGDH-208ENST00000641023 SGF29Q96ES7 293 aa17.23■□□□□ 0.35
PHGDH-208ENST00000641023 SFXN1Q9H9B4 322 aa17.23■□□□□ 0.35
PHGDH-208ENST00000641023 DUS2Q9NX74 493 aaKnown RBP17.23■□□□□ 0.35
PHGDH-208ENST00000641023 SLCO3A1Q9UIG8 710 aa17.23■□□□□ 0.35
PHGDH-208ENST00000641023 APPL1Q9UKG1 709 aa17.23■□□□□ 0.35
PHGDH-208ENST00000641023 APOBEC2Q9Y235 224 aaKnown RBP17.23■□□□□ 0.35
PHGDH-208ENST00000641023 MYOFQ9NZM1 2061 aa17.22■□□□□ 0.35
PHGDH-208ENST00000641023 CAPN8A6NHC0 703 aa17.22■□□□□ 0.35
PHGDH-208ENST00000641023 SNUPNO95149 360 aaKnown RBP17.22■□□□□ 0.35
PHGDH-208ENST00000641023 PYGLP06737 847 aa17.22■□□□□ 0.35
PHGDH-208ENST00000641023 TFEBP19484 476 aa17.22■□□□□ 0.35
PHGDH-208ENST00000641023 TARSP26639 723 aaKnown RBP17.22■□□□□ 0.35
PHGDH-208ENST00000641023 PBX2P40425 430 aa17.22■□□□□ 0.35
PHGDH-208ENST00000641023 RECQLP46063 649 aaPredicted RBP17.22■□□□□ 0.35
PHGDH-208ENST00000641023 DNAJB13P59910 316 aa17.22■□□□□ 0.35
PHGDH-208ENST00000641023 PFKPQ01813 784 aa17.22■□□□□ 0.35
PHGDH-208ENST00000641023 RCN2Q14257 317 aa17.22■□□□□ 0.35
PHGDH-208ENST00000641023 DHCR24Q15392 516 aa17.22■□□□□ 0.35
PHGDH-208ENST00000641023 PTPRNQ16849 979 aa17.22■□□□□ 0.35
PHGDH-208ENST00000641023 CERS6Q6ZMG9 384 aa17.22■□□□□ 0.35
PHGDH-208ENST00000641023 TAS2R42Q7RTR8 314 aa17.22■□□□□ 0.35
PHGDH-208ENST00000641023 PIWIL4Q7Z3Z4 852 aaKnown RBP17.22■□□□□ 0.35
PHGDH-208ENST00000641023 KIAA0907Q7Z7F0 614 aaPredicted RBP17.22■□□□□ 0.35
PHGDH-208ENST00000641023 OSCP1Q8WVF1 389 aa17.22■□□□□ 0.35
PHGDH-208ENST00000641023 ZNF641Q96N77 438 aaPredicted RBP17.22■□□□□ 0.35
PHGDH-208ENST00000641023 FAM50BQ9Y247 325 aa17.22■□□□□ 0.35
PHGDH-208ENST00000641023 RAP2CQ9Y3L5 183 aa17.22■□□□□ 0.35
PHGDH-208ENST00000641023 NUMBLQ9Y6R0 609 aa17.22■□□□□ 0.35
PHGDH-208ENST00000641023 CHD9Q3L8U1 2897 aa17.22■□□□□ 0.35
PHGDH-208ENST00000641023 A0A1W2PQ67 120 aa17.22■□□□□ 0.35
PHGDH-208ENST00000641023 HNRNPCL1O60812 293 aaKnown RBP17.22■□□□□ 0.35
PHGDH-208ENST00000641023 PKMP14618 531 aaKnown RBP17.22■□□□□ 0.35
PHGDH-208ENST00000641023 ALOX15P16050 662 aaPredicted RBP17.22■□□□□ 0.35
PHGDH-208ENST00000641023 SERPINB5P36952 375 aa17.22■□□□□ 0.35
PHGDH-208ENST00000641023 PTGER3P43115 390 aa17.22■□□□□ 0.35
PHGDH-208ENST00000641023 HK2P52789 917 aa17.22■□□□□ 0.35
PHGDH-208ENST00000641023 ADARP55265 1226 aaKnown RBP17.22■□□□□ 0.35
PHGDH-208ENST00000641023 TIAL1Q01085 375 aaKnown RBP eCLIP17.22■□□□□ 0.35
PHGDH-208ENST00000641023 CTC1Q2NKJ3 1217 aa17.22■□□□□ 0.35
PHGDH-208ENST00000641023 CFAP157Q5JU67 520 aa17.22■□□□□ 0.35
PHGDH-208ENST00000641023 DPY19L3Q6ZPD9 716 aa17.22■□□□□ 0.35
PHGDH-208ENST00000641023 ISCA2Q86U28 154 aa17.22■□□□□ 0.35
PHGDH-208ENST00000641023 ALYREFQ86V81 257 aaKnown RBP17.22■□□□□ 0.35
PHGDH-208ENST00000641023 SLC22A9Q8IVM8 553 aa17.22■□□□□ 0.35
PHGDH-208ENST00000641023 PLPP6Q8IY26 295 aa17.22■□□□□ 0.35
PHGDH-208ENST00000641023 ECHDC3Q96DC8 303 aa17.22■□□□□ 0.35
PHGDH-208ENST00000641023 SCRN2Q96FV2 425 aa17.22■□□□□ 0.35
PHGDH-208ENST00000641023 BIRC8Q96P09 236 aa17.22■□□□□ 0.35
PHGDH-208ENST00000641023 LYSMD1Q96S90 227 aa17.22■□□□□ 0.35
PHGDH-208ENST00000641023 TTC1Q99614 292 aa17.22■□□□□ 0.35
PHGDH-208ENST00000641023 EBF4Q9BQW3 602 aa17.22■□□□□ 0.35
PHGDH-208ENST00000641023 CDH19Q9H159 772 aa17.22■□□□□ 0.35
PHGDH-208ENST00000641023 POMKQ9H5K3 350 aa17.22■□□□□ 0.35
PHGDH-208ENST00000641023 ZDHHC6Q9H6R6 413 aa17.22■□□□□ 0.35
PHGDH-208ENST00000641023 DNAJC28Q9NX36 388 aa17.22■□□□□ 0.35
PHGDH-208ENST00000641023 SLC8A2Q9UPR5 921 aa17.22■□□□□ 0.35
PHGDH-208ENST00000641023 COMMD10Q9Y6G5 202 aa17.22■□□□□ 0.35
PHGDH-208ENST00000641023 F8W8V4 182 aa17.21■□□□□ 0.35
PHGDH-208ENST00000641023 FCHO1O14526 889 aa17.21■□□□□ 0.35
PHGDH-208ENST00000641023 IPO13O94829 963 aaKnown RBP17.21■□□□□ 0.35
PHGDH-208ENST00000641023 PAPLNO95428 1278 aa17.21■□□□□ 0.35
PHGDH-208ENST00000641023 CLDN7O95471 211 aa17.21■□□□□ 0.35
PHGDH-208ENST00000641023 CD1DP15813 335 aa17.21■□□□□ 0.35
PHGDH-208ENST00000641023 PRKAA1Q13131 559 aa17.21■□□□□ 0.35
PHGDH-208ENST00000641023 ARL13AQ5H913 290 aaPredicted RBP17.21■□□□□ 0.35
PHGDH-208ENST00000641023 USP45Q70EL2 814 aa17.21■□□□□ 0.35
PHGDH-208ENST00000641023 ASRGL1Q7L266 308 aa17.21■□□□□ 0.35
PHGDH-208ENST00000641023 PBX4Q9BYU1 374 aa17.21■□□□□ 0.35
PHGDH-208ENST00000641023 NMUR2Q9GZQ4 415 aa17.21■□□□□ 0.35
PHGDH-208ENST00000641023 RASSF4Q9H2L5 321 aa17.21■□□□□ 0.35
PHGDH-208ENST00000641023 ALG9Q9H6U8 611 aa17.21■□□□□ 0.35
PHGDH-208ENST00000641023 HAO1Q9UJM8 370 aa17.21■□□□□ 0.35
PHGDH-208ENST00000641023 FBXO10Q9UK96 956 aa17.21■□□□□ 0.35
PHGDH-208ENST00000641023 ERVW-1Q9UQF0 538 aa17.21■□□□□ 0.35
PHGDH-208ENST00000641023 NPHS1O60500 1241 aa17.2■□□□□ 0.34
PHGDH-208ENST00000641023 VPS26AO75436 327 aa17.2■□□□□ 0.34
PHGDH-208ENST00000641023 CBX6O95503 412 aa17.2■□□□□ 0.34
PHGDH-208ENST00000641023 ADH1CP00326 375 aa17.2■□□□□ 0.34
PHGDH-208ENST00000641023 SERPINA6P08185 405 aa17.2■□□□□ 0.34
PHGDH-208ENST00000641023 CD9P21926 228 aa17.2■□□□□ 0.34
PHGDH-208ENST00000641023 RPL14P50914 215 aaKnown RBP17.2■□□□□ 0.34
PHGDH-208ENST00000641023 POLR2LP62875 67 aaKnown RBP17.2■□□□□ 0.34
PHGDH-208ENST00000641023 CDKN3Q16667 212 aa17.2■□□□□ 0.34
PHGDH-208ENST00000641023 PPP2R2DQ66LE6 453 aa17.2■□□□□ 0.34
PHGDH-208ENST00000641023 TMEM215Q68D42 235 aa17.2■□□□□ 0.34
PHGDH-208ENST00000641023 TRIM67Q6ZTA4 783 aa17.2■□□□□ 0.34
PHGDH-208ENST00000641023 TPRG1Q6ZUI0 275 aa17.2■□□□□ 0.34
PHGDH-208ENST00000641023 Q6ZVU0 165 aa17.2■□□□□ 0.34
PHGDH-208ENST00000641023 ZSWIM9Q86XI8 627 aa17.2■□□□□ 0.34
PHGDH-208ENST00000641023 CCNYL1Q8N7R7 359 aa17.2■□□□□ 0.34
PHGDH-208ENST00000641023 TXNDC5Q8NBS9 432 aaKnown RBP17.2■□□□□ 0.34
PHGDH-208ENST00000641023 CNDP1Q96KN2 507 aa17.2■□□□□ 0.34
PHGDH-208ENST00000641023 LRRC3BQ96PB8 259 aa17.2■□□□□ 0.34
PHGDH-208ENST00000641023 SORCS3Q9UPU3 1222 aa17.2■□□□□ 0.34
PHGDH-208ENST00000641023 PPIL1Q9Y3C6 166 aa17.2■□□□□ 0.34
PHGDH-208ENST00000641023 GOLGA8CPA6NN73 597 aa17.2■□□□□ 0.34
PHGDH-208ENST00000641023 PRAMEF1O95521 474 aa17.2■□□□□ 0.34
PHGDH-208ENST00000641023 ESR1P03372 595 aa17.2■□□□□ 0.34
PHGDH-208ENST00000641023 CHRNGP07510 517 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms