RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 PRICKLE1Q96MT3 831 aaPredicted RBP9.41□□□□□ -0.9
PDPN-212ENST00000621990 TSC22D3Q99576 134 aa9.41□□□□□ -0.9
PDPN-212ENST00000621990 PKP2Q99959 881 aa9.41□□□□□ -0.9
PDPN-212ENST00000621990 TDRD1Q9BXT4 1180 aaKnown RBP9.41□□□□□ -0.9
PDPN-212ENST00000621990 AKTIPQ9H8T0 292 aa9.41□□□□□ -0.9
PDPN-212ENST00000621990 SYTL2Q9HCH5 934 aa9.41□□□□□ -0.9
PDPN-212ENST00000621990 UBA2Q9UBT2 640 aaPredicted RBP9.41□□□□□ -0.9
PDPN-212ENST00000621990 SRRDQ9UH36 339 aa9.41□□□□□ -0.9
PDPN-212ENST00000621990 OAS3Q9Y6K5 1087 aaKnown RBP9.41□□□□□ -0.9
PDPN-212ENST00000621990 ZFP37Q9Y6Q3 630 aaPredicted RBP9.41□□□□□ -0.9
PDPN-212ENST00000621990 TCRBV3S1A0A5B6 114 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 ILVBLA1L0T0 632 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 PRORSD1PA6NEY8 169 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 H0YJX3 145 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 UBXN8O00124 270 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 INSIG1O15503 277 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 GPC4O75487 556 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 CLDN11O75508 207 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 SLC4A1P02730 911 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 F11P03951 625 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 GALTP07902 379 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 RGRP47804 291 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 SLC11A2P49281 568 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 GATMP50440 423 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 ATP6V0D1P61421 351 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 RHDQ02161 417 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 SP3Q02447 781 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 C6orf10Q5SRN2 563 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 CHST9Q7L1S5 443 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 RAB44Q7Z6P3 723 aaPredicted RBP9.4□□□□□ -0.9
PDPN-212ENST00000621990 MFN1Q8IWA4 741 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 PDZD8Q8NEN9 1154 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 OR7D4Q8NG98 312 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 PLD4Q96BZ4 506 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 UHRF1Q96T88 793 aaPredicted RBP9.4□□□□□ -0.9
PDPN-212ENST00000621990 GPATCH1Q9BRR8 931 aaKnown RBP9.4□□□□□ -0.9
PDPN-212ENST00000621990 TTPALQ9BTX7 342 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 ADA2Q9NZK5 511 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 PHF24Q9UPV7 400 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 ZNF840PA6NDX5 716 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 ARVCFO00192 962 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 MRASO14807 208 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 AZIN1O14977 448 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 PMLP29590 882 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 HSPA13P48723 471 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 LCP2Q13094 533 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 SAMD4BQ5PRF9 694 aaKnown RBP9.4□□□□□ -0.9
PDPN-212ENST00000621990 TAS1R1Q7RTX1 841 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 TMEM173Q86WV6 379 aaPredicted RBP9.4□□□□□ -0.9
PDPN-212ENST00000621990 PCDH20Q8N6Y1 951 aaKnown RBP9.4□□□□□ -0.9
PDPN-212ENST00000621990 MDGA1Q8NFP4 955 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 STAG3L4Q8TBR4 150 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 GIPC2Q8TF65 315 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 BCL7CQ8WUZ0 217 aaPredicted RBP9.4□□□□□ -0.9
PDPN-212ENST00000621990 BIRC8Q96P09 236 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 GBP5Q96PP8 586 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 GCNAQ96QF7 691 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 CINPQ9BW66 212 aaPredicted RBP9.4□□□□□ -0.9
PDPN-212ENST00000621990 MRPL9Q9BYD2 267 aaKnown RBP9.4□□□□□ -0.9
PDPN-212ENST00000621990 Q9H521 79 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 COPS7BQ9H9Q2 264 aaPredicted RBP9.4□□□□□ -0.9
PDPN-212ENST00000621990 STARD7Q9NQZ5 370 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 TAS2R13Q9NYV9 303 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 ABCD2Q9UBJ2 740 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 HCSTQ9UBK5 93 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 ACTL7AQ9Y615 435 aa9.4□□□□□ -0.9
PDPN-212ENST00000621990 C15orf38-AP3S2A0A0A6YYH1 394 aa9.4□□□□□ -0.91
PDPN-212ENST00000621990 RNASEH2AO75792 299 aaKnown RBP9.4□□□□□ -0.91
PDPN-212ENST00000621990 SIX3O95343 332 aaPredicted RBP9.4□□□□□ -0.91
PDPN-212ENST00000621990 MATN4O95460 622 aa9.4□□□□□ -0.91
PDPN-212ENST00000621990 RPS17P08708 135 aaKnown RBP9.4□□□□□ -0.91
PDPN-212ENST00000621990 PIRTP0C851 137 aa9.4□□□□□ -0.91
PDPN-212ENST00000621990 TSPAN8P19075 237 aa9.4□□□□□ -0.91
PDPN-212ENST00000621990 HDCP19113 662 aa9.4□□□□□ -0.91
PDPN-212ENST00000621990 CDH13P55290 713 aa9.4□□□□□ -0.91
PDPN-212ENST00000621990 OXCT1P55809 520 aa9.4□□□□□ -0.91
PDPN-212ENST00000621990 PFKFB4Q16877 469 aa9.4□□□□□ -0.91
PDPN-212ENST00000621990 LIN52Q52LA3 116 aa9.4□□□□□ -0.91
PDPN-212ENST00000621990 COQ5Q5HYK3 327 aa9.4□□□□□ -0.91
PDPN-212ENST00000621990 IL31Q6EBC2 164 aa9.4□□□□□ -0.91
PDPN-212ENST00000621990 GLT6D1Q7Z4J2 308 aa9.4□□□□□ -0.91
PDPN-212ENST00000621990 ARPINQ7Z6K5 226 aa9.4□□□□□ -0.91
PDPN-212ENST00000621990 NPAS4Q8IUM7 802 aa9.4□□□□□ -0.91
PDPN-212ENST00000621990 FAM156AQ8NDB6 213 aa9.4□□□□□ -0.91
PDPN-212ENST00000621990 DBF4BQ8NFT6 615 aa9.4□□□□□ -0.91
PDPN-212ENST00000621990 OR9I1Q8NGQ6 314 aa9.4□□□□□ -0.91
PDPN-212ENST00000621990 PXYLP1Q8TE99 480 aa9.4□□□□□ -0.91
PDPN-212ENST00000621990 TWIST2Q8WVJ9 160 aa9.4□□□□□ -0.91
PDPN-212ENST00000621990 NCSTNQ92542 709 aa9.4□□□□□ -0.91
PDPN-212ENST00000621990 TUBB1Q9H4B7 451 aa9.4□□□□□ -0.91
PDPN-212ENST00000621990 FBRSL1Q9HCM7 1045 aaKnown RBP9.4□□□□□ -0.91
PDPN-212ENST00000621990 MID1IP1Q9NPA3 183 aa9.4□□□□□ -0.91
PDPN-212ENST00000621990 SDR39U1Q9NRG7 319 aaPredicted RBP9.4□□□□□ -0.91
PDPN-212ENST00000621990 VPS9D1Q9Y2B5 631 aa9.4□□□□□ -0.91
PDPN-212ENST00000621990 ATP6AP2A0A1C7CYW4 349 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 PPP6CO00743 305 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 STX16O14662 325 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 HOXA2O43364 376 aa9.39□□□□□ -0.91
PDPN-212ENST00000621990 CLASP2O75122 1294 aaKnown RBP9.39□□□□□ -0.91
PDPN-212ENST00000621990 VPS4BO75351 444 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms