RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.91■□□□□ 0.62
SMN1-211ENST00000625245 SLC17A4Q9Y2C5 497 aa18.91■□□□□ 0.62
SMN1-211ENST00000625245 TRBV23OR9-2A0A075B6M9 112 aa18.9■□□□□ 0.62
SMN1-211ENST00000625245 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.9■□□□□ 0.62
SMN1-211ENST00000625245 PSMD11O00231 422 aa18.9■□□□□ 0.62
SMN1-211ENST00000625245 DDX3XO00571 662 aaKnown RBP eCLIP18.9■□□□□ 0.62
SMN1-211ENST00000625245 MAFKO60675 156 aa18.9■□□□□ 0.62
SMN1-211ENST00000625245 IVLP07476 585 aa18.9■□□□□ 0.62
SMN1-211ENST00000625245 TCF4P15884 667 aa18.9■□□□□ 0.62
SMN1-211ENST00000625245 CSTF2P33240 577 aaKnown RBP eCLIP18.9■□□□□ 0.62
SMN1-211ENST00000625245 PCK1P35558 622 aa18.9■□□□□ 0.62
SMN1-211ENST00000625245 ITKQ08881 620 aa18.9■□□□□ 0.62
SMN1-211ENST00000625245 DPYSL2Q16555 572 aa18.9■□□□□ 0.62
SMN1-211ENST00000625245 BOLA3Q53S33 107 aa18.9■□□□□ 0.62
SMN1-211ENST00000625245 MARK2Q7KZI7 788 aaKnown RBP18.9■□□□□ 0.62
SMN1-211ENST00000625245 POLNQ7Z5Q5 900 aa18.9■□□□□ 0.62
SMN1-211ENST00000625245 IL22RA1Q8N6P7 574 aa18.9■□□□□ 0.62
SMN1-211ENST00000625245 AGBL5Q8NDL9 886 aa18.9■□□□□ 0.62
SMN1-211ENST00000625245 CCDC112Q8NEF3 446 aa18.9■□□□□ 0.62
SMN1-211ENST00000625245 ART4Q93070 314 aa18.9■□□□□ 0.62
SMN1-211ENST00000625245 AP2M1Q96CW1 435 aa18.9■□□□□ 0.62
SMN1-211ENST00000625245 CSPG4P5Q96PW8 444 aa18.9■□□□□ 0.62
SMN1-211ENST00000625245 CDH19Q9H159 772 aa18.9■□□□□ 0.62
SMN1-211ENST00000625245 ABCG8Q9H221 673 aa18.9■□□□□ 0.62
SMN1-211ENST00000625245 MRPL47Q9HD33 250 aaKnown RBP18.9■□□□□ 0.62
SMN1-211ENST00000625245 NT5MQ9NPB1 228 aa18.9■□□□□ 0.62
SMN1-211ENST00000625245 KCNK4Q9NYG8 393 aa18.9■□□□□ 0.62
SMN1-211ENST00000625245 TLN1Q9Y490 2541 aaKnown RBP18.89■□□□□ 0.61
SMN1-211ENST00000625245 IGHV1OR21-1A0A087WYE8 117 aa18.89■□□□□ 0.61
SMN1-211ENST00000625245 CYSRT1A8MQ03 144 aa18.89■□□□□ 0.61
SMN1-211ENST00000625245 RARAP10276 462 aa18.89■□□□□ 0.61
SMN1-211ENST00000625245 SKILP12757 684 aa18.89■□□□□ 0.61
SMN1-211ENST00000625245 TEAD1P28347 426 aa18.89■□□□□ 0.61
SMN1-211ENST00000625245 KLHL30Q0D2K2 578 aa18.89■□□□□ 0.61
SMN1-211ENST00000625245 TRA2AQ13595 282 aaKnown RBP eCLIP18.89■□□□□ 0.61
SMN1-211ENST00000625245 CLCA4Q14CN2 919 aa18.89■□□□□ 0.61
SMN1-211ENST00000625245 RALGPS1Q5JS13 557 aa18.89■□□□□ 0.61
SMN1-211ENST00000625245 TECPR1Q7Z6L1 1165 aa18.89■□□□□ 0.61
SMN1-211ENST00000625245 TRIM74Q86UV6 250 aa18.89■□□□□ 0.61
SMN1-211ENST00000625245 ZNF761Q86XN6 746 aaPredicted RBP18.89■□□□□ 0.61
SMN1-211ENST00000625245 NDUFAF2Q8N183 169 aa18.89■□□□□ 0.61
SMN1-211ENST00000625245 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.89■□□□□ 0.61
SMN1-211ENST00000625245 OR4D9Q8NGE8 314 aa18.89■□□□□ 0.61
SMN1-211ENST00000625245 NKD1Q969G9 470 aa18.89■□□□□ 0.61
SMN1-211ENST00000625245 TRIM11Q96F44 468 aa18.89■□□□□ 0.61
SMN1-211ENST00000625245 SMIM14Q96QK8 99 aa18.89■□□□□ 0.61
SMN1-211ENST00000625245 OR2M4Q96R27 311 aa18.89■□□□□ 0.61
SMN1-211ENST00000625245 SEMA3CQ99985 751 aa18.89■□□□□ 0.61
SMN1-211ENST00000625245 RTN4Q9NQC3 1192 aaKnown RBP18.89■□□□□ 0.61
SMN1-211ENST00000625245 SLC39A1Q9NY26 324 aa18.89■□□□□ 0.61
SMN1-211ENST00000625245 BOD1L1Q8NFC6 3051 aa18.88■□□□□ 0.61
SMN1-211ENST00000625245 SUV39H1O43463 412 aa18.88■□□□□ 0.61
SMN1-211ENST00000625245 PPFIA2O75334 1257 aa18.88■□□□□ 0.61
SMN1-211ENST00000625245 PDHA1P08559 390 aa18.88■□□□□ 0.61
SMN1-211ENST00000625245 CSF2RBP32927 897 aa18.88■□□□□ 0.61
SMN1-211ENST00000625245 SERPINB6P35237 376 aa18.88■□□□□ 0.61
SMN1-211ENST00000625245 ARSDP51689 593 aa18.88■□□□□ 0.61
SMN1-211ENST00000625245 CDH6P55285 790 aa18.88■□□□□ 0.61
SMN1-211ENST00000625245 DPTQ07507 201 aa18.88■□□□□ 0.61
SMN1-211ENST00000625245 FILIP1LQ4L180 1135 aa18.88■□□□□ 0.61
SMN1-211ENST00000625245 E4F1Q66K89 784 aaPredicted RBP18.88■□□□□ 0.61
SMN1-211ENST00000625245 LRRC66Q68CR7 880 aa18.88■□□□□ 0.61
SMN1-211ENST00000625245 FAM129CQ86XR2 697 aa18.88■□□□□ 0.61
SMN1-211ENST00000625245 PIH1D2Q8WWB5 315 aa18.88■□□□□ 0.61
SMN1-211ENST00000625245 SCAMP4Q969E2 229 aa18.88■□□□□ 0.61
SMN1-211ENST00000625245 AHCYL2Q96HN2 611 aaKnown RBP18.88■□□□□ 0.61
SMN1-211ENST00000625245 MCCC1Q96RQ3 725 aaPredicted RBP18.88■□□□□ 0.61
SMN1-211ENST00000625245 FUCA2Q9BTY2 467 aa18.88■□□□□ 0.61
SMN1-211ENST00000625245 SLC12A9Q9BXP2 914 aa18.88■□□□□ 0.61
SMN1-211ENST00000625245 AIPL1Q9NZN9 384 aa18.88■□□□□ 0.61
SMN1-211ENST00000625245 TMEM9Q9P0T7 183 aa18.88■□□□□ 0.61
SMN1-211ENST00000625245 PCDHGA3Q9Y5H0 932 aa18.88■□□□□ 0.61
SMN1-211ENST00000625245 B3GALT1Q9Y5Z6 326 aa18.88■□□□□ 0.61
SMN1-211ENST00000625245 TERTO14746 1132 aaKnown RBP18.87■□□□□ 0.61
SMN1-211ENST00000625245 ASMTLO95671 621 aa18.87■□□□□ 0.61
SMN1-211ENST00000625245 MYBL1P10243 752 aa18.87■□□□□ 0.61
SMN1-211ENST00000625245 THRAP10827 490 aa18.87■□□□□ 0.61
SMN1-211ENST00000625245 UGT1A3P35503 534 aa18.87■□□□□ 0.61
SMN1-211ENST00000625245 PRKCIP41743 596 aa18.87■□□□□ 0.61
SMN1-211ENST00000625245 EPHB1P54762 984 aa18.87■□□□□ 0.61
SMN1-211ENST00000625245 SNAP47Q5SQN1 464 aa18.87■□□□□ 0.61
SMN1-211ENST00000625245 TXNRD3NBQ6F5E7 133 aa18.87■□□□□ 0.61
SMN1-211ENST00000625245 ADAMTSL4Q6UY14 1074 aa18.87■□□□□ 0.61
SMN1-211ENST00000625245 GALNT13Q8IUC8 556 aa18.87■□□□□ 0.61
SMN1-211ENST00000625245 NRSN1Q8IZ57 195 aa18.87■□□□□ 0.61
SMN1-211ENST00000625245 SLC38A3Q99624 504 aa18.87■□□□□ 0.61
SMN1-211ENST00000625245 DPYSL5Q9BPU6 564 aa18.87■□□□□ 0.61
SMN1-211ENST00000625245 SLC25A18Q9H1K4 315 aa18.87■□□□□ 0.61
SMN1-211ENST00000625245 PCDH18Q9HCL0 1135 aa18.87■□□□□ 0.61
SMN1-211ENST00000625245 GEMIN8Q9NWZ8 242 aaKnown RBP18.87■□□□□ 0.61
SMN1-211ENST00000625245 OCIAD1Q9NX40 245 aa18.87■□□□□ 0.61
SMN1-211ENST00000625245 HECTD1Q9ULT8 2610 aa18.86■□□□□ 0.61
SMN1-211ENST00000625245 EFCAB7A8K855 629 aa18.86■□□□□ 0.61
SMN1-211ENST00000625245 INPP4BO15327 924 aa18.86■□□□□ 0.61
SMN1-211ENST00000625245 SOD1P00441 154 aa18.86■□□□□ 0.61
SMN1-211ENST00000625245 LIFP15018 202 aa18.86■□□□□ 0.61
SMN1-211ENST00000625245 PTSQ03393 145 aa18.86■□□□□ 0.61
SMN1-211ENST00000625245 SQSTM1Q13501 440 aa18.86■□□□□ 0.61
SMN1-211ENST00000625245 KRT81Q14533 505 aa18.86■□□□□ 0.61
SMN1-211ENST00000625245 PYCR3Q53H96 274 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms