RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 RAD23BP54727 409 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 GCNT1Q02742 428 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 INCA1Q0VD86 236 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 CST6Q15828 149 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 PKDCCQ504Y2 493 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 AADACL2Q6P093 401 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 TMEM270Q6UE05 265 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.91□□□□□ -1.62
LINC00550-201ENST00000629293 ADIPOR2Q86V24 386 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 CIR1Q86X95 450 aaPredicted RBP4.91□□□□□ -1.62
LINC00550-201ENST00000629293 CCDC103Q8IW40 242 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 UBL4BQ8N7F7 174 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 ANKRD52Q8NB46 1076 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 CLEC4CQ8WTT0 213 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 JPH3Q8WXH2 748 aaPredicted RBP4.91□□□□□ -1.62
LINC00550-201ENST00000629293 NXPE2Q96DL1 559 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 FMO2Q99518 471 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 ARPC5LQ9BPX5 153 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 SYNDIG1Q9H7V2 258 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 LRRC4CQ9HCJ2 640 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 ACP6Q9NPH0 428 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 ANLNQ9NQW6 1124 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 RAB20Q9NX57 234 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 ZNF180Q9UJW8 692 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 PCDH15Q96QU1 1955 aa4.9□□□□□ -1.62
LINC00550-201ENST00000629293 UNC13CQ8NB66 2214 aa4.9□□□□□ -1.62
LINC00550-201ENST00000629293 M0QYV0 167 aa4.9□□□□□ -1.62
LINC00550-201ENST00000629293 SLC31A1O15431 190 aa4.9□□□□□ -1.62
LINC00550-201ENST00000629293 TLX3O43711 291 aaPredicted RBP4.9□□□□□ -1.62
LINC00550-201ENST00000629293 PCDHGA12O60330 932 aa4.9□□□□□ -1.62
LINC00550-201ENST00000629293 MPOP05164 745 aa4.9□□□□□ -1.62
LINC00550-201ENST00000629293 MX2P20592 715 aa4.9□□□□□ -1.62
LINC00550-201ENST00000629293 CD38P28907 300 aa4.9□□□□□ -1.62
LINC00550-201ENST00000629293 CTSKP43235 329 aa4.9□□□□□ -1.62
LINC00550-201ENST00000629293 ZNF132P52740 706 aa4.9□□□□□ -1.62
LINC00550-201ENST00000629293 GUCY1A3Q02108 690 aa4.9□□□□□ -1.62
LINC00550-201ENST00000629293 ODF1Q14990 250 aa4.9□□□□□ -1.62
LINC00550-201ENST00000629293 CLEC16AQ2KHT3 1053 aa4.9□□□□□ -1.62
LINC00550-201ENST00000629293 ZNF542PQ5EBM4 170 aa4.9□□□□□ -1.62
LINC00550-201ENST00000629293 EXOSC6Q5RKV6 272 aaKnown RBP4.9□□□□□ -1.62
LINC00550-201ENST00000629293 ARHGAP40Q5TG30 622 aa4.9□□□□□ -1.62
LINC00550-201ENST00000629293 KIAA0895LQ68EN5 471 aa4.9□□□□□ -1.62
LINC00550-201ENST00000629293 TTC19Q6DKK2 380 aaPredicted RBP4.9□□□□□ -1.62
LINC00550-201ENST00000629293 ENOSF1Q7L5Y1 443 aa4.9□□□□□ -1.62
LINC00550-201ENST00000629293 GLRX5Q86SX6 157 aa4.9□□□□□ -1.62
LINC00550-201ENST00000629293 CHSY1Q86X52 802 aa4.9□□□□□ -1.62
LINC00550-201ENST00000629293 CPNE8Q86YQ8 564 aa4.9□□□□□ -1.62
LINC00550-201ENST00000629293 STK40Q8N2I9 435 aa4.9□□□□□ -1.62
LINC00550-201ENST00000629293 ZNF564Q8TBZ8 553 aaPredicted RBP4.9□□□□□ -1.62
LINC00550-201ENST00000629293 SLCO2A1Q92959 643 aa4.9□□□□□ -1.62
LINC00550-201ENST00000629293 NT5C1BQ96P26 610 aa4.9□□□□□ -1.62
LINC00550-201ENST00000629293 TTC1Q99614 292 aa4.9□□□□□ -1.62
LINC00550-201ENST00000629293 NUP85Q9BW27 656 aa4.9□□□□□ -1.62
LINC00550-201ENST00000629293 FAM107BQ9H098 131 aa4.9□□□□□ -1.62
LINC00550-201ENST00000629293 DPH5Q9H2P9 285 aa4.9□□□□□ -1.62
LINC00550-201ENST00000629293 PNPLA8Q9NP80 782 aa4.9□□□□□ -1.62
LINC00550-201ENST00000629293 SUN2Q9UH99 717 aa4.9□□□□□ -1.62
LINC00550-201ENST00000629293 TMEFF2Q9UIK5 374 aaPredicted RBP4.9□□□□□ -1.62
LINC00550-201ENST00000629293 PCDHGA9Q9Y5G4 932 aaKnown RBP4.9□□□□□ -1.62
LINC00550-201ENST00000629293 PCDHGA8Q9Y5G5 932 aa4.9□□□□□ -1.62
LINC00550-201ENST00000629293 PCDHGA7Q9Y5G6 932 aa4.9□□□□□ -1.62
LINC00550-201ENST00000629293 PCDHGA6Q9Y5G7 932 aa4.9□□□□□ -1.62
LINC00550-201ENST00000629293 PCDHGA3Q9Y5H0 932 aa4.9□□□□□ -1.62
LINC00550-201ENST00000629293 MYO9AB2RTY4 2548 aa4.9□□□□□ -1.62
LINC00550-201ENST00000629293 EIF4EBP3O60516 100 aaPredicted RBP4.9□□□□□ -1.63
LINC00550-201ENST00000629293 WNT1P04628 370 aa4.9□□□□□ -1.63
LINC00550-201ENST00000629293 IGHV4-34P06331 123 aa4.9□□□□□ -1.63
LINC00550-201ENST00000629293 ZNF883P0CG24 379 aa4.9□□□□□ -1.63
LINC00550-201ENST00000629293 PYGMP11217 842 aa4.9□□□□□ -1.63
LINC00550-201ENST00000629293 UNGP13051 313 aaPredicted RBP4.9□□□□□ -1.63
LINC00550-201ENST00000629293 FNTAP49354 379 aa4.9□□□□□ -1.63
LINC00550-201ENST00000629293 METAP1P53582 386 aa4.9□□□□□ -1.63
LINC00550-201ENST00000629293 EIF3BP55884 814 aaKnown RBP4.9□□□□□ -1.63
LINC00550-201ENST00000629293 BST2Q10589 180 aaKnown RBP4.9□□□□□ -1.63
LINC00550-201ENST00000629293 E2F5Q15329 346 aa4.9□□□□□ -1.63
LINC00550-201ENST00000629293 ACAD10Q6JQN1 1059 aa4.9□□□□□ -1.63
LINC00550-201ENST00000629293 SLC13A5Q86YT5 568 aaPredicted RBP4.9□□□□□ -1.63
LINC00550-201ENST00000629293 ARFGAP2Q8N6H7 521 aa4.9□□□□□ -1.63
LINC00550-201ENST00000629293 C3orf20Q8ND61 904 aa4.9□□□□□ -1.63
LINC00550-201ENST00000629293 WFIKKN2Q8TEU8 576 aa4.9□□□□□ -1.63
LINC00550-201ENST00000629293 ZNF653Q96CK0 615 aa4.9□□□□□ -1.63
LINC00550-201ENST00000629293 C18orf8Q96DM3 657 aa4.9□□□□□ -1.63
LINC00550-201ENST00000629293 RUNDC3BQ96NL0 473 aa4.9□□□□□ -1.63
LINC00550-201ENST00000629293 CALN1Q9BXU9 219 aa4.9□□□□□ -1.63
LINC00550-201ENST00000629293 FAM129AQ9BZQ8 928 aa4.9□□□□□ -1.63
LINC00550-201ENST00000629293 EBF2Q9HAK2 575 aa4.9□□□□□ -1.63
LINC00550-201ENST00000629293 SGK2Q9HBY8 427 aa4.9□□□□□ -1.63
LINC00550-201ENST00000629293 OLA1Q9NTK5 396 aaKnown RBP4.9□□□□□ -1.63
LINC00550-201ENST00000629293 XPO7Q9UIA9 1087 aaKnown RBP4.9□□□□□ -1.63
LINC00550-201ENST00000629293 PCDHB4Q9Y5E5 795 aa4.9□□□□□ -1.63
LINC00550-201ENST00000629293 ABCA12Q86UK0 2595 aa4.9□□□□□ -1.63
LINC00550-201ENST00000629293 A0A1W2PPC4 97 aa4.9□□□□□ -1.63
LINC00550-201ENST00000629293 TCRBV7S2A1N4TA0A589 114 aa4.9□□□□□ -1.63
LINC00550-201ENST00000629293 GOLGA6L10A6NI86 522 aa4.9□□□□□ -1.63
LINC00550-201ENST00000629293 EBAG9O00559 213 aa4.9□□□□□ -1.63
LINC00550-201ENST00000629293 ENDOD1O94919 500 aa4.9□□□□□ -1.63
LINC00550-201ENST00000629293 NAT2P11245 290 aa4.9□□□□□ -1.63
LINC00550-201ENST00000629293 SLC6A4P31645 630 aa4.9□□□□□ -1.63
LINC00550-201ENST00000629293 NNMTP40261 264 aa4.9□□□□□ -1.63
LINC00550-201ENST00000629293 RPL21P46778 160 aaKnown RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms