RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 ERMP1Q7Z2K6 904 aa11.24□□□□□ -0.61
VARS2-213ENST00000625423 PHYKPLQ8IUZ5 450 aa11.24□□□□□ -0.61
VARS2-213ENST00000625423 SLC15A3Q8IY34 581 aa11.24□□□□□ -0.61
VARS2-213ENST00000625423 MIER2Q8N344 545 aa11.24□□□□□ -0.61
VARS2-213ENST00000625423 ANKFN1Q8N957 763 aa11.24□□□□□ -0.61
VARS2-213ENST00000625423 TUBGCP3Q96CW5 907 aa11.24□□□□□ -0.61
VARS2-213ENST00000625423 UROC1Q96N76 676 aa11.24□□□□□ -0.61
VARS2-213ENST00000625423 HAUS8Q9BT25 410 aa11.24□□□□□ -0.61
VARS2-213ENST00000625423 TRIM8Q9BZR9 551 aa11.24□□□□□ -0.61
VARS2-213ENST00000625423 HACD3Q9P035 362 aa11.24□□□□□ -0.61
VARS2-213ENST00000625423 ATXN10Q9UBB4 475 aa11.24□□□□□ -0.61
VARS2-213ENST00000625423 PCDHB8Q9UN66 801 aa11.24□□□□□ -0.61
VARS2-213ENST00000625423 MYRFQ9Y2G1 1151 aa11.24□□□□□ -0.61
VARS2-213ENST00000625423 NDUFAF1Q9Y375 327 aa11.24□□□□□ -0.61
VARS2-213ENST00000625423 FAM149AA5PLN7 773 aa11.24□□□□□ -0.61
VARS2-213ENST00000625423 H3BNH8 94 aa11.24□□□□□ -0.61
VARS2-213ENST00000625423 TNPO2O14787 897 aaKnown RBP11.24□□□□□ -0.61
VARS2-213ENST00000625423 ANGPT2O15123 496 aa11.24□□□□□ -0.61
VARS2-213ENST00000625423 TPST1O60507 370 aa11.24□□□□□ -0.61
VARS2-213ENST00000625423 CDH2P19022 906 aaPredicted RBP11.24□□□□□ -0.61
VARS2-213ENST00000625423 LPIN1Q14693 890 aa11.24□□□□□ -0.61
VARS2-213ENST00000625423 NHSL2Q5HYW2 709 aa11.24□□□□□ -0.61
VARS2-213ENST00000625423 TBCELQ5QJ74 424 aa11.24□□□□□ -0.61
VARS2-213ENST00000625423 PPP4R4Q6NUP7 873 aa11.24□□□□□ -0.61
VARS2-213ENST00000625423 BORAQ6PGQ7 559 aa11.24□□□□□ -0.61
VARS2-213ENST00000625423 ZNF280BQ86YH2 543 aa11.24□□□□□ -0.61
VARS2-213ENST00000625423 RPRD1AQ96P16 312 aaPredicted RBP11.24□□□□□ -0.61
VARS2-213ENST00000625423 PNPLA3Q9NST1 481 aa11.24□□□□□ -0.61
VARS2-213ENST00000625423 ARMC1Q9NVT9 282 aa11.24□□□□□ -0.61
VARS2-213ENST00000625423 NLRC5Q86WI3 1866 aa11.23□□□□□ -0.61
VARS2-213ENST00000625423 PTPRDP23468 1912 aa11.23□□□□□ -0.61
VARS2-213ENST00000625423 MIA3Q5JRA6 1907 aa11.23□□□□□ -0.61
VARS2-213ENST00000625423 KPNA6O60684 536 aa11.23□□□□□ -0.61
VARS2-213ENST00000625423 CLASP2O75122 1294 aaKnown RBP11.23□□□□□ -0.61
VARS2-213ENST00000625423 BMP2P12643 396 aa11.23□□□□□ -0.61
VARS2-213ENST00000625423 HGFP14210 728 aa11.23□□□□□ -0.61
VARS2-213ENST00000625423 ZNF23P17027 643 aa11.23□□□□□ -0.61
VARS2-213ENST00000625423 RPL10P27635 214 aaKnown RBP11.23□□□□□ -0.61
VARS2-213ENST00000625423 ECT2LQ008S8 904 aa11.23□□□□□ -0.61
VARS2-213ENST00000625423 PLOD1Q02809 727 aaPredicted RBP11.23□□□□□ -0.61
VARS2-213ENST00000625423 ACVR1Q04771 509 aa11.23□□□□□ -0.61
VARS2-213ENST00000625423 IL10RBQ08334 325 aa11.23□□□□□ -0.61
VARS2-213ENST00000625423 TMEM259Q4ZIN3 620 aa11.23□□□□□ -0.61
VARS2-213ENST00000625423 KANK2Q63ZY3 851 aa11.23□□□□□ -0.61
VARS2-213ENST00000625423 ATP6V0D2Q8N8Y2 350 aa11.23□□□□□ -0.61
VARS2-213ENST00000625423 B4GALNT2Q8NHY0 566 aa11.23□□□□□ -0.61
VARS2-213ENST00000625423 MYEOVQ96EZ4 313 aa11.23□□□□□ -0.61
VARS2-213ENST00000625423 RMND5BQ96G75 393 aaPredicted RBP11.23□□□□□ -0.61
VARS2-213ENST00000625423 ATOH8Q96SQ7 321 aa11.23□□□□□ -0.61
VARS2-213ENST00000625423 TCF12Q99081 682 aa11.23□□□□□ -0.61
VARS2-213ENST00000625423 HOPXQ9BPY8 73 aaPredicted RBP11.23□□□□□ -0.61
VARS2-213ENST00000625423 CCM2LQ9NUG4 571 aaPredicted RBP11.23□□□□□ -0.61
VARS2-213ENST00000625423 CMTM6Q9NX76 183 aa11.23□□□□□ -0.61
VARS2-213ENST00000625423 ABCD2Q9UBJ2 740 aa11.23□□□□□ -0.61
VARS2-213ENST00000625423 IGLV3-10A0A075B6K4 115 aa11.23□□□□□ -0.61
VARS2-213ENST00000625423 PDLIM1O00151 329 aa11.23□□□□□ -0.61
VARS2-213ENST00000625423 RPP40O75818 363 aaKnown RBP11.23□□□□□ -0.61
VARS2-213ENST00000625423 TMCC1O94876 653 aa11.23□□□□□ -0.61
VARS2-213ENST00000625423 OR1E1P30953 314 aa11.23□□□□□ -0.61
VARS2-213ENST00000625423 CDH15P55291 814 aa11.23□□□□□ -0.61
VARS2-213ENST00000625423 FKBP1BP68106 108 aa11.23□□□□□ -0.61
VARS2-213ENST00000625423 SERINC3Q13530 473 aa11.23□□□□□ -0.61
VARS2-213ENST00000625423 RPS6KA2Q15349 733 aa11.23□□□□□ -0.61
VARS2-213ENST00000625423 PABPC1LQ4VXU2 614 aaKnown RBP11.23□□□□□ -0.61
VARS2-213ENST00000625423 TTC9BQ8N6N2 239 aa11.23□□□□□ -0.61
VARS2-213ENST00000625423 FAM47BQ8NA70 645 aa11.23□□□□□ -0.61
VARS2-213ENST00000625423 OR4L1Q8NH43 312 aa11.23□□□□□ -0.61
VARS2-213ENST00000625423 EZH1Q92800 747 aaPredicted RBP11.23□□□□□ -0.61
VARS2-213ENST00000625423 BTN2A3PQ96KV6 586 aa11.23□□□□□ -0.61
VARS2-213ENST00000625423 ASB2Q96Q27 587 aa11.23□□□□□ -0.61
VARS2-213ENST00000625423 ANKRD60Q9BZ19 345 aa11.23□□□□□ -0.61
VARS2-213ENST00000625423 POLR1EQ9GZS1 481 aaKnown RBP11.23□□□□□ -0.61
VARS2-213ENST00000625423 SEMA4BQ9NPR2 832 aaPredicted RBP11.23□□□□□ -0.61
VARS2-213ENST00000625423 CATSPERZQ9NTU4 200 aa11.23□□□□□ -0.61
VARS2-213ENST00000625423 HSFX1Q9UBD0 423 aa11.23□□□□□ -0.61
VARS2-213ENST00000625423 POLG2Q9UHN1 485 aa11.23□□□□□ -0.61
VARS2-213ENST00000625423 FAM50BQ9Y247 325 aa11.23□□□□□ -0.61
VARS2-213ENST00000625423 UBA6A0AVT1 1052 aaPredicted RBP11.22□□□□□ -0.61
VARS2-213ENST00000625423 DHRS12A0PJE2 317 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 SUPT3HB4E1H0 165 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 FXYD1O00168 92 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 SUPT3HO75486 399 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 SOAT2O75908 522 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 EEF1DP29692 281 aaKnown RBP11.22□□□□□ -0.61
VARS2-213ENST00000625423 PBX3P40426 434 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 CBR4Q8N4T8 237 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 KLHDC9Q8NEP7 349 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 GPR150Q8NGU9 434 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 ZUFSPQ96AP4 578 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 AARSD1Q9BTE6 412 aaKnown RBP11.22□□□□□ -0.61
VARS2-213ENST00000625423 FBXO44Q9H4M3 255 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 ACTL7AQ9Y615 435 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 TRMUO75648 421 aaKnown RBP11.22□□□□□ -0.61
VARS2-213ENST00000625423 IGHA2P01877 340 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 LBPP18428 481 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 HLA-DPA1P20036 260 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 SLC6A2P23975 617 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 SUOXP51687 545 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 APLP1P51693 650 aa11.22□□□□□ -0.61
VARS2-213ENST00000625423 DIO3P55073 304 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms