RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-238ENST00000635997 HCFC2Q9Y5Z7 792 aa14.31□□□□□ -0.12
NEDD4L-238ENST00000635997 NUP188Q5SRE5 1749 aa14.31□□□□□ -0.12
NEDD4L-238ENST00000635997 PKD1L3Q7Z443 1732 aa14.31□□□□□ -0.12
NEDD4L-238ENST00000635997 BRWD3Q6RI45 1802 aa14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 CASP8AP2Q9UKL3 1982 aa14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 ZDBF2Q9HCK1 2354 aa14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 ANKDD1BA6NHY2 528 aa14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 SAC3D1A6NKF1 404 aa14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 FAM170BA6NMN3 283 aa14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 PSMD12O00232 456 aaPredicted RBP14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 PSMC3P17980 439 aa14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 MAPK1P28482 360 aa14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 AIF1P55008 147 aa14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 PRKCQQ04759 706 aa14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 CCDC81Q6ZN84 652 aa14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 ATXN2LQ8WWM7 1075 aaKnown RBP14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 CXorf40BQ96DE9 158 aa14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 AGAP2Q99490 1192 aa14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 PNPOQ9NVS9 261 aa14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 FZD10Q9ULW2 581 aa14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 NUP98P52948 1817 aa14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 TUBGCP6Q96RT7 1819 aa14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 OR51F1A6NGY5 319 aa14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 ULK1O75385 1050 aa14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 LRATO95237 230 aa14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 HOXB2P14652 356 aa14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 ITPKAP23677 461 aa14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 MSX2P35548 267 aaPredicted RBP14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 DMWDQ09019 674 aa14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 PRKG2Q13237 762 aa14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 GRM3Q14832 879 aa14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 PATL1Q86TB9 770 aaKnown RBP14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 NXNL1Q96CM4 212 aa14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 ADAMTS10Q9H324 1103 aa14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 RHOJQ9H4E5 214 aa14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 RCOR3Q9P2K3 495 aaPredicted RBP14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 GRIN2DO15399 1336 aa14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 NCOR1O75376 2440 aa14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 BCLAF3A2AJT9 711 aaKnown RBP14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 AP2A1O95782 977 aa14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 ASGR2P07307 311 aa14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 HGFP14210 728 aa14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 RNASEH2BQ5TBB1 312 aaKnown RBP14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 LRRC8BQ6P9F7 803 aa14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 CENPLQ8N0S6 344 aaPredicted RBP14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 CNBD2Q96M20 576 aa14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 GNPTGQ9UJJ9 305 aa14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 CROTQ9UKG9 612 aa14.3□□□□□ -0.12
NEDD4L-238ENST00000635997 MATN3O15232 486 aa14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 ALBP02768 609 aa14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 KCNE1P15382 129 aa14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 ACVRL1P37023 503 aa14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 CENPAP49450 140 aa14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 SLC1A5Q15758 541 aa14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 CCDC92Q53HC0 331 aaPredicted RBP14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 PARGQ86W56 976 aa14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 DNAJB14Q8TBM8 379 aa14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 EZH1Q92800 747 aaPredicted RBP14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 AP2M1Q96CW1 435 aa14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 KLHL32Q96NJ5 620 aa14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 QKIQ96PU8 341 aaKnown RBP eCLIP14.29□□□□□ -0.123e-9■■■■■ 36.1
NEDD4L-238ENST00000635997 GPR21Q99679 349 aa14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 XYLT2Q9H1B5 865 aa14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 INVSQ9Y283 1065 aa14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 MFHAS1Q9Y4C4 1052 aa14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 KELP23276 732 aa14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 S100A3P33764 101 aa14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 HNRNPDQ14103 355 aaKnown RBP14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 IYDQ6PHW0 289 aa14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 MREGQ8N565 214 aa14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 SMARCD2Q92925 531 aa14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 LRCH3Q96II8 777 aa14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 CCDC134Q9H6E4 229 aa14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 ANKRD6Q9Y2G4 727 aa14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 TCRBV7S3A2A0A539 114 aa14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 RBM47A0AV96 593 aaKnown RBP14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 LINC00032P0C843 101 aa14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 DDX6P26196 483 aaKnown RBP eCLIP14.29□□□□□ -0.122e-8■■■■■ 192.2
NEDD4L-238ENST00000635997 ARRB1P49407 418 aaPredicted RBP14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 CACNA2D1P54289 1103 aa14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 GPR17Q13304 367 aa14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 WDR45BQ5MNZ6 344 aa14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 DEFB119Q8N690 84 aa14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 BBS4Q96RK4 519 aa14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 IRF2BPLQ9H1B7 796 aa14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 SLC25A51Q9H1U9 297 aa14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 KLHL3Q9UH77 587 aa14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 FKBPLQ9UIM3 349 aa14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 TBX21Q9UL17 535 aa14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 LAMA4Q16363 1823 aa14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 CCDC154A6NI56 674 aa14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 CACNB4O00305 520 aaPredicted RBP14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 BEST1O76090 585 aa14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 PRAMEF1O95521 474 aa14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 PKMP14618 531 aaKnown RBP14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 CDH2P19022 906 aaPredicted RBP14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 CCNCP24863 283 aa14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 NOVP48745 357 aa14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 SNAP47Q5SQN1 464 aa14.29□□□□□ -0.12
NEDD4L-238ENST00000635997 DCAF12L1Q5VU92 463 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms