RNA–Protein interactions for RNA: ENST00000640393.1

RTTN-217, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 1,357 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-217ENST00000640393 LRIF1Q5T3J3 769 aa5.56□□□□□ -1.52
RTTN-217ENST00000640393 PLEKHA7Q6IQ23 1121 aa5.56□□□□□ -1.52
RTTN-217ENST00000640393 KCTD18Q6PI47 426 aaPredicted RBP5.56□□□□□ -1.52
RTTN-217ENST00000640393 NCEH1Q6PIU2 408 aa5.56□□□□□ -1.52
RTTN-217ENST00000640393 KRBA2Q6ZNG9 492 aa5.56□□□□□ -1.52
RTTN-217ENST00000640393 C16orf82Q7Z2V1 217 aa5.56□□□□□ -1.52
RTTN-217ENST00000640393 WDTC1Q8N5D0 677 aa5.56□□□□□ -1.52
RTTN-217ENST00000640393 OR2AK2Q8NG84 335 aa5.56□□□□□ -1.52
RTTN-217ENST00000640393 NEK9Q8TD19 979 aa5.56□□□□□ -1.52
RTTN-217ENST00000640393 ARHGEF26Q96DR7 871 aa5.56□□□□□ -1.52
RTTN-217ENST00000640393 PCYT2Q99447 389 aa5.56□□□□□ -1.52
RTTN-217ENST00000640393 MTERF1Q99551 399 aaKnown RBP5.56□□□□□ -1.52
RTTN-217ENST00000640393 C1QTNF4Q9BXJ3 329 aa5.56□□□□□ -1.52
RTTN-217ENST00000640393 SLCO5A1Q9H2Y9 848 aa5.56□□□□□ -1.52
RTTN-217ENST00000640393 LRRC4Q9HBW1 653 aa5.56□□□□□ -1.52
RTTN-217ENST00000640393 BLOC1S4Q9NUP1 217 aa5.56□□□□□ -1.52
RTTN-217ENST00000640393 HCFC1R1Q9NWW0 138 aa5.56□□□□□ -1.52
RTTN-217ENST00000640393 PDS5AQ29RF7 1337 aaKnown RBP5.56□□□□□ -1.52
RTTN-217ENST00000640393 SAA2-SAA4A0A096LPE2 208 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 A0A0G2JPF8 293 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 PLSCR5A0PG75 271 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 HNRNPCL3B7ZW38 293 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 PTGES3LE9PB15 166 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 IKBKBO14920 756 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 MID1O15344 667 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 ZBED4O75132 1171 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 NDUFS3O75489 264 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 PMS2P2O95744 297 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 CLTBP09497 229 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 HNRNPCL4P0DMR1 293 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 RXRGP48443 463 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 HNRNPH2P55795 449 aaKnown RBP5.55□□□□□ -1.52
RTTN-217ENST00000640393 PDE1BQ01064 536 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 EEF1A2Q05639 463 aaKnown RBP5.55□□□□□ -1.52
RTTN-217ENST00000640393 FOXM1Q08050 763 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 NIPAL4Q0D2K0 466 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 KIF5AQ12840 1032 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 GRIK2Q13002 908 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 KEAP1Q14145 624 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 OASLQ15646 514 aaKnown RBP5.55□□□□□ -1.52
RTTN-217ENST00000640393 KIF19Q2TAC6 998 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.55□□□□□ -1.52
RTTN-217ENST00000640393 DPPA4Q7L190 304 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 TTC39CQ8N584 583 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 OR8K5Q8NH50 307 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 DUSP19Q8WTR2 217 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 APBB2Q92870 758 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 C1orf74Q96LT6 269 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 MEIS3Q99687 375 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 SDF4Q9BRK5 362 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 MUC13Q9H3R2 512 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 SH2D4AQ9H788 454 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 COPG2Q9UBF2 871 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 LOXL2Q9Y4K0 774 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 LAS1LQ9Y4W2 734 aaKnown RBP5.55□□□□□ -1.52
RTTN-217ENST00000640393 HNRNPCL2B2RXH8 293 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 DOK2O60496 412 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 JRKO75564 520 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 DDX58O95786 925 aaKnown RBP5.55□□□□□ -1.52
RTTN-217ENST00000640393 LAMP2P13473 410 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 HADHAP40939 763 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 CSNK2A1P68400 391 aaPredicted RBP5.55□□□□□ -1.52
RTTN-217ENST00000640393 SNTA1Q13424 505 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 ITPRIPL1Q6GPH6 555 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 CAPRIN2Q6IMN6 1127 aaKnown RBP5.55□□□□□ -1.52
RTTN-217ENST00000640393 ZNF280DQ6N043 979 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 CRELD2Q6UXH1 353 aaPredicted RBP5.55□□□□□ -1.52
RTTN-217ENST00000640393 CLEC17AQ6ZS10 378 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 ODF3L1Q8IXM7 274 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 SRBD1Q8N5C6 995 aaKnown RBP5.55□□□□□ -1.52
RTTN-217ENST00000640393 CSNK2A3Q8NEV1 391 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 SCFD2Q8WU76 684 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 POMGNT1Q8WZA1 660 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 LMLNQ96KR4 655 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 SMC6Q96SB8 1091 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 SH3GL2Q99962 352 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 NCAPGQ9BPX3 1015 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 UBA5Q9GZZ9 404 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 GAREM1Q9H706 876 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 SMARCAL1Q9NZC9 954 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 OR14J1Q9UGF5 321 aa5.55□□□□□ -1.52
RTTN-217ENST00000640393 ATP2A1O14983 1001 aa5.54□□□□□ -1.52
RTTN-217ENST00000640393 PTP4A3O75365 173 aa5.54□□□□□ -1.52
RTTN-217ENST00000640393 GAGE7O76087 117 aa5.54□□□□□ -1.52
RTTN-217ENST00000640393 PPP1R3DO95685 299 aa5.54□□□□□ -1.52
RTTN-217ENST00000640393 GAGE12FP0CL80 117 aa5.54□□□□□ -1.52
RTTN-217ENST00000640393 GAGE12GP0CL81 117 aa5.54□□□□□ -1.52
RTTN-217ENST00000640393 GAGE12IP0CL82 117 aa5.54□□□□□ -1.52
RTTN-217ENST00000640393 FGF3P11487 239 aaPredicted RBP5.54□□□□□ -1.52
RTTN-217ENST00000640393 DDX5P17844 614 aaKnown RBP5.54□□□□□ -1.52
RTTN-217ENST00000640393 RRM1P23921 792 aa5.54□□□□□ -1.52
RTTN-217ENST00000640393 NLRP5P59047 1200 aa5.54□□□□□ -1.52
RTTN-217ENST00000640393 BRWD1-AS2P59051 145 aa5.54□□□□□ -1.52
RTTN-217ENST00000640393 GAGE1Q13065 139 aa5.54□□□□□ -1.52
RTTN-217ENST00000640393 GAGE4Q13068 117 aa5.54□□□□□ -1.52
RTTN-217ENST00000640393 KRT24Q2M2I5 525 aa5.54□□□□□ -1.52
RTTN-217ENST00000640393 CCDC96Q2M329 555 aa5.54□□□□□ -1.52
RTTN-217ENST00000640393 DLK2Q6UY11 383 aa5.54□□□□□ -1.52
RTTN-217ENST00000640393 CCNI2Q6ZMN8 369 aaPredicted RBP5.54□□□□□ -1.52
RTTN-217ENST00000640393 SDCCAG8Q86SQ7 713 aaPredicted RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms