RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 SRP72O76094 671 aaKnown RBP21.39■■□□□ 1.01
SPAST-204ENST00000621856 LTA4HP09960 611 aaKnown RBP21.39■■□□□ 1.01
SPAST-204ENST00000621856 FMO4P31512 558 aa21.39■■□□□ 1.01
SPAST-204ENST00000621856 VASPP50552 380 aaPredicted RBP21.39■■□□□ 1.01
SPAST-204ENST00000621856 SEMG2Q02383 582 aa21.39■■□□□ 1.01
SPAST-204ENST00000621856 ITGA9Q13797 1035 aa21.39■■□□□ 1.01
SPAST-204ENST00000621856 GRM2Q14416 872 aa21.39■■□□□ 1.01
SPAST-204ENST00000621856 CDKN3Q16667 212 aa21.39■■□□□ 1.01
SPAST-204ENST00000621856 PTPRNQ16849 979 aa21.39■■□□□ 1.01
SPAST-204ENST00000621856 GAB4Q2WGN9 574 aa21.39■■□□□ 1.01
SPAST-204ENST00000621856 AGAP9Q5VTM2 703 aa21.39■■□□□ 1.01
SPAST-204ENST00000621856 FAM151BQ6UXP7 276 aa21.39■■□□□ 1.01
SPAST-204ENST00000621856 ZYG11AQ6WRX3 759 aa21.39■■□□□ 1.01
SPAST-204ENST00000621856 TPRG1Q6ZUI0 275 aa21.39■■□□□ 1.01
SPAST-204ENST00000621856 TSPAN33Q86UF1 283 aa21.39■■□□□ 1.01
SPAST-204ENST00000621856 PIM3Q86V86 326 aa21.39■■□□□ 1.01
SPAST-204ENST00000621856 SCRN2Q96FV2 425 aa21.39■■□□□ 1.01
SPAST-204ENST00000621856 LYSMD1Q96S90 227 aa21.39■■□□□ 1.01
SPAST-204ENST00000621856 IGSF5Q9NSI5 407 aa21.39■■□□□ 1.01
SPAST-204ENST00000621856 THAP1Q9NVV9 213 aa21.39■■□□□ 1.01
SPAST-204ENST00000621856 XPR1Q9UBH6 696 aa21.39■■□□□ 1.01
SPAST-204ENST00000621856 PPIL1Q9Y3C6 166 aa21.39■■□□□ 1.01
SPAST-204ENST00000621856 DOCK8Q8NF50 2099 aa21.39■■□□□ 1.01
SPAST-204ENST00000621856 CCT8L1PA6NM43 557 aa21.38■■□□□ 1.01
SPAST-204ENST00000621856 SNNO75324 88 aaPredicted RBP21.38■■□□□ 1.01
SPAST-204ENST00000621856 RHOBTB1O94844 696 aa21.38■■□□□ 1.01
SPAST-204ENST00000621856 CCDC166P0CW27 439 aa21.38■■□□□ 1.01
SPAST-204ENST00000621856 GRK2P25098 689 aa21.38■■□□□ 1.01
SPAST-204ENST00000621856 POLR2LP62875 67 aaKnown RBP21.38■■□□□ 1.01
SPAST-204ENST00000621856 OCRLQ01968 901 aa21.38■■□□□ 1.01
SPAST-204ENST00000621856 KLC3Q6P597 504 aa21.38■■□□□ 1.01
SPAST-204ENST00000621856 CRTC1Q6UUV9 634 aa21.38■■□□□ 1.01
SPAST-204ENST00000621856 CRLF3Q8IUI8 442 aa21.38■■□□□ 1.01
SPAST-204ENST00000621856 NXPE3Q969Y0 559 aa21.38■■□□□ 1.01
SPAST-204ENST00000621856 GPR78Q96P69 363 aa21.38■■□□□ 1.01
SPAST-204ENST00000621856 MTG2Q9H4K7 406 aa21.38■■□□□ 1.01
SPAST-204ENST00000621856 ZNF395Q9H8N7 513 aaPredicted RBP21.38■■□□□ 1.01
SPAST-204ENST00000621856 CLEC1BQ9P126 229 aa21.38■■□□□ 1.01
SPAST-204ENST00000621856 PLA2G4CQ9UP65 541 aa21.38■■□□□ 1.01
SPAST-204ENST00000621856 RANBP2P49792 3224 aaKnown RBP21.38■■□□□ 1.01
SPAST-204ENST00000621856 ATXN2Q99700 1313 aaKnown RBP21.38■■□□□ 1.01
SPAST-204ENST00000621856 ZNF106Q9H2Y7 1883 aaKnown RBP21.38■■□□□ 1.01
SPAST-204ENST00000621856 TGDSO95455 350 aa21.38■■□□□ 1.01
SPAST-204ENST00000621856 SLC1A6P48664 564 aa21.38■■□□□ 1.01
SPAST-204ENST00000621856 PDAP1Q13442 181 aaKnown RBP21.38■■□□□ 1.01
SPAST-204ENST00000621856 FNDC3BQ53EP0 1204 aaKnown RBP21.38■■□□□ 1.01
SPAST-204ENST00000621856 ARSIQ5FYB1 569 aa21.38■■□□□ 1.01
SPAST-204ENST00000621856 SPNS2Q8IVW8 549 aa21.38■■□□□ 1.01
SPAST-204ENST00000621856 RFWD2Q8NHY2 731 aa21.38■■□□□ 1.01
SPAST-204ENST00000621856 C10orf82Q8WW14 230 aa21.38■■□□□ 1.01
SPAST-204ENST00000621856 C19orf43Q9BQ61 176 aa21.38■■□□□ 1.01
SPAST-204ENST00000621856 MRPL57Q9BQC6 102 aaKnown RBP21.38■■□□□ 1.01
SPAST-204ENST00000621856 KXD1Q9BQD3 176 aa21.38■■□□□ 1.01
SPAST-204ENST00000621856 MRPL46Q9H2W6 279 aaKnown RBP21.38■■□□□ 1.01
SPAST-204ENST00000621856 ZNF576Q9H609 170 aa21.38■■□□□ 1.01
SPAST-204ENST00000621856 BRD9Q9H8M2 597 aa21.38■■□□□ 1.01
SPAST-204ENST00000621856 IL36AQ9UHA7 158 aa21.38■■□□□ 1.01
SPAST-204ENST00000621856 DCTN4Q9UJW0 460 aa21.38■■□□□ 1.01
SPAST-204ENST00000621856 APPL1Q9UKG1 709 aa21.38■■□□□ 1.01
SPAST-204ENST00000621856 USH1CQ9Y6N9 552 aa21.38■■□□□ 1.01
SPAST-204ENST00000621856 WASF2Q9Y6W5 498 aa21.38■■□□□ 1.01
SPAST-204ENST00000621856 PRRT4C9JH25 899 aa21.37■■□□□ 1.01
SPAST-204ENST00000621856 LEFTY1O75610 366 aa21.37■■□□□ 1.01
SPAST-204ENST00000621856 PRAMEF1O95521 474 aa21.37■■□□□ 1.01
SPAST-204ENST00000621856 FCHO2Q0JRZ9 810 aa21.37■■□□□ 1.01
SPAST-204ENST00000621856 MESP2Q0VG99 397 aa21.37■■□□□ 1.01
SPAST-204ENST00000621856 LRRC66Q68CR7 880 aa21.37■■□□□ 1.01
SPAST-204ENST00000621856 BRAT1Q6PJG6 821 aa21.37■■□□□ 1.01
SPAST-204ENST00000621856 TRPM8Q7Z2W7 1104 aa21.37■■□□□ 1.01
SPAST-204ENST00000621856 ZNF366Q8N895 744 aa21.37■■□□□ 1.01
SPAST-204ENST00000621856 RMDN2Q96LZ7 410 aa21.37■■□□□ 1.01
SPAST-204ENST00000621856 RIPOR3Q96MK2 946 aa21.37■■□□□ 1.01
SPAST-204ENST00000621856 MCCC1Q96RQ3 725 aaPredicted RBP21.37■■□□□ 1.01
SPAST-204ENST00000621856 PLA2G2FQ9BZM2 168 aa21.37■■□□□ 1.01
SPAST-204ENST00000621856 POPDC3Q9HBV1 291 aa21.37■■□□□ 1.01
SPAST-204ENST00000621856 TRIM13O60858 407 aa21.36■■□□□ 1.01
SPAST-204ENST00000621856 H2AFYO75367 372 aaKnown RBP21.36■■□□□ 1.01
SPAST-204ENST00000621856 BPIP17213 487 aa21.36■■□□□ 1.01
SPAST-204ENST00000621856 ITGALP20701 1170 aa21.36■■□□□ 1.01
SPAST-204ENST00000621856 SPAM1P38567 509 aa21.36■■□□□ 1.01
SPAST-204ENST00000621856 RUNX3Q13761 415 aa21.36■■□□□ 1.01
SPAST-204ENST00000621856 LRRC73Q5JTD7 316 aa21.36■■□□□ 1.01
SPAST-204ENST00000621856 YTHDF3Q7Z739 585 aaKnown RBP21.36■■□□□ 1.01
SPAST-204ENST00000621856 STK40Q8N2I9 435 aa21.36■■□□□ 1.01
SPAST-204ENST00000621856 TMEM151AQ8N4L1 468 aa21.36■■□□□ 1.01
SPAST-204ENST00000621856 ZNF398Q8TD17 642 aa21.36■■□□□ 1.01
SPAST-204ENST00000621856 PPP4R1Q8TF05 950 aa21.36■■□□□ 1.01
SPAST-204ENST00000621856 ANKRD49Q8WVL7 239 aa21.36■■□□□ 1.01
SPAST-204ENST00000621856 PBXIP1Q96AQ6 731 aa21.36■■□□□ 1.01
SPAST-204ENST00000621856 FAM136AQ96C01 138 aa21.36■■□□□ 1.01
SPAST-204ENST00000621856 OSBPL1AQ9BXW6 950 aa21.36■■□□□ 1.01
SPAST-204ENST00000621856 S1PR5Q9H228 398 aa21.36■■□□□ 1.01
SPAST-204ENST00000621856 ASB8Q9H765 288 aa21.36■■□□□ 1.01
SPAST-204ENST00000621856 ABCF3Q9NUQ8 709 aa21.36■■□□□ 1.01
SPAST-204ENST00000621856 OXSMQ9NWU1 459 aa21.36■■□□□ 1.01
SPAST-204ENST00000621856 TAS2R13Q9NYV9 303 aa21.36■■□□□ 1.01
SPAST-204ENST00000621856 KIAA1549LQ6ZVL6 1849 aa21.36■■□□□ 1.01
SPAST-204ENST00000621856 A0A0G2JND7 137 aa21.35■■□□□ 1.01
SPAST-204ENST00000621856 GLYATL1P3A0A0U1RQE8 302 aa21.35■■□□□ 1.01
SPAST-204ENST00000621856 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms