RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 HLCSP50747 726 aa13.74□□□□□ -0.21
SCARB2-227ENST00000640957 RAB10P61026 200 aa13.74□□□□□ -0.21
SCARB2-227ENST00000640957 NRG1Q02297 640 aaPredicted RBP13.74□□□□□ -0.21
SCARB2-227ENST00000640957 LIPEQ05469 1076 aa13.74□□□□□ -0.21
SCARB2-227ENST00000640957 DPY19L1Q2PZI1 675 aa13.74□□□□□ -0.21
SCARB2-227ENST00000640957 COLEC12Q5KU26 742 aa13.74□□□□□ -0.21
SCARB2-227ENST00000640957 CCDC103Q8IW40 242 aa13.74□□□□□ -0.21
SCARB2-227ENST00000640957 TRPC4APQ8TEL6 797 aa13.74□□□□□ -0.21
SCARB2-227ENST00000640957 IL22Q9GZX6 179 aa13.74□□□□□ -0.21
SCARB2-227ENST00000640957 GREB1LQ9C091 1923 aaPredicted RBP13.73□□□□□ -0.21
SCARB2-227ENST00000640957 DFFAO00273 331 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 PIP5K1BO14986 540 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 MDM4O15151 490 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 SSX4O60224 188 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 RASAL1O95294 804 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 HGFP14210 728 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 MTPNP58546 118 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 TMEM132DQ14C87 1099 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 PAGE3Q5JUK9 113 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 NOL9Q5SY16 702 aaKnown RBP13.73□□□□□ -0.21
SCARB2-227ENST00000640957 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.73□□□□□ -0.21
SCARB2-227ENST00000640957 GPR158Q5T848 1215 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 ZNF773Q6PK81 442 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 ANKRD13BQ86YJ7 626 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 REM2Q8IYK8 340 aaPredicted RBP13.73□□□□□ -0.21
SCARB2-227ENST00000640957 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.73□□□□□ -0.21
SCARB2-227ENST00000640957 TRPV3Q8NET8 790 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 OR7A2PQ8NGA2 310 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 C18orf25Q96B23 403 aaPredicted RBP13.73□□□□□ -0.21
SCARB2-227ENST00000640957 NRBF2Q96F24 287 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 CEP295NLQ96MC4 621 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 DACH2Q96NX9 599 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 OLFM1Q99784 485 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 MROQ9BYG7 248 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 C6orf62Q9GZU0 229 aaPredicted RBP13.73□□□□□ -0.21
SCARB2-227ENST00000640957 TOR3AQ9H497 397 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 HMG20AQ9NP66 347 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 UTP6Q9NYH9 597 aaKnown RBP13.73□□□□□ -0.21
SCARB2-227ENST00000640957 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.73□□□□□ -0.21
SCARB2-227ENST00000640957 TBC1D14Q9P2M4 693 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 ERVK-11Q9UQG0 969 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 NDUFAF1Q9Y375 327 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 SYCE1LA8MT33 242 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 SNPHO15079 494 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 HTR1AP08908 422 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 MLNP12872 115 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 GFAPP14136 432 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 S100A1P23297 94 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 OR4D2P58180 307 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 ADIGQ0VDE8 80 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 TRIM32Q13049 653 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 HERC3Q15034 1050 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 RSBN1Q5VWQ0 802 aaPredicted RBP13.73□□□□□ -0.21
SCARB2-227ENST00000640957 PPP2R2DQ66LE6 453 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 UGT3A1Q6NUS8 523 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 LCLAT1Q6UWP7 414 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 MIER2Q8N344 545 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 FAM83FQ8NEG4 500 aaPredicted RBP13.73□□□□□ -0.21
SCARB2-227ENST00000640957 SLC7A14Q8TBB6 771 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 FRS2Q8WU20 508 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 EDEM1Q92611 657 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 TMBIM1Q969X1 311 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 DOK1Q99704 481 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 TBCDQ9BTW9 1192 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 MID1IP1Q9NPA3 183 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 TUBA8Q9NY65 449 aaPredicted RBP13.73□□□□□ -0.21
SCARB2-227ENST00000640957 PGAP2Q9UHJ9 254 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 UGT2A1Q9Y4X1 527 aa13.73□□□□□ -0.21
SCARB2-227ENST00000640957 GNGT2O14610 69 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 PIGRP01833 764 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 AKAP5P24588 427 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 ZNF846Q147U1 533 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 CTU2Q2VPK5 515 aaKnown RBP13.72□□□□□ -0.21
SCARB2-227ENST00000640957 SLC10A6Q3KNW5 377 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 ADPRMQ3LIE5 342 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 ZPBP2Q6X784 338 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 MFSD2AQ8NA29 543 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 SLC2A14Q8TDB8 520 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 GPR22Q99680 433 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 SCUBE2Q9NQ36 999 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 GDAP2Q9NXN4 497 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 SUN2Q9UH99 717 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 CPA4Q9UI42 421 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 SLC30A1Q9Y6M5 507 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 BRWD3Q6RI45 1802 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 CNTN5O94779 1100 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 HSPA1AP0DMV8 641 aaKnown RBP13.72□□□□□ -0.21
SCARB2-227ENST00000640957 HSPA1BP0DMV9 641 aaKnown RBP13.72□□□□□ -0.21
SCARB2-227ENST00000640957 SIM2Q14190 667 aaPredicted RBP13.72□□□□□ -0.21
SCARB2-227ENST00000640957 PTPRCAPQ14761 206 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 TMTC4Q5T4D3 741 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 BTBD8Q5XKL5 378 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 SPESP1Q6UW49 350 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 RBM23Q86U06 439 aaKnown RBP13.72□□□□□ -0.21
SCARB2-227ENST00000640957 ERO1BQ86YB8 467 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 MTMR14Q8NCE2 650 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 RAB2BQ8WUD1 216 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 BIRC7Q96CA5 298 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 LRRC58Q96CX6 371 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 RHOJQ9H4E5 214 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms