RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 GRIA4P48058 902 aa7.78□□□□□ -1.16
NEK3-207ENST00000617054 SLC6A11P48066 632 aa7.78□□□□□ -1.16
NEK3-207ENST00000617054 CSRP3P50461 194 aa7.78□□□□□ -1.16
NEK3-207ENST00000617054 CCNHP51946 323 aaPredicted RBP7.78□□□□□ -1.16
NEK3-207ENST00000617054 KCNJ2P63252 427 aa7.78□□□□□ -1.16
NEK3-207ENST00000617054 UBE3AQ05086 875 aa7.78□□□□□ -1.16
NEK3-207ENST00000617054 CCDC153Q494R4 210 aa7.78□□□□□ -1.16
NEK3-207ENST00000617054 FAM78AQ5JUQ0 283 aa7.78□□□□□ -1.16
NEK3-207ENST00000617054 ZNF783Q6ZMS7 281 aa7.78□□□□□ -1.16
NEK3-207ENST00000617054 MAVSQ7Z434 540 aa7.78□□□□□ -1.16
NEK3-207ENST00000617054 SPATS2Q86XZ4 545 aaKnown RBP7.78□□□□□ -1.16
NEK3-207ENST00000617054 OR2AP1Q8NGE2 309 aa7.78□□□□□ -1.16
NEK3-207ENST00000617054 FGF13Q92913 245 aa7.78□□□□□ -1.16
NEK3-207ENST00000617054 BOCQ9BWV1 1114 aa7.78□□□□□ -1.16
NEK3-207ENST00000617054 THAP1Q9NVV9 213 aa7.78□□□□□ -1.16
NEK3-207ENST00000617054 DUS2Q9NX74 493 aaKnown RBP7.78□□□□□ -1.16
NEK3-207ENST00000617054 NPIPB15A6NHN6 443 aaPredicted RBP7.77□□□□□ -1.16
NEK3-207ENST00000617054 LRRC14BA6NHZ5 514 aa7.77□□□□□ -1.16
NEK3-207ENST00000617054 NCF1BA6NI72 391 aaPredicted RBP7.77□□□□□ -1.16
NEK3-207ENST00000617054 NCF1CA8MVU1 366 aaPredicted RBP7.77□□□□□ -1.16
NEK3-207ENST00000617054 H3BMM5 538 aa7.77□□□□□ -1.16
NEK3-207ENST00000617054 GALR2O43603 387 aaPredicted RBP7.77□□□□□ -1.16
NEK3-207ENST00000617054 NIPSNAP2O75323 286 aa7.77□□□□□ -1.16
NEK3-207ENST00000617054 KLHL2O95198 593 aa7.77□□□□□ -1.16
NEK3-207ENST00000617054 NCF1P14598 390 aaPredicted RBP7.77□□□□□ -1.16
NEK3-207ENST00000617054 CPA2P48052 419 aa7.77□□□□□ -1.16
NEK3-207ENST00000617054 STC1P52823 247 aa7.77□□□□□ -1.16
NEK3-207ENST00000617054 METAP1P53582 386 aa7.77□□□□□ -1.16
NEK3-207ENST00000617054 ALDH18A1P54886 795 aaKnown RBP7.77□□□□□ -1.16
NEK3-207ENST00000617054 ECT2LQ008S8 904 aa7.77□□□□□ -1.16
NEK3-207ENST00000617054 POU4F1Q01851 419 aa7.77□□□□□ -1.16
NEK3-207ENST00000617054 ACTN3Q08043 901 aaPredicted RBP7.77□□□□□ -1.16
NEK3-207ENST00000617054 DHCR24Q15392 516 aa7.77□□□□□ -1.16
NEK3-207ENST00000617054 PTPRNQ16849 979 aa7.77□□□□□ -1.16
NEK3-207ENST00000617054 INSCQ1MX18 579 aa7.77□□□□□ -1.16
NEK3-207ENST00000617054 RNF43Q68DV7 783 aa7.77□□□□□ -1.16
NEK3-207ENST00000617054 MRNIPQ6NTE8 343 aa7.77□□□□□ -1.16
NEK3-207ENST00000617054 PAQR3Q6TCH7 311 aa7.77□□□□□ -1.16
NEK3-207ENST00000617054 YTHDF3Q7Z739 585 aaKnown RBP7.77□□□□□ -1.16
NEK3-207ENST00000617054 TTC30BQ8N4P2 665 aa7.77□□□□□ -1.16
NEK3-207ENST00000617054 TXNDC5Q8NBS9 432 aaKnown RBP7.77□□□□□ -1.16
NEK3-207ENST00000617054 PPP4R1Q8TF05 950 aa7.77□□□□□ -1.16
NEK3-207ENST00000617054 TSNARE1Q96NA8 513 aa7.77□□□□□ -1.16
NEK3-207ENST00000617054 OSBPL1AQ9BXW6 950 aa7.77□□□□□ -1.16
NEK3-207ENST00000617054 NMUR2Q9GZQ4 415 aa7.77□□□□□ -1.16
NEK3-207ENST00000617054 IKZF3Q9UKT9 509 aa7.77□□□□□ -1.16
NEK3-207ENST00000617054 RWDD3Q9Y3V2 267 aa7.77□□□□□ -1.16
NEK3-207ENST00000617054 ZNF711Q9Y462 761 aa7.77□□□□□ -1.16
NEK3-207ENST00000617054 GOLGA8QA0A0J9YX86 632 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 GOLGA8OA6NCC3 632 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 GOLGA8NF8WBI6 632 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 KLF11O14901 512 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 NDUFS3O75489 264 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 SRP72O76094 671 aaKnown RBP7.77□□□□□ -1.17
NEK3-207ENST00000617054 SERPINE1P05121 402 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 JUNP05412 331 aaKnown RBP7.77□□□□□ -1.17
NEK3-207ENST00000617054 RB1P06400 928 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 T-ENOLP0DO92 83 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 HLA-EP13747 358 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 MPSTP25325 297 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 ABCE1P61221 599 aaKnown RBP7.77□□□□□ -1.17
NEK3-207ENST00000617054 ERVK-21P61565 698 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 ACVR1Q04771 509 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 MYLK3Q32MK0 819 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 GALNTL6Q49A17 601 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 MPP7Q5T2T1 576 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 SDCCAG8Q86SQ7 713 aaPredicted RBP7.77□□□□□ -1.17
NEK3-207ENST00000617054 CACUL1Q86Y37 369 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 SIDT2Q8NBJ9 832 aaKnown RBP7.77□□□□□ -1.17
NEK3-207ENST00000617054 ESAMQ96AP7 390 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 PTERQ96BW5 349 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 ZFYVE1Q9HBF4 777 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 OXSMQ9NWU1 459 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 ZFP69BQ9UJL9 534 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 STK38LQ9Y2H1 464 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 MED16Q9Y2X0 877 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 PPP6CO00743 305 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 NEMP1O14524 444 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 TRIM13O60858 407 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 DIAPH2O60879 1101 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 HSPA4LO95757 839 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 PENKP01210 267 aaPredicted RBP7.77□□□□□ -1.17
NEK3-207ENST00000617054 TFEBP19484 476 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 UBAP2LQ14157 1087 aaKnown RBP7.77□□□□□ -1.17
NEK3-207ENST00000617054 SETDB1Q15047 1291 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 SETMARQ53H47 684 aaPredicted RBP7.77□□□□□ -1.17
NEK3-207ENST00000617054 ARL13AQ5H913 290 aaPredicted RBP7.77□□□□□ -1.17
NEK3-207ENST00000617054 C22orf39Q6P5X5 142 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 CLNKQ7Z7G1 428 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 NPAS3Q8IXF0 933 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 PIWIL2Q8TC59 973 aaKnown RBP7.77□□□□□ -1.17
NEK3-207ENST00000617054 MAPK15Q8TD08 544 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 C7orf26Q96N11 449 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 KLHL32Q96NJ5 620 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 BIRC8Q96P09 236 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 GPR21Q99679 349 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 POMKQ9H5K3 350 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 RETREG1Q9H6L5 497 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 SLC28A3Q9HAS3 691 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 TNFRSF12AQ9NP84 129 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms