RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 PDIA2Q13087 525 aaKnown RBP15.56■□□□□ 0.08
PCDHGC3-204ENST00000617222 STAT4Q14765 748 aa15.56■□□□□ 0.08
PCDHGC3-204ENST00000617222 ZDHHC20Q5W0Z9 365 aa15.56■□□□□ 0.08
PCDHGC3-204ENST00000617222 ESRP1Q6NXG1 681 aaKnown RBP15.56■□□□□ 0.08
PCDHGC3-204ENST00000617222 KDM7AQ6ZMT4 941 aa15.56■□□□□ 0.08
PCDHGC3-204ENST00000617222 ZNF765Q7L2R6 523 aa15.56■□□□□ 0.08
PCDHGC3-204ENST00000617222 NLRP8Q86W28 1048 aa15.56■□□□□ 0.08
PCDHGC3-204ENST00000617222 IGDCC3Q8IVU1 814 aa15.56■□□□□ 0.08
PCDHGC3-204ENST00000617222 PELI3Q8N2H9 469 aa15.56■□□□□ 0.08
PCDHGC3-204ENST00000617222 TMEM145Q8NBT3 493 aa15.56■□□□□ 0.08
PCDHGC3-204ENST00000617222 PLA2G15Q8NCC3 412 aa15.56■□□□□ 0.08
PCDHGC3-204ENST00000617222 DENND6BQ8NEG7 585 aa15.56■□□□□ 0.08
PCDHGC3-204ENST00000617222 PTCD2Q8WV60 388 aaKnown RBP15.56■□□□□ 0.08
PCDHGC3-204ENST00000617222 UBXN4Q92575 508 aa15.56■□□□□ 0.08
PCDHGC3-204ENST00000617222 PIGKQ92643 395 aa15.56■□□□□ 0.08
PCDHGC3-204ENST00000617222 STAMBPL1Q96FJ0 436 aa15.56■□□□□ 0.08
PCDHGC3-204ENST00000617222 CDKN2AIPNLQ96HQ2 116 aa15.56■□□□□ 0.08
PCDHGC3-204ENST00000617222 BMFQ96LC9 184 aa15.56■□□□□ 0.08
PCDHGC3-204ENST00000617222 TBATAQ96M53 351 aa15.56■□□□□ 0.08
PCDHGC3-204ENST00000617222 SPATA16Q9BXB7 569 aa15.56■□□□□ 0.08
PCDHGC3-204ENST00000617222 MRM3Q9HC36 420 aaKnown RBP15.56■□□□□ 0.08
PCDHGC3-204ENST00000617222 IL26Q9NPH9 171 aa15.56■□□□□ 0.08
PCDHGC3-204ENST00000617222 AASDHPPTQ9NRN7 309 aa15.56■□□□□ 0.08
PCDHGC3-204ENST00000617222 RIMKLBQ9ULI2 386 aa15.56■□□□□ 0.08
PCDHGC3-204ENST00000617222 ATXN2Q99700 1313 aaKnown RBP15.56■□□□□ 0.08
PCDHGC3-204ENST00000617222 TRPM6Q9BX84 2022 aa15.56■□□□□ 0.08
PCDHGC3-204ENST00000617222 CACNA1HO95180 2353 aa15.56■□□□□ 0.08
PCDHGC3-204ENST00000617222 FAM237BA0A1B0GVD1 139 aa15.55■□□□□ 0.08
PCDHGC3-204ENST00000617222 POM121BA6NF01 834 aa15.55■□□□□ 0.08
PCDHGC3-204ENST00000617222 K7ESM1 405 aa15.55■□□□□ 0.08
PCDHGC3-204ENST00000617222 FPGTO14772 594 aa15.55■□□□□ 0.08
PCDHGC3-204ENST00000617222 HADHAP40939 763 aa15.55■□□□□ 0.08
PCDHGC3-204ENST00000617222 ELK3P41970 407 aa15.55■□□□□ 0.08
PCDHGC3-204ENST00000617222 GPR1P46091 355 aa15.55■□□□□ 0.08
PCDHGC3-204ENST00000617222 ARSDP51689 593 aa15.55■□□□□ 0.08
PCDHGC3-204ENST00000617222 DPTQ07507 201 aa15.55■□□□□ 0.08
PCDHGC3-204ENST00000617222 CUL1Q13616 776 aa15.55■□□□□ 0.08
PCDHGC3-204ENST00000617222 INPP5AQ14642 412 aa15.55■□□□□ 0.08
PCDHGC3-204ENST00000617222 CHRNA6Q15825 494 aa15.55■□□□□ 0.08
PCDHGC3-204ENST00000617222 HENMT1Q5T8I9 393 aaKnown RBP15.55■□□□□ 0.08
PCDHGC3-204ENST00000617222 RAET1GQ6H3X3 334 aa15.55■□□□□ 0.08
PCDHGC3-204ENST00000617222 PNCKQ6P2M8 343 aa15.55■□□□□ 0.08
PCDHGC3-204ENST00000617222 FAM151BQ6UXP7 276 aa15.55■□□□□ 0.08
PCDHGC3-204ENST00000617222 MICALCLQ6ZW33 695 aa15.55■□□□□ 0.08
PCDHGC3-204ENST00000617222 CENPUQ71F23 418 aa15.55■□□□□ 0.08
PCDHGC3-204ENST00000617222 CCDC25Q86WR0 208 aa15.55■□□□□ 0.08
PCDHGC3-204ENST00000617222 C1orf216Q8TAB5 229 aa15.55■□□□□ 0.08
PCDHGC3-204ENST00000617222 HDAC10Q969S8 669 aa15.55■□□□□ 0.08
PCDHGC3-204ENST00000617222 MFSD3Q96ES6 412 aa15.55■□□□□ 0.08
PCDHGC3-204ENST00000617222 EBNA1BP2Q99848 306 aaKnown RBP15.55■□□□□ 0.08
PCDHGC3-204ENST00000617222 TRIM56Q9BRZ2 755 aaKnown RBP15.55■□□□□ 0.08
PCDHGC3-204ENST00000617222 CDH19Q9H159 772 aa15.55■□□□□ 0.08
PCDHGC3-204ENST00000617222 SUDS3Q9H7L9 328 aaPredicted RBP15.55■□□□□ 0.08
PCDHGC3-204ENST00000617222 ANKZF1Q9H8Y5 726 aa15.55■□□□□ 0.08
PCDHGC3-204ENST00000617222 TM9SF3Q9HD45 589 aa15.55■□□□□ 0.08
PCDHGC3-204ENST00000617222 SAYSD1Q9NPB0 183 aa15.55■□□□□ 0.08
PCDHGC3-204ENST00000617222 TMEM74BQ9NUR3 256 aa15.55■□□□□ 0.08
PCDHGC3-204ENST00000617222 MTRF1LQ9UGC7 380 aaKnown RBP15.55■□□□□ 0.08
PCDHGC3-204ENST00000617222 PILRBQ9UKJ0 227 aa15.55■□□□□ 0.08
PCDHGC3-204ENST00000617222 NFU1Q9UMS0 254 aa15.55■□□□□ 0.08
PCDHGC3-204ENST00000617222 SMG5Q9UPR3 1016 aaKnown RBP15.55■□□□□ 0.08
PCDHGC3-204ENST00000617222 HCN4Q9Y3Q4 1203 aa15.55■□□□□ 0.08
PCDHGC3-204ENST00000617222 PLXND1Q9Y4D7 1925 aa15.55■□□□□ 0.08
PCDHGC3-204ENST00000617222 GLYATL1P3A0A0U1RQE8 302 aa15.54■□□□□ 0.08
PCDHGC3-204ENST00000617222 E7ESA3 106 aa15.54■□□□□ 0.08
PCDHGC3-204ENST00000617222 H0Y8X5 98 aa15.54■□□□□ 0.08
PCDHGC3-204ENST00000617222 BCAT2O15382 392 aaPredicted RBP15.54■□□□□ 0.08
PCDHGC3-204ENST00000617222 PSMA3P25788 255 aa15.54■□□□□ 0.08
PCDHGC3-204ENST00000617222 DCDC1P59894 354 aa15.54■□□□□ 0.08
PCDHGC3-204ENST00000617222 RACK1P63244 317 aaKnown RBP15.54■□□□□ 0.08
PCDHGC3-204ENST00000617222 XIAPP98170 497 aa15.54■□□□□ 0.08
PCDHGC3-204ENST00000617222 ERCC6LQ2NKX8 1250 aa15.54■□□□□ 0.08
PCDHGC3-204ENST00000617222 ANKRD20A4Q4UJ75 823 aa15.54■□□□□ 0.08
PCDHGC3-204ENST00000617222 ARMC3Q5W041 872 aa15.54■□□□□ 0.08
PCDHGC3-204ENST00000617222 GCNT7Q6ZNI0 430 aa15.54■□□□□ 0.08
PCDHGC3-204ENST00000617222 SYT12Q8IV01 421 aa15.54■□□□□ 0.08
PCDHGC3-204ENST00000617222 ANKMY2Q8IV38 441 aa15.54■□□□□ 0.08
PCDHGC3-204ENST00000617222 TRAM1L1Q8N609 369 aa15.54■□□□□ 0.08
PCDHGC3-204ENST00000617222 OR13J1Q8NGT2 312 aa15.54■□□□□ 0.08
PCDHGC3-204ENST00000617222 PEX13Q92968 403 aa15.54■□□□□ 0.08
PCDHGC3-204ENST00000617222 LRRC39Q96DD0 335 aa15.54■□□□□ 0.08
PCDHGC3-204ENST00000617222 LOXL4Q96JB6 756 aa15.54■□□□□ 0.08
PCDHGC3-204ENST00000617222 FCRL3Q96P31 734 aaPredicted RBP15.54■□□□□ 0.08
PCDHGC3-204ENST00000617222 PLEKHG4BQ96PX9 1271 aa15.54■□□□□ 0.08
PCDHGC3-204ENST00000617222 C19orf43Q9BQ61 176 aa15.54■□□□□ 0.08
PCDHGC3-204ENST00000617222 FAM129AQ9BZQ8 928 aa15.54■□□□□ 0.08
PCDHGC3-204ENST00000617222 FOXP3Q9BZS1 431 aa15.54■□□□□ 0.08
PCDHGC3-204ENST00000617222 TREX1Q9NSU2 369 aa15.54■□□□□ 0.08
PCDHGC3-204ENST00000617222 NFKBIL1Q9UBC1 381 aaPredicted RBP15.54■□□□□ 0.08
PCDHGC3-204ENST00000617222 APPL1Q9UKG1 709 aa15.54■□□□□ 0.08
PCDHGC3-204ENST00000617222 CHMP2BQ9UQN3 213 aa15.54■□□□□ 0.08
PCDHGC3-204ENST00000617222 TEX264Q9Y6I9 313 aa15.54■□□□□ 0.08
PCDHGC3-204ENST00000617222 RPS6KL1Q9Y6S9 549 aa15.54■□□□□ 0.08
PCDHGC3-204ENST00000617222 THADAQ6YHU6 1953 aa15.53■□□□□ 0.08
PCDHGC3-204ENST00000617222 CCDC162PA2VCL2 907 aa15.53■□□□□ 0.08
PCDHGC3-204ENST00000617222 FADS2P1A8MWK0 482 aa15.53■□□□□ 0.08
PCDHGC3-204ENST00000617222 GAPDHSO14556 408 aaPredicted RBP15.53■□□□□ 0.08
PCDHGC3-204ENST00000617222 EIF3HO15372 352 aaKnown RBP eCLIP15.53■□□□□ 0.08
PCDHGC3-204ENST00000617222 UGT1A9O60656 530 aa15.53■□□□□ 0.08
PCDHGC3-204ENST00000617222 SRP72O76094 671 aaKnown RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms