RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 AZIN1O14977 448 aa12.09□□□□□ -0.47
CLN8-212ENST00000637083 STX7O15400 261 aaKnown RBP12.09□□□□□ -0.47
CLN8-212ENST00000637083 SORBS2O94875 1100 aaKnown RBP12.09□□□□□ -0.47
CLN8-212ENST00000637083 ABLIM3O94929 683 aa12.09□□□□□ -0.47
CLN8-212ENST00000637083 PIRTP0C851 137 aa12.09□□□□□ -0.47
CLN8-212ENST00000637083 HMGA1P17096 107 aaKnown RBP12.09□□□□□ -0.47
CLN8-212ENST00000637083 CLCN4P51793 760 aa12.09□□□□□ -0.47
CLN8-212ENST00000637083 THOP1P52888 689 aa12.09□□□□□ -0.47
CLN8-212ENST00000637083 AGKQ53H12 422 aa12.09□□□□□ -0.47
CLN8-212ENST00000637083 RNF219Q5W0B1 726 aaPredicted RBP12.09□□□□□ -0.47
CLN8-212ENST00000637083 ANKS6Q68DC2 871 aa12.09□□□□□ -0.47
CLN8-212ENST00000637083 LARP4Q71RC2 724 aaKnown RBP eCLIP12.09□□□□□ -0.47
CLN8-212ENST00000637083 STK40Q8N2I9 435 aa12.09□□□□□ -0.47
CLN8-212ENST00000637083 FBXO39Q8N4B4 442 aa12.09□□□□□ -0.47
CLN8-212ENST00000637083 EFCAB3Q8N7B9 438 aa12.09□□□□□ -0.47
CLN8-212ENST00000637083 LPCAT1Q8NF37 534 aa12.09□□□□□ -0.47
CLN8-212ENST00000637083 BCL7CQ8WUZ0 217 aaPredicted RBP12.09□□□□□ -0.47
CLN8-212ENST00000637083 ASB9Q96DX5 294 aa12.09□□□□□ -0.47
CLN8-212ENST00000637083 PRICKLE1Q96MT3 831 aaPredicted RBP12.09□□□□□ -0.47
CLN8-212ENST00000637083 ATOH8Q96SQ7 321 aa12.09□□□□□ -0.47
CLN8-212ENST00000637083 DLGAP2Q9P1A6 1054 aa12.09□□□□□ -0.47
CLN8-212ENST00000637083 SUCOQ9UBS9 1254 aaKnown RBP12.09□□□□□ -0.47
CLN8-212ENST00000637083 STOML2Q9UJZ1 356 aa12.09□□□□□ -0.47
CLN8-212ENST00000637083 ADAMTS6Q9UKP5 1117 aa12.09□□□□□ -0.47
CLN8-212ENST00000637083 H3BNX3 289 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 STX16-NPEPL1H3BU86 382 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 STX16O14662 325 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 CRCPO75575 148 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 GJB3O75712 270 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 SOD2P04179 222 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 PKMP14618 531 aaKnown RBP12.08□□□□□ -0.48
CLN8-212ENST00000637083 UQCRBP14927 111 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 FMO4P31512 558 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 TRAP1Q12931 704 aaKnown RBP12.08□□□□□ -0.48
CLN8-212ENST00000637083 PTPRCAPQ14761 206 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 PFKFB4Q16877 469 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 OGFRL1Q5TC84 451 aaPredicted RBP12.08□□□□□ -0.48
CLN8-212ENST00000637083 GK5Q6ZS86 529 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 RNF168Q8IYW5 571 aaPredicted RBP12.08□□□□□ -0.48
CLN8-212ENST00000637083 SHKBP1Q8TBC3 707 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 EXT2Q93063 718 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.08□□□□□ -0.48
CLN8-212ENST00000637083 ROPN1LQ96C74 230 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 NPAS2Q99743 824 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 KLF16Q9BXK1 252 aaPredicted RBP12.08□□□□□ -0.48
CLN8-212ENST00000637083 MID1IP1Q9NPA3 183 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 ADA2Q9NZK5 511 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 MAFFQ9ULX9 164 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 SPO11Q9Y5K1 396 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 SUPT3HB4E1H0 165 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 H0Y626 953 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 H7C0S8 307 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 UBXN8O00124 270 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 UBFD1O14562 309 aaKnown RBP12.08□□□□□ -0.48
CLN8-212ENST00000637083 GIPC1O14908 333 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 ADAM12O43184 909 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 NRP2O60462 931 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 FKTNO75072 461 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 SUPT3HO75486 399 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 CHEK2O96017 543 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 KLKB1P03952 638 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 XRCC1P18887 633 aaPredicted RBP12.08□□□□□ -0.48
CLN8-212ENST00000637083 RGRP47804 291 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 KCNC1P48547 511 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 TIAL1Q01085 375 aaKnown RBP eCLIP12.08□□□□□ -0.48
CLN8-212ENST00000637083 LCP2Q13094 533 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 CEACAM7Q14002 265 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 LRP8Q14114 963 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 TRIM25Q14258 630 aaKnown RBP12.08□□□□□ -0.48
CLN8-212ENST00000637083 GRAMD1BQ3KR37 738 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 REP15Q6BDI9 236 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 PRMT9Q6P2P2 845 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 HJURPQ8NCD3 748 aaPredicted RBP12.08□□□□□ -0.48
CLN8-212ENST00000637083 BHLHE22Q8NFJ8 381 aaPredicted RBP12.08□□□□□ -0.48
CLN8-212ENST00000637083 ADCY4Q8NFM4 1077 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 MDGA1Q8NFP4 955 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 ZNF296Q8WUU4 475 aaPredicted RBP12.08□□□□□ -0.48
CLN8-212ENST00000637083 UCMAQ8WVF2 138 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 SCLYQ96I15 445 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 SPAG4Q9NPE6 437 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 POLR3BQ9NW08 1133 aaPredicted RBP12.08□□□□□ -0.48
CLN8-212ENST00000637083 CACNA2D2Q9NY47 1150 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 CCDC167Q9P0B6 97 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 TRMT6Q9UJA5 497 aaKnown RBP12.08□□□□□ -0.48
CLN8-212ENST00000637083 CROTQ9UKG9 612 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 MTF2Q9Y483 593 aaPredicted RBP12.08□□□□□ -0.48
CLN8-212ENST00000637083 DTNAQ9Y4J8 743 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 YIPF1Q9Y548 306 aa12.08□□□□□ -0.48
CLN8-212ENST00000637083 OAS3Q9Y6K5 1087 aaKnown RBP12.08□□□□□ -0.48
CLN8-212ENST00000637083 DPPA5A6NC42 116 aa12.07□□□□□ -0.48
CLN8-212ENST00000637083 MRASO14807 208 aa12.07□□□□□ -0.48
CLN8-212ENST00000637083 CLASP2O75122 1294 aaKnown RBP12.07□□□□□ -0.48
CLN8-212ENST00000637083 CDK14O94921 469 aa12.07□□□□□ -0.48
CLN8-212ENST00000637083 MLYCDO95822 493 aa12.07□□□□□ -0.48
CLN8-212ENST00000637083 C1RP00736 705 aa12.07□□□□□ -0.48
CLN8-212ENST00000637083 PRLP01236 227 aa12.07□□□□□ -0.48
CLN8-212ENST00000637083 LYNP07948 512 aa12.07□□□□□ -0.48
CLN8-212ENST00000637083 HSPA8P11142 646 aaKnown RBP12.07□□□□□ -0.48
CLN8-212ENST00000637083 RPL17P18621 184 aaKnown RBP12.07□□□□□ -0.48
CLN8-212ENST00000637083 MC4RP32245 332 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms