RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 PYCARDQ9ULZ3 195 aa8.2□□□□□ -1.1
PNKP-226ENST00000636840 APOBEC2Q9Y235 224 aaKnown RBP8.2□□□□□ -1.1
PNKP-226ENST00000636840 FNDC3AQ9Y2H6 1198 aaKnown RBP8.2□□□□□ -1.1
PNKP-226ENST00000636840 ZNF711Q9Y462 761 aa8.2□□□□□ -1.1
PNKP-226ENST00000636840 SAR1BQ9Y6B6 198 aa8.2□□□□□ -1.1
PNKP-226ENST00000636840 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.2□□□□□ -1.1
PNKP-226ENST00000636840 CSNK1G3Q9Y6M4 447 aa8.2□□□□□ -1.1
PNKP-226ENST00000636840 MYO15AQ9UKN7 3530 aa8.2□□□□□ -1.1
PNKP-226ENST00000636840 USP34Q70CQ2 3546 aa8.2□□□□□ -1.1
PNKP-226ENST00000636840 ADAMTS9Q9P2N4 1935 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 TM4SF5O14894 197 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 SCAMP1O15126 338 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 AQP9O43315 295 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 PIAS2O75928 621 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 KCNK5O95279 499 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 TUBB4AP04350 444 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 ANXA6P08133 673 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 C1SP09871 688 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 PIRTP0C851 137 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 CDK4P11802 303 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 MYCLP1P12525 358 aaPredicted RBP8.19□□□□□ -1.1
PNKP-226ENST00000636840 NME1P15531 152 aaKnown RBP8.19□□□□□ -1.1
PNKP-226ENST00000636840 LPOP22079 712 aaPredicted RBP8.19□□□□□ -1.1
PNKP-226ENST00000636840 DGKAP23743 735 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 EPHA8P29322 1005 aaPredicted RBP8.19□□□□□ -1.1
PNKP-226ENST00000636840 HADHAP40939 763 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 RPIAP49247 311 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 NOVA1P51513 510 aaKnown RBP8.19□□□□□ -1.1
PNKP-226ENST00000636840 HK3P52790 923 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 CDH17Q12864 832 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 PTPRRQ15256 657 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 TAF1AQ15573 450 aaPredicted RBP8.19□□□□□ -1.1
PNKP-226ENST00000636840 ZNF542PQ5EBM4 170 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 PRRT3Q5FWE3 981 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 PAPD7Q5XG87 772 aaKnown RBP8.19□□□□□ -1.1
PNKP-226ENST00000636840 PDPK2PQ6A1A2 396 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 CCDC137Q6PK04 289 aaKnown RBP8.19□□□□□ -1.1
PNKP-226ENST00000636840 ADAMTSL4Q6UY14 1074 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 ERMP1Q7Z2K6 904 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 LYSMD3Q7Z3D4 306 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 PIP4P1Q86T03 277 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 PHACTR4Q8IZ21 702 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 PDCD7Q8N8D1 485 aaKnown RBP8.19□□□□□ -1.1
PNKP-226ENST00000636840 PLA2G15Q8NCC3 412 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 DEFB124Q8NES8 71 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 LMX1AQ8TE12 382 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 SAP25Q8TEE9 199 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 SCAMP4Q969E2 229 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 FUBP1Q96AE4 644 aaKnown RBP8.19□□□□□ -1.1
PNKP-226ENST00000636840 HIC2Q96JB3 615 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 TTC25Q96NG3 672 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 RUNDC3BQ96NL0 473 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 PLEKHG4BQ96PX9 1271 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 RIOK2Q9BVS4 552 aaKnown RBP8.19□□□□□ -1.1
PNKP-226ENST00000636840 TEX101Q9BY14 249 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 ETNK1Q9HBU6 452 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 ARNT2Q9HBZ2 717 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 RAB6BQ9NRW1 208 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 GPR27Q9NS67 375 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 NCKIPSDQ9NZQ3 722 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 FTSJ1Q9UET6 329 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 APOBEC3BQ9UH17 382 aaKnown RBP8.19□□□□□ -1.1
PNKP-226ENST00000636840 CD84Q9UIB8 345 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 APPL1Q9UKG1 709 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 OR1A2Q9Y585 309 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 DMDP11532 3685 aa8.19□□□□□ -1.1
PNKP-226ENST00000636840 PLXNA2O75051 1894 aa8.18□□□□□ -1.1
PNKP-226ENST00000636840 USP27XA6NNY8 438 aa8.18□□□□□ -1.1
PNKP-226ENST00000636840 TPP1O14773 563 aa8.18□□□□□ -1.1
PNKP-226ENST00000636840 TNFSF14O43557 240 aa8.18□□□□□ -1.1
PNKP-226ENST00000636840 SLC25A14O95258 325 aaPredicted RBP8.18□□□□□ -1.1
PNKP-226ENST00000636840 TRIM16O95361 564 aa8.18□□□□□ -1.1
PNKP-226ENST00000636840 METTL18O95568 372 aa8.18□□□□□ -1.1
PNKP-226ENST00000636840 AP2A1O95782 977 aa8.18□□□□□ -1.1
PNKP-226ENST00000636840 KRT14P02533 472 aa8.18□□□□□ -1.1
PNKP-226ENST00000636840 SLC4A1P02730 911 aa8.18□□□□□ -1.1
PNKP-226ENST00000636840 APRTP07741 180 aa8.18□□□□□ -1.1
PNKP-226ENST00000636840 ATXN1LP0C7T5 689 aaKnown RBP8.18□□□□□ -1.1
PNKP-226ENST00000636840 RPL22P35268 128 aaKnown RBP8.18□□□□□ -1.1
PNKP-226ENST00000636840 ADRA1AP35348 466 aa8.18□□□□□ -1.1
PNKP-226ENST00000636840 COILP38432 576 aaPredicted RBP8.18□□□□□ -1.1
PNKP-226ENST00000636840 CHRNA4P43681 627 aa8.18□□□□□ -1.1
PNKP-226ENST00000636840 KCNJ1P48048 391 aa8.18□□□□□ -1.1
PNKP-226ENST00000636840 GDF10P55107 478 aa8.18□□□□□ -1.1
PNKP-226ENST00000636840 DCDC1P59894 354 aa8.18□□□□□ -1.1
PNKP-226ENST00000636840 ETF1P62495 437 aaKnown RBP8.18□□□□□ -1.1
PNKP-226ENST00000636840 BASP1P80723 227 aaKnown RBP8.18□□□□□ -1.1
PNKP-226ENST00000636840 DAB2P98082 770 aa8.18□□□□□ -1.1
PNKP-226ENST00000636840 CDK16Q00536 496 aa8.18□□□□□ -1.1
PNKP-226ENST00000636840 IL9RQ01113 521 aa8.18□□□□□ -1.1
PNKP-226ENST00000636840 EIF2B5Q13144 721 aaKnown RBP8.18□□□□□ -1.1
PNKP-226ENST00000636840 ITGA9Q13797 1035 aa8.18□□□□□ -1.1
PNKP-226ENST00000636840 SIX1Q15475 284 aaPredicted RBP8.18□□□□□ -1.1
PNKP-226ENST00000636840 CDKN3Q16667 212 aa8.18□□□□□ -1.1
PNKP-226ENST00000636840 SKIDA1Q1XH10 827 aa8.18□□□□□ -1.1
PNKP-226ENST00000636840 PPM1JQ5JR12 505 aa8.18□□□□□ -1.1
PNKP-226ENST00000636840 FAM182AQ5T1J6 154 aa8.18□□□□□ -1.1
PNKP-226ENST00000636840 LVRNQ6Q4G3 990 aa8.18□□□□□ -1.1
PNKP-226ENST00000636840 HEATR4Q86WZ0 1026 aa8.18□□□□□ -1.1
PNKP-226ENST00000636840 GATAD2AQ86YP4 633 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms