RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 PDE2AO00408 941 aaPredicted RBP11□□□□□ -0.65
DDX41-218ENST00000625286 DAPK3O43293 454 aa11□□□□□ -0.65
DDX41-218ENST00000625286 SOCS5O75159 536 aa11□□□□□ -0.65
DDX41-218ENST00000625286 PGLSO95336 258 aa11□□□□□ -0.65
DDX41-218ENST00000625286 CPP00450 1065 aa11□□□□□ -0.65
DDX41-218ENST00000625286 CTPS1P17812 591 aa11□□□□□ -0.65
DDX41-218ENST00000625286 TEAD1P28347 426 aa11□□□□□ -0.65
DDX41-218ENST00000625286 RENBPP51606 427 aa11□□□□□ -0.65
DDX41-218ENST00000625286 UBXN1Q04323 297 aa11□□□□□ -0.65
DDX41-218ENST00000625286 KCNAB2Q13303 367 aa11□□□□□ -0.65
DDX41-218ENST00000625286 TRA2AQ13595 282 aaKnown RBP eCLIP11□□□□□ -0.653e-6■□□□□ 8.6
DDX41-218ENST00000625286 CLPPQ16740 277 aaPredicted RBP11□□□□□ -0.65
DDX41-218ENST00000625286 PYCR3Q53H96 274 aa11□□□□□ -0.65
DDX41-218ENST00000625286 TMEM164Q5U3C3 297 aa11□□□□□ -0.65
DDX41-218ENST00000625286 BORAQ6PGQ7 559 aa11□□□□□ -0.65
DDX41-218ENST00000625286 RBM43Q6ZSC3 357 aaKnown RBP11□□□□□ -0.65
DDX41-218ENST00000625286 UNC5BQ8IZJ1 945 aa11□□□□□ -0.65
DDX41-218ENST00000625286 CACNA2D3Q8IZS8 1091 aa11□□□□□ -0.65
DDX41-218ENST00000625286 AGBL5Q8NDL9 886 aa11□□□□□ -0.65
DDX41-218ENST00000625286 ZNF564Q8TBZ8 553 aaPredicted RBP11□□□□□ -0.65
DDX41-218ENST00000625286 PCMTD1Q96MG8 357 aaPredicted RBP11□□□□□ -0.65
DDX41-218ENST00000625286 ZNF599Q96NL3 588 aa11□□□□□ -0.65
DDX41-218ENST00000625286 CTRCQ99895 268 aa11□□□□□ -0.65
DDX41-218ENST00000625286 MGME1Q9BQP7 344 aa11□□□□□ -0.65
DDX41-218ENST00000625286 DDA1Q9BW61 102 aa11□□□□□ -0.65
DDX41-218ENST00000625286 APMAPQ9HDC9 416 aa11□□□□□ -0.65
DDX41-218ENST00000625286 LMBRD1Q9NUN5 540 aa11□□□□□ -0.65
DDX41-218ENST00000625286 PARVAQ9NVD7 372 aa11□□□□□ -0.65
DDX41-218ENST00000625286 SLC39A1Q9NY26 324 aa11□□□□□ -0.65
DDX41-218ENST00000625286 CNOT6Q9ULM6 557 aaKnown RBP11□□□□□ -0.65
DDX41-218ENST00000625286 PHTF1Q9UMS5 762 aa11□□□□□ -0.65
DDX41-218ENST00000625286 SPTAN1Q13813 2472 aaKnown RBP11□□□□□ -0.65
DDX41-218ENST00000625286 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.99□□□□□ -0.65
DDX41-218ENST00000625286 CLEC18AA5D8T8 446 aa10.99□□□□□ -0.65
DDX41-218ENST00000625286 EFCAB7A8K855 629 aa10.99□□□□□ -0.65
DDX41-218ENST00000625286 A8MU76 341 aa10.99□□□□□ -0.65
DDX41-218ENST00000625286 B4E171 279 aa10.99□□□□□ -0.65
DDX41-218ENST00000625286 EIF3CLB5ME19 914 aaKnown RBP10.99□□□□□ -0.65
DDX41-218ENST00000625286 FZD6O60353 706 aa10.99□□□□□ -0.65
DDX41-218ENST00000625286 RAD1O60671 282 aa10.99□□□□□ -0.65
DDX41-218ENST00000625286 ATP1A3P13637 1013 aa10.99□□□□□ -0.65
DDX41-218ENST00000625286 TSPAN7P41732 249 aa10.99□□□□□ -0.65
DDX41-218ENST00000625286 ACTR1BP42025 376 aa10.99□□□□□ -0.65
DDX41-218ENST00000625286 ACTR1AP61163 376 aa10.99□□□□□ -0.65
DDX41-218ENST00000625286 DPTQ07507 201 aa10.99□□□□□ -0.65
DDX41-218ENST00000625286 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.99□□□□□ -0.65
DDX41-218ENST00000625286 ATP1A1-AS1Q5TC04 95 aa10.99□□□□□ -0.65
DDX41-218ENST00000625286 RAET1GQ6H3X3 334 aa10.99□□□□□ -0.65
DDX41-218ENST00000625286 TMEM71Q6P5X7 295 aa10.99□□□□□ -0.65
DDX41-218ENST00000625286 CLEC18BQ6UXF7 455 aa10.99□□□□□ -0.65
DDX41-218ENST00000625286 MARK2Q7KZI7 788 aaKnown RBP10.99□□□□□ -0.65
DDX41-218ENST00000625286 ZNF571Q7Z3V5 609 aaPredicted RBP10.99□□□□□ -0.65
DDX41-218ENST00000625286 ARHGAP22Q7Z5H3 698 aa10.99□□□□□ -0.65
DDX41-218ENST00000625286 POLNQ7Z5Q5 900 aa10.99□□□□□ -0.65
DDX41-218ENST00000625286 SFRP1Q8N474 314 aa10.99□□□□□ -0.65
DDX41-218ENST00000625286 IL22RA1Q8N6P7 574 aa10.99□□□□□ -0.65
DDX41-218ENST00000625286 PAF1Q8N7H5 531 aa10.99□□□□□ -0.65
DDX41-218ENST00000625286 CLEC18CQ8NCF0 446 aa10.99□□□□□ -0.65
DDX41-218ENST00000625286 SLC37A2Q8TED4 501 aa10.99□□□□□ -0.65
DDX41-218ENST00000625286 RTP4Q96DX8 246 aa10.99□□□□□ -0.65
DDX41-218ENST00000625286 RNF31Q96EP0 1072 aa10.99□□□□□ -0.65
DDX41-218ENST00000625286 WDR24Q96S15 920 aa10.99□□□□□ -0.65
DDX41-218ENST00000625286 EIF3CQ99613 913 aaKnown RBP10.99□□□□□ -0.65
DDX41-218ENST00000625286 ADNPQ9H2P0 1102 aa10.99□□□□□ -0.65
DDX41-218ENST00000625286 ZNF71Q9NQZ8 489 aaPredicted RBP10.99□□□□□ -0.65
DDX41-218ENST00000625286 KCNK4Q9NYG8 393 aa10.99□□□□□ -0.65
DDX41-218ENST00000625286 DONSONQ9NYP3 566 aa10.99□□□□□ -0.65
DDX41-218ENST00000625286 ANKMY1Q9P2S6 941 aa10.99□□□□□ -0.65
DDX41-218ENST00000625286 PRKAB1Q9Y478 270 aa10.99□□□□□ -0.65
DDX41-218ENST00000625286 GOLGA6CA6NDK9 693 aa10.98□□□□□ -0.65
DDX41-218ENST00000625286 GOLGA6BA6NDN3 693 aa10.98□□□□□ -0.65
DDX41-218ENST00000625286 K7EM74 188 aa10.98□□□□□ -0.65
DDX41-218ENST00000625286 PSMD11O00231 422 aa10.98□□□□□ -0.65
DDX41-218ENST00000625286 DDX3XO00571 662 aaKnown RBP eCLIP10.98□□□□□ -0.65
DDX41-218ENST00000625286 PRPSAP2O60256 369 aa10.98□□□□□ -0.65
DDX41-218ENST00000625286 DNAJC6O75061 913 aa10.98□□□□□ -0.65
DDX41-218ENST00000625286 PRLP01236 227 aa10.98□□□□□ -0.65
DDX41-218ENST00000625286 FTLP02792 175 aaPredicted RBP10.98□□□□□ -0.65
DDX41-218ENST00000625286 GOLGA6DP0CG33 693 aa10.98□□□□□ -0.65
DDX41-218ENST00000625286 FERP16591 822 aa10.98□□□□□ -0.65
DDX41-218ENST00000625286 IL4RP24394 825 aa10.98□□□□□ -0.65
DDX41-218ENST00000625286 OAS2P29728 719 aaKnown RBP10.98□□□□□ -0.65
DDX41-218ENST00000625286 CSTF2P33240 577 aaKnown RBP eCLIP10.98□□□□□ -0.65
DDX41-218ENST00000625286 FASLGP48023 281 aa10.98□□□□□ -0.65
DDX41-218ENST00000625286 ATP1A2P50993 1020 aa10.98□□□□□ -0.65
DDX41-218ENST00000625286 FOXK1P85037 733 aa10.98□□□□□ -0.65
DDX41-218ENST00000625286 MC2RQ01718 297 aa10.98□□□□□ -0.65
DDX41-218ENST00000625286 DPYSL2Q16555 572 aa10.98□□□□□ -0.65
DDX41-218ENST00000625286 SMTNL2Q2TAL5 461 aa10.98□□□□□ -0.65
DDX41-218ENST00000625286 FAM182AQ5T1J6 154 aa10.98□□□□□ -0.65
DDX41-218ENST00000625286 LRRC66Q68CR7 880 aa10.98□□□□□ -0.65
DDX41-218ENST00000625286 ADAMTSL4Q6UY14 1074 aa10.98□□□□□ -0.65
DDX41-218ENST00000625286 FAM129CQ86XR2 697 aa10.98□□□□□ -0.65
DDX41-218ENST00000625286 PSTKQ8IV42 348 aaKnown RBP10.98□□□□□ -0.65
DDX41-218ENST00000625286 COX14Q96I36 57 aa10.98□□□□□ -0.65
DDX41-218ENST00000625286 SLC45A3Q96JT2 553 aa10.98□□□□□ -0.65
DDX41-218ENST00000625286 CSPG4P5Q96PW8 444 aa10.98□□□□□ -0.65
DDX41-218ENST00000625286 OR2M4Q96R27 311 aa10.98□□□□□ -0.65
DDX41-218ENST00000625286 HAUS4Q9H6D7 363 aa10.98□□□□□ -0.65
DDX41-218ENST00000625286 GOLGA6AQ9NYA3 693 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms