RNA–Protein interactions for RNA: ENST00000637100.1

CLN3-255, Transcript of CLN3, battenin, humanhuman

TSL 5 BASIC

Gene CLN3, Length 1,284 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-255ENST00000637100 MYL5Q02045 173 aa16.37■□□□□ 0.21
CLN3-255ENST00000637100 PYCR3Q53H96 274 aa16.37■□□□□ 0.21
CLN3-255ENST00000637100 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.37■□□□□ 0.21
CLN3-255ENST00000637100 ALG1LQ6GMV1 187 aa16.37■□□□□ 0.21
CLN3-255ENST00000637100 CLEC18BQ6UXF7 455 aa16.37■□□□□ 0.21
CLN3-255ENST00000637100 ARHGAP22Q7Z5H3 698 aa16.37■□□□□ 0.21
CLN3-255ENST00000637100 TEX26Q8N6G2 289 aa16.37■□□□□ 0.21
CLN3-255ENST00000637100 CLEC18CQ8NCF0 446 aa16.37■□□□□ 0.21
CLN3-255ENST00000637100 COX14Q96I36 57 aa16.37■□□□□ 0.21
CLN3-255ENST00000637100 TRIM4Q9C037 500 aa16.37■□□□□ 0.21
CLN3-255ENST00000637100 ETNK2Q9NVF9 386 aa16.37■□□□□ 0.21
CLN3-255ENST00000637100 MOSPD1Q9UJG1 213 aa16.37■□□□□ 0.21
CLN3-255ENST00000637100 PILRAQ9UKJ1 303 aa16.37■□□□□ 0.21
CLN3-255ENST00000637100 COL12A1Q99715 3063 aa16.37■□□□□ 0.21
CLN3-255ENST00000637100 IL1R2P27930 398 aa16.36■□□□□ 0.21
CLN3-255ENST00000637100 LRP8Q14114 963 aa16.36■□□□□ 0.21
CLN3-255ENST00000637100 BOLA3Q53S33 107 aa16.36■□□□□ 0.21
CLN3-255ENST00000637100 PPP6R3Q5H9R7 873 aaPredicted RBP16.36■□□□□ 0.21
CLN3-255ENST00000637100 COLEC12Q5KU26 742 aa16.36■□□□□ 0.21
CLN3-255ENST00000637100 BORAQ6PGQ7 559 aa16.36■□□□□ 0.21
CLN3-255ENST00000637100 SLC30A9Q6PML9 568 aa16.36■□□□□ 0.21
CLN3-255ENST00000637100 TSPAN33Q86UF1 283 aa16.36■□□□□ 0.21
CLN3-255ENST00000637100 SFRP1Q8N474 314 aa16.36■□□□□ 0.21
CLN3-255ENST00000637100 ANKRD20A12PQ8NF67 263 aa16.36■□□□□ 0.21
CLN3-255ENST00000637100 SLC45A3Q96JT2 553 aa16.36■□□□□ 0.21
CLN3-255ENST00000637100 PCMTD1Q96MG8 357 aaPredicted RBP16.36■□□□□ 0.21
CLN3-255ENST00000637100 TEFMQ96QE5 360 aaKnown RBP16.36■□□□□ 0.21
CLN3-255ENST00000637100 ABCG8Q9H221 673 aa16.36■□□□□ 0.21
CLN3-255ENST00000637100 ZWILCHQ9H900 591 aa16.36■□□□□ 0.21
CLN3-255ENST00000637100 AIPL1Q9NZN9 384 aa16.36■□□□□ 0.21
CLN3-255ENST00000637100 LIFP15018 202 aa16.35■□□□□ 0.21
CLN3-255ENST00000637100 CSTF2P33240 577 aaKnown RBP eCLIP16.35■□□□□ 0.21
CLN3-255ENST00000637100 RAB15P59190 212 aa16.35■□□□□ 0.21
CLN3-255ENST00000637100 PTSQ03393 145 aa16.35■□□□□ 0.21
CLN3-255ENST00000637100 ZNF235Q14590 738 aa16.35■□□□□ 0.21
CLN3-255ENST00000637100 IHHQ14623 411 aa16.35■□□□□ 0.21
CLN3-255ENST00000637100 PTPRRQ15256 657 aa16.35■□□□□ 0.21
CLN3-255ENST00000637100 CRTC2Q53ET0 693 aaPredicted RBP16.35■□□□□ 0.21
CLN3-255ENST00000637100 NKAIN2Q5VXU1 208 aa16.35■□□□□ 0.21
CLN3-255ENST00000637100 WDR74Q6RFH5 385 aaPredicted RBP16.35■□□□□ 0.21
CLN3-255ENST00000637100 LRRC49Q8IUZ0 686 aa16.35■□□□□ 0.21
CLN3-255ENST00000637100 LURAP1LQ8IV03 231 aa16.35■□□□□ 0.21
CLN3-255ENST00000637100 CCDC112Q8NEF3 446 aa16.35■□□□□ 0.21
CLN3-255ENST00000637100 ZNF564Q8TBZ8 553 aaPredicted RBP16.35■□□□□ 0.21
CLN3-255ENST00000637100 FAM71BQ8TC56 605 aa16.35■□□□□ 0.21
CLN3-255ENST00000637100 ART4Q93070 314 aa16.35■□□□□ 0.21
CLN3-255ENST00000637100 CATSPER2Q96P56 530 aa16.35■□□□□ 0.21
CLN3-255ENST00000637100 CSPG4P5Q96PW8 444 aa16.35■□□□□ 0.21
CLN3-255ENST00000637100 OR2M4Q96R27 311 aa16.35■□□□□ 0.21
CLN3-255ENST00000637100 ISCUQ9H1K1 167 aa16.35■□□□□ 0.21
CLN3-255ENST00000637100 FBXO8Q9NRD0 319 aa16.35■□□□□ 0.21
CLN3-255ENST00000637100 OCIAD1Q9NX40 245 aa16.35■□□□□ 0.21
CLN3-255ENST00000637100 TMEM9Q9P0T7 183 aa16.35■□□□□ 0.21
CLN3-255ENST00000637100 PLEKHM1Q9Y4G2 1056 aa16.35■□□□□ 0.21
CLN3-255ENST00000637100 H3BRJ5 948 aa16.34■□□□□ 0.21
CLN3-255ENST00000637100 AGRPO00253 132 aa16.34■□□□□ 0.21
CLN3-255ENST00000637100 DDX3XO00571 662 aaKnown RBP eCLIP16.34■□□□□ 0.213e-8■■■□□ 15.1
CLN3-255ENST00000637100 ATMINO43313 823 aaPredicted RBP16.34■□□□□ 0.21
CLN3-255ENST00000637100 FTLP02792 175 aaPredicted RBP16.34■□□□□ 0.21
CLN3-255ENST00000637100 PYGLP06737 847 aa16.34■□□□□ 0.21
CLN3-255ENST00000637100 PDHA1P08559 390 aa16.34■□□□□ 0.21
CLN3-255ENST00000637100 ZNF30P17039 623 aa16.34■□□□□ 0.21
CLN3-255ENST00000637100 AMPD1P23109 780 aa16.34■□□□□ 0.21
CLN3-255ENST00000637100 ACTR1BP42025 376 aa16.34■□□□□ 0.21
CLN3-255ENST00000637100 CDH6P55285 790 aa16.34■□□□□ 0.21
CLN3-255ENST00000637100 ACTR1AP61163 376 aa16.34■□□□□ 0.21
CLN3-255ENST00000637100 MC2RQ01718 297 aa16.34■□□□□ 0.21
CLN3-255ENST00000637100 TLE1Q04724 770 aa16.34■□□□□ 0.21
CLN3-255ENST00000637100 RAET1GQ6H3X3 334 aa16.34■□□□□ 0.21
CLN3-255ENST00000637100 TMCO3Q6UWJ1 677 aa16.34■□□□□ 0.21
CLN3-255ENST00000637100 RFLNAQ6ZTI6 216 aa16.34■□□□□ 0.21
CLN3-255ENST00000637100 USP45Q70EL2 814 aa16.34■□□□□ 0.21
CLN3-255ENST00000637100 ZNF571Q7Z3V5 609 aaPredicted RBP16.34■□□□□ 0.21
CLN3-255ENST00000637100 CACNA2D3Q8IZS8 1091 aa16.34■□□□□ 0.21
CLN3-255ENST00000637100 FATE1Q969F0 183 aa16.34■□□□□ 0.21
CLN3-255ENST00000637100 ANO10Q9NW15 660 aa16.34■□□□□ 0.21
CLN3-255ENST00000637100 SLC39A1Q9NY26 324 aa16.34■□□□□ 0.21
CLN3-255ENST00000637100 KCNK4Q9NYG8 393 aa16.34■□□□□ 0.21
CLN3-255ENST00000637100 TMEM184BQ9Y519 407 aaPredicted RBP16.34■□□□□ 0.21
CLN3-255ENST00000637100 LRRK2Q5S007 2527 aa16.33■□□□□ 0.2
CLN3-255ENST00000637100 A0A0J9YYE9 177 aa16.33■□□□□ 0.2
CLN3-255ENST00000637100 A6NCN8 305 aa16.33■□□□□ 0.2
CLN3-255ENST00000637100 RAD1O60671 282 aa16.33■□□□□ 0.2
CLN3-255ENST00000637100 DNAJC6O75061 913 aa16.33■□□□□ 0.2
CLN3-255ENST00000637100 TRBC1P01850 177 aa16.33■□□□□ 0.2
CLN3-255ENST00000637100 IL4RP24394 825 aa16.33■□□□□ 0.2
CLN3-255ENST00000637100 MMP13P45452 471 aa16.33■□□□□ 0.2
CLN3-255ENST00000637100 GPR1P46091 355 aa16.33■□□□□ 0.2
CLN3-255ENST00000637100 STC1P52823 247 aa16.33■□□□□ 0.2
CLN3-255ENST00000637100 POLE2P56282 527 aa16.33■□□□□ 0.2
CLN3-255ENST00000637100 KCNAB2Q13303 367 aa16.33■□□□□ 0.2
CLN3-255ENST00000637100 DCAF12Q5T6F0 453 aa16.33■□□□□ 0.2
CLN3-255ENST00000637100 ARMC12Q5T9G4 340 aa16.33■□□□□ 0.2
CLN3-255ENST00000637100 MARC1Q5VT66 337 aa16.33■□□□□ 0.2
CLN3-255ENST00000637100 E4F1Q66K89 784 aaPredicted RBP16.33■□□□□ 0.2
CLN3-255ENST00000637100 NRSN1Q8IZ57 195 aa16.33■□□□□ 0.2
CLN3-255ENST00000637100 BBS5Q8N3I7 341 aa16.33■□□□□ 0.2
CLN3-255ENST00000637100 IL22RA1Q8N6P7 574 aa16.33■□□□□ 0.2
CLN3-255ENST00000637100 NIPA2Q8N8Q9 360 aa16.33■□□□□ 0.2
CLN3-255ENST00000637100 SLC37A2Q8TED4 501 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms