RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 UBE3AQ05086 875 aa17.3■□□□□ 0.36
PCDHGC3-205ENST00000617641 RPS27LQ71UM5 84 aaKnown RBP17.3■□□□□ 0.36
PCDHGC3-205ENST00000617641 PPP1R36Q96LQ0 422 aa17.3■□□□□ 0.36
PCDHGC3-205ENST00000617641 ZSWIM3Q96MP5 696 aa17.3■□□□□ 0.36
PCDHGC3-205ENST00000617641 LINC00597Q9H2U6 94 aa17.3■□□□□ 0.36
PCDHGC3-205ENST00000617641 MAGEE1Q9HCI5 957 aa17.3■□□□□ 0.36
PCDHGC3-205ENST00000617641 NCKIPSDQ9NZQ3 722 aa17.3■□□□□ 0.36
PCDHGC3-205ENST00000617641 RWDD3Q9Y3V2 267 aa17.3■□□□□ 0.36
PCDHGC3-205ENST00000617641 PKP3Q9Y446 797 aa17.3■□□□□ 0.36
PCDHGC3-205ENST00000617641 HTRA2O43464 458 aaPredicted RBP17.29■□□□□ 0.36
PCDHGC3-205ENST00000617641 CSNK1DP48730 415 aa17.29■□□□□ 0.36
PCDHGC3-205ENST00000617641 KDSRQ06136 332 aa17.29■□□□□ 0.36
PCDHGC3-205ENST00000617641 SNCBQ16143 134 aa17.29■□□□□ 0.36
PCDHGC3-205ENST00000617641 PTPRNQ16849 979 aa17.29■□□□□ 0.36
PCDHGC3-205ENST00000617641 SETMARQ53H47 684 aaPredicted RBP17.29■□□□□ 0.36
PCDHGC3-205ENST00000617641 PIWIL4Q7Z3Z4 852 aaKnown RBP17.29■□□□□ 0.36
PCDHGC3-205ENST00000617641 GRASPQ7Z6J2 395 aaPredicted RBP17.29■□□□□ 0.36
PCDHGC3-205ENST00000617641 BBS2Q9BXC9 721 aa17.29■□□□□ 0.36
PCDHGC3-205ENST00000617641 CADM1Q9BY67 442 aaKnown RBP17.29■□□□□ 0.36
PCDHGC3-205ENST00000617641 CCDC68Q9H2F9 335 aa17.29■□□□□ 0.36
PCDHGC3-205ENST00000617641 POPDC3Q9HBV1 291 aa17.29■□□□□ 0.36
PCDHGC3-205ENST00000617641 TAS2R1Q9NYW7 299 aa17.29■□□□□ 0.36
PCDHGC3-205ENST00000617641 GRXCR1A8MXD5 290 aa17.29■□□□□ 0.36
PCDHGC3-205ENST00000617641 C5orf67F2Z3F1 127 aa17.29■□□□□ 0.36
PCDHGC3-205ENST00000617641 HDAC3O15379 428 aa17.29■□□□□ 0.36
PCDHGC3-205ENST00000617641 GYG2O15488 501 aa17.29■□□□□ 0.36
PCDHGC3-205ENST00000617641 GRID2O43424 1007 aa17.29■□□□□ 0.36
PCDHGC3-205ENST00000617641 BNIP3LO60238 219 aa17.29■□□□□ 0.36
PCDHGC3-205ENST00000617641 HNRNPLP14866 589 aaKnown RBP eCLIP17.29■□□□□ 0.36
PCDHGC3-205ENST00000617641 XIAPP98170 497 aa17.29■□□□□ 0.36
PCDHGC3-205ENST00000617641 SEL1L3Q68CR1 1132 aa17.29■□□□□ 0.36
PCDHGC3-205ENST00000617641 RTL10Q7L3V2 364 aa17.29■□□□□ 0.36
PCDHGC3-205ENST00000617641 OR2AP1Q8NGE2 309 aa17.29■□□□□ 0.36
PCDHGC3-205ENST00000617641 ING5Q8WYH8 240 aa17.29■□□□□ 0.36
PCDHGC3-205ENST00000617641 EXT2Q93063 718 aa17.29■□□□□ 0.36
PCDHGC3-205ENST00000617641 BIRC8Q96P09 236 aa17.29■□□□□ 0.36
PCDHGC3-205ENST00000617641 OR52B2Q96RD2 323 aa17.29■□□□□ 0.36
PCDHGC3-205ENST00000617641 ATP13A3Q9H7F0 1226 aa17.29■□□□□ 0.36
PCDHGC3-205ENST00000617641 TAGLN3Q9UI15 199 aa17.29■□□□□ 0.36
PCDHGC3-205ENST00000617641 GOLGA8QA0A0J9YX86 632 aa17.28■□□□□ 0.36
PCDHGC3-205ENST00000617641 GOLGA8OA6NCC3 632 aa17.28■□□□□ 0.36
PCDHGC3-205ENST00000617641 TMEM233B4DJY2 109 aa17.28■□□□□ 0.36
PCDHGC3-205ENST00000617641 E9PBE3 544 aa17.28■□□□□ 0.36
PCDHGC3-205ENST00000617641 GOLGA8NF8WBI6 632 aa17.28■□□□□ 0.36
PCDHGC3-205ENST00000617641 H3BMM5 538 aa17.28■□□□□ 0.36
PCDHGC3-205ENST00000617641 H7C0S8 307 aa17.28■□□□□ 0.36
PCDHGC3-205ENST00000617641 NEMP1O14524 444 aa17.28■□□□□ 0.36
PCDHGC3-205ENST00000617641 KLHL41O60662 606 aa17.28■□□□□ 0.36
PCDHGC3-205ENST00000617641 XYLBO75191 536 aa17.28■□□□□ 0.36
PCDHGC3-205ENST00000617641 PENKP01210 267 aaPredicted RBP17.28■□□□□ 0.36
PCDHGC3-205ENST00000617641 NCF2P19878 526 aaPredicted RBP17.28■□□□□ 0.36
PCDHGC3-205ENST00000617641 HOXA9P31269 272 aa17.28■□□□□ 0.36
PCDHGC3-205ENST00000617641 HMGCLP35914 325 aa17.28■□□□□ 0.36
PCDHGC3-205ENST00000617641 TTPAP49638 278 aa17.28■□□□□ 0.36
PCDHGC3-205ENST00000617641 TBCCQ15814 346 aa17.28■□□□□ 0.36
PCDHGC3-205ENST00000617641 PRSS36Q5K4E3 855 aa17.28■□□□□ 0.36
PCDHGC3-205ENST00000617641 PAQR3Q6TCH7 311 aa17.28■□□□□ 0.36
PCDHGC3-205ENST00000617641 TAS2R42Q7RTR8 314 aa17.28■□□□□ 0.36
PCDHGC3-205ENST00000617641 ZSWIM9Q86XI8 627 aa17.28■□□□□ 0.36
PCDHGC3-205ENST00000617641 FBXO27Q8NI29 283 aa17.28■□□□□ 0.36
PCDHGC3-205ENST00000617641 CCDC126Q96EE4 140 aa17.28■□□□□ 0.36
PCDHGC3-205ENST00000617641 OSBPL1AQ9BXW6 950 aa17.28■□□□□ 0.36
PCDHGC3-205ENST00000617641 NUF2Q9BZD4 464 aa17.28■□□□□ 0.36
PCDHGC3-205ENST00000617641 WDR55Q9H6Y2 383 aaPredicted RBP17.28■□□□□ 0.36
PCDHGC3-205ENST00000617641 TAS2R13Q9NYV9 303 aa17.28■□□□□ 0.36
PCDHGC3-205ENST00000617641 GALPQ9UBC7 116 aa17.28■□□□□ 0.36
PCDHGC3-205ENST00000617641 SORCS3Q9UPU3 1222 aa17.28■□□□□ 0.36
PCDHGC3-205ENST00000617641 A0A0J9YYE9 177 aa17.27■□□□□ 0.36
PCDHGC3-205ENST00000617641 SOCS5O75159 536 aa17.27■□□□□ 0.36
PCDHGC3-205ENST00000617641 TRBC1P01850 177 aa17.27■□□□□ 0.36
PCDHGC3-205ENST00000617641 AOC1P19801 751 aa17.27■□□□□ 0.36
PCDHGC3-205ENST00000617641 SP100P23497 879 aaPredicted RBP17.27■□□□□ 0.36
PCDHGC3-205ENST00000617641 MAPK8P45983 427 aa17.27■□□□□ 0.36
PCDHGC3-205ENST00000617641 RIPK1Q13546 671 aa17.27■□□□□ 0.36
PCDHGC3-205ENST00000617641 CBX2Q14781 532 aaPredicted RBP17.27■□□□□ 0.36
PCDHGC3-205ENST00000617641 OR4D1Q15615 310 aa17.27■□□□□ 0.36
PCDHGC3-205ENST00000617641 ZNF77Q15935 545 aa17.27■□□□□ 0.36
PCDHGC3-205ENST00000617641 FAM109BQ6ICB4 259 aaPredicted RBP17.27■□□□□ 0.36
PCDHGC3-205ENST00000617641 RBM23Q86U06 439 aaKnown RBP17.27■□□□□ 0.36
PCDHGC3-205ENST00000617641 METTL3Q86U44 580 aaKnown RBP17.27■□□□□ 0.36
PCDHGC3-205ENST00000617641 TEX9Q8N6V9 391 aa17.27■□□□□ 0.36
PCDHGC3-205ENST00000617641 FAM13CQ8NE31 585 aa17.27■□□□□ 0.36
PCDHGC3-205ENST00000617641 IRF7Q92985 503 aa17.27■□□□□ 0.36
PCDHGC3-205ENST00000617641 CNDP1Q96KN2 507 aa17.27■□□□□ 0.36
PCDHGC3-205ENST00000617641 GPR21Q99679 349 aa17.27■□□□□ 0.36
PCDHGC3-205ENST00000617641 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.27■□□□□ 0.36
PCDHGC3-205ENST00000617641 GBF1Q92538 1859 aa17.27■□□□□ 0.36
PCDHGC3-205ENST00000617641 C1orf232A0A0U1RR37 186 aa17.27■□□□□ 0.35
PCDHGC3-205ENST00000617641 B2RBV5 119 aa17.27■□□□□ 0.35
PCDHGC3-205ENST00000617641 JUNP05412 331 aaKnown RBP17.27■□□□□ 0.35
PCDHGC3-205ENST00000617641 HNRNPA1P09651 372 aaKnown RBP eCLIP17.27■□□□□ 0.35
PCDHGC3-205ENST00000617641 TYRP14679 529 aa17.27■□□□□ 0.35
PCDHGC3-205ENST00000617641 CEBPBP17676 345 aa17.27■□□□□ 0.35
PCDHGC3-205ENST00000617641 HNF1BP35680 557 aa17.27■□□□□ 0.35
PCDHGC3-205ENST00000617641 RPL26P61254 145 aaKnown RBP17.27■□□□□ 0.35
PCDHGC3-205ENST00000617641 CTSL3PQ5NE16 218 aa17.27■□□□□ 0.35
PCDHGC3-205ENST00000617641 C22orf39Q6P5X5 142 aa17.27■□□□□ 0.35
PCDHGC3-205ENST00000617641 KDM1BQ8NB78 822 aa17.27■□□□□ 0.35
PCDHGC3-205ENST00000617641 VOPP1Q96AW1 172 aa17.27■□□□□ 0.35
PCDHGC3-205ENST00000617641 SLC30A3Q99726 388 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms