RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 RCBTB1Q8NDN9 531 aa20.71■□□□□ 0.91
TRAPPC3-208ENST00000616074 SEMA3CQ99985 751 aa20.71■□□□□ 0.91
TRAPPC3-208ENST00000616074 SEPT10Q9P0V9 454 aa20.71■□□□□ 0.91
TRAPPC3-208ENST00000616074 ANAPC7Q9UJX3 599 aa20.71■□□□□ 0.91
TRAPPC3-208ENST00000616074 PLEKHM1Q9Y4G2 1056 aa20.71■□□□□ 0.91
TRAPPC3-208ENST00000616074 SDK2Q58EX2 2172 aa20.7■□□□□ 0.91
TRAPPC3-208ENST00000616074 MFSD11O43934 449 aa20.7■□□□□ 0.9
TRAPPC3-208ENST00000616074 SERPINC1P01008 464 aa20.7■□□□□ 0.9
TRAPPC3-208ENST00000616074 CD48P09326 243 aa20.7■□□□□ 0.9
TRAPPC3-208ENST00000616074 CCL4P13236 92 aa20.7■□□□□ 0.9
TRAPPC3-208ENST00000616074 GPR1P46091 355 aa20.7■□□□□ 0.9
TRAPPC3-208ENST00000616074 MMRN1Q13201 1228 aa20.7■□□□□ 0.9
TRAPPC3-208ENST00000616074 IQCB1Q15051 598 aa20.7■□□□□ 0.9
TRAPPC3-208ENST00000616074 MANEAQ5SRI9 462 aa20.7■□□□□ 0.9
TRAPPC3-208ENST00000616074 LRRC66Q68CR7 880 aa20.7■□□□□ 0.9
TRAPPC3-208ENST00000616074 DTX1Q86Y01 620 aa20.7■□□□□ 0.9
TRAPPC3-208ENST00000616074 SCARF2Q96GP6 870 aaPredicted RBP20.7■□□□□ 0.9
TRAPPC3-208ENST00000616074 NUP85Q9BW27 656 aa20.7■□□□□ 0.9
TRAPPC3-208ENST00000616074 ABCG8Q9H221 673 aa20.7■□□□□ 0.9
TRAPPC3-208ENST00000616074 IP6K2Q9UHH9 426 aa20.7■□□□□ 0.9
TRAPPC3-208ENST00000616074 IGHV5-10-1A0A0J9YXX1 117 aa20.69■□□□□ 0.9
TRAPPC3-208ENST00000616074 PYCARD-AS1I3L0S3 204 aa20.69■□□□□ 0.9
TRAPPC3-208ENST00000616074 PPM1DO15297 605 aa20.69■□□□□ 0.9
TRAPPC3-208ENST00000616074 CD1CP29017 333 aa20.69■□□□□ 0.9
TRAPPC3-208ENST00000616074 ACTR1BP42025 376 aa20.69■□□□□ 0.9
TRAPPC3-208ENST00000616074 ACTR1AP61163 376 aa20.69■□□□□ 0.9
TRAPPC3-208ENST00000616074 ITKQ08881 620 aa20.69■□□□□ 0.9
TRAPPC3-208ENST00000616074 BIRC2Q13490 618 aa20.69■□□□□ 0.9
TRAPPC3-208ENST00000616074 IHHQ14623 411 aa20.69■□□□□ 0.9
TRAPPC3-208ENST00000616074 CLPPQ16740 277 aaPredicted RBP20.69■□□□□ 0.9
TRAPPC3-208ENST00000616074 ADAMTSL4Q6UY14 1074 aa20.69■□□□□ 0.9
TRAPPC3-208ENST00000616074 TRIM74Q86UV6 250 aa20.69■□□□□ 0.9
TRAPPC3-208ENST00000616074 EXTL1Q92935 676 aa20.69■□□□□ 0.9
TRAPPC3-208ENST00000616074 SCAMP4Q969E2 229 aa20.69■□□□□ 0.9
TRAPPC3-208ENST00000616074 AP2M1Q96CW1 435 aa20.69■□□□□ 0.9
TRAPPC3-208ENST00000616074 CCDC74BQ96LY2 380 aa20.69■□□□□ 0.9
TRAPPC3-208ENST00000616074 POLR1EQ9GZS1 481 aaKnown RBP20.69■□□□□ 0.9
TRAPPC3-208ENST00000616074 CDH19Q9H159 772 aa20.69■□□□□ 0.9
TRAPPC3-208ENST00000616074 AKAP7Q9P0M2 348 aaPredicted RBP20.69■□□□□ 0.9
TRAPPC3-208ENST00000616074 RCOR3Q9P2K3 495 aaPredicted RBP20.69■□□□□ 0.9
TRAPPC3-208ENST00000616074 TMEM98Q9Y2Y6 226 aa20.69■□□□□ 0.9
TRAPPC3-208ENST00000616074 PCDHGA4Q9Y5G9 962 aa20.69■□□□□ 0.9
TRAPPC3-208ENST00000616074 A0A0J9YYE9 177 aa20.68■□□□□ 0.9
TRAPPC3-208ENST00000616074 HGSO14964 777 aaPredicted RBP20.68■□□□□ 0.9
TRAPPC3-208ENST00000616074 ZW10O43264 779 aa20.68■□□□□ 0.9
TRAPPC3-208ENST00000616074 TRBC1P01850 177 aa20.68■□□□□ 0.9
TRAPPC3-208ENST00000616074 WT1P19544 449 aaPredicted RBP20.68■□□□□ 0.9
TRAPPC3-208ENST00000616074 CD82P27701 267 aa20.68■□□□□ 0.9
TRAPPC3-208ENST00000616074 GARSP41250 739 aaKnown RBP20.68■□□□□ 0.9
TRAPPC3-208ENST00000616074 GPR3P46089 330 aa20.68■□□□□ 0.9
TRAPPC3-208ENST00000616074 PTSQ03393 145 aa20.68■□□□□ 0.9
TRAPPC3-208ENST00000616074 NKAIN2Q5VXU1 208 aa20.68■□□□□ 0.9
TRAPPC3-208ENST00000616074 NCBP2-AS2Q69YL0 99 aa20.68■□□□□ 0.9
TRAPPC3-208ENST00000616074 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.68■□□□□ 0.9
TRAPPC3-208ENST00000616074 FAM71BQ8TC56 605 aa20.68■□□□□ 0.9
TRAPPC3-208ENST00000616074 OR2M4Q96R27 311 aa20.68■□□□□ 0.9
TRAPPC3-208ENST00000616074 AGAP2Q99490 1192 aa20.68■□□□□ 0.9
TRAPPC3-208ENST00000616074 PCDHB11Q9Y5F2 797 aa20.68■□□□□ 0.9
TRAPPC3-208ENST00000616074 BZW2Q9Y6E2 419 aaKnown RBP20.68■□□□□ 0.9
TRAPPC3-208ENST00000616074 MYO18BQ8IUG5 2567 aa20.68■□□□□ 0.9
TRAPPC3-208ENST00000616074 A0A1W2PQJ5 194 aa20.67■□□□□ 0.9
TRAPPC3-208ENST00000616074 SLC28A2O43868 658 aa20.67■□□□□ 0.9
TRAPPC3-208ENST00000616074 MAP3K6O95382 1288 aa20.67■□□□□ 0.9
TRAPPC3-208ENST00000616074 ITGB2P05107 769 aa20.67■□□□□ 0.9
TRAPPC3-208ENST00000616074 CYP1A2P05177 515 aa20.67■□□□□ 0.9
TRAPPC3-208ENST00000616074 SSR1P43307 286 aaKnown RBP20.67■□□□□ 0.9
TRAPPC3-208ENST00000616074 ARSEP51690 589 aa20.67■□□□□ 0.9
TRAPPC3-208ENST00000616074 DSC2Q02487 901 aa20.67■□□□□ 0.9
TRAPPC3-208ENST00000616074 GALNT2Q10471 571 aa20.67■□□□□ 0.9
TRAPPC3-208ENST00000616074 PEX6Q13608 980 aa20.67■□□□□ 0.9
TRAPPC3-208ENST00000616074 DPYSL3Q14195 570 aa20.67■□□□□ 0.9
TRAPPC3-208ENST00000616074 TMEM164Q5U3C3 297 aa20.67■□□□□ 0.9
TRAPPC3-208ENST00000616074 CAVIN1Q6NZI2 390 aaKnown RBP20.67■□□□□ 0.9
TRAPPC3-208ENST00000616074 MARK2Q7KZI7 788 aaKnown RBP20.67■□□□□ 0.9
TRAPPC3-208ENST00000616074 LRRC49Q8IUZ0 686 aa20.67■□□□□ 0.9
TRAPPC3-208ENST00000616074 NDUFAF2Q8N183 169 aa20.67■□□□□ 0.9
TRAPPC3-208ENST00000616074 MAML1Q92585 1016 aa20.67■□□□□ 0.9
TRAPPC3-208ENST00000616074 SYN2Q92777 582 aaPredicted RBP20.67■□□□□ 0.9
TRAPPC3-208ENST00000616074 PMEPA1Q969W9 287 aa20.67■□□□□ 0.9
TRAPPC3-208ENST00000616074 FUCA2Q9BTY2 467 aa20.67■□□□□ 0.9
TRAPPC3-208ENST00000616074 B3GNT4Q9C0J1 378 aa20.67■□□□□ 0.9
TRAPPC3-208ENST00000616074 IGHV1OR21-1A0A087WYE8 117 aa20.66■□□□□ 0.9
TRAPPC3-208ENST00000616074 A0A087X0T9 212 aa20.66■□□□□ 0.9
TRAPPC3-208ENST00000616074 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.66■□□□□ 0.9
TRAPPC3-208ENST00000616074 FAM228BP0C875 321 aa20.66■□□□□ 0.9
TRAPPC3-208ENST00000616074 FGF3P11487 239 aaPredicted RBP20.66■□□□□ 0.9
TRAPPC3-208ENST00000616074 ZNF30P17039 623 aa20.66■□□□□ 0.9
TRAPPC3-208ENST00000616074 CSF2RBP32927 897 aa20.66■□□□□ 0.9
TRAPPC3-208ENST00000616074 PBX1P40424 430 aa20.66■□□□□ 0.9
TRAPPC3-208ENST00000616074 ARSDP51689 593 aa20.66■□□□□ 0.9
TRAPPC3-208ENST00000616074 LIMK2P53671 638 aa20.66■□□□□ 0.9
TRAPPC3-208ENST00000616074 EPHB1P54762 984 aa20.66■□□□□ 0.9
TRAPPC3-208ENST00000616074 NFATC3Q12968 1075 aa20.66■□□□□ 0.9
TRAPPC3-208ENST00000616074 PAFAH1B3Q15102 231 aaKnown RBP20.66■□□□□ 0.9
TRAPPC3-208ENST00000616074 ATP13A4Q4VNC1 1196 aa20.66■□□□□ 0.9
TRAPPC3-208ENST00000616074 PYCR3Q53H96 274 aa20.66■□□□□ 0.9
TRAPPC3-208ENST00000616074 ALG1LQ6GMV1 187 aa20.66■□□□□ 0.9
TRAPPC3-208ENST00000616074 ZNF765Q7L2R6 523 aa20.66■□□□□ 0.9
TRAPPC3-208ENST00000616074 CPNE8Q86YQ8 564 aa20.66■□□□□ 0.9
TRAPPC3-208ENST00000616074 OR4D9Q8NGE8 314 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms