RNA–Protein interactions for RNA: ENST00000615393.5

VEGFA-227, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 984 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-227ENST00000615393 C1orf232A0A0U1RR37 186 aa25.11■■□□□ 1.61
VEGFA-227ENST00000615393 ANKRD66B4E2M5 251 aa25.11■■□□□ 1.61
VEGFA-227ENST00000615393 NOBOXO60393 691 aa25.11■■□□□ 1.61
VEGFA-227ENST00000615393 CLDN7O95471 211 aa25.11■■□□□ 1.61
VEGFA-227ENST00000615393 SOD1P00441 154 aa25.11■■□□□ 1.61
VEGFA-227ENST00000615393 PNLIPP16233 465 aa25.11■■□□□ 1.61
VEGFA-227ENST00000615393 NR2C2P49116 596 aa25.11■■□□□ 1.61
VEGFA-227ENST00000615393 ERVPABLB-1P60509 514 aa25.11■■□□□ 1.61
VEGFA-227ENST00000615393 PEX6Q13608 980 aa25.11■■□□□ 1.61
VEGFA-227ENST00000615393 QPCTQ16769 361 aa25.11■■□□□ 1.61
VEGFA-227ENST00000615393 C3orf38Q5JPI3 329 aa25.11■■□□□ 1.61
VEGFA-227ENST00000615393 CERCAMQ5T4B2 595 aa25.11■■□□□ 1.61
VEGFA-227ENST00000615393 NT5DC3Q86UY8 548 aa25.11■■□□□ 1.61
VEGFA-227ENST00000615393 CCHCR1Q8TD31 782 aa25.11■■□□□ 1.61
VEGFA-227ENST00000615393 SCAMP4Q969E2 229 aa25.11■■□□□ 1.61
VEGFA-227ENST00000615393 AGAP3Q96P47 875 aa25.11■■□□□ 1.61
VEGFA-227ENST00000615393 APPL1Q9UKG1 709 aa25.11■■□□□ 1.61
VEGFA-227ENST00000615393 PCDHA13Q9Y5I0 950 aa25.11■■□□□ 1.61
VEGFA-227ENST00000615393 ALG6Q9Y672 507 aa25.11■■□□□ 1.61
VEGFA-227ENST00000615393 CELSR3Q9NYQ7 3312 aa25.11■■□□□ 1.61
VEGFA-227ENST00000615393 FUCA1P04066 466 aa25.1■■□□□ 1.61
VEGFA-227ENST00000615393 RPLP0P05388 317 aaKnown RBP25.1■■□□□ 1.61
VEGFA-227ENST00000615393 CDKN2BP42772 138 aa25.1■■□□□ 1.61
VEGFA-227ENST00000615393 PCBP4P57723 403 aaKnown RBP25.1■■□□□ 1.61
VEGFA-227ENST00000615393 CCL7P80098 99 aa25.1■■□□□ 1.61
VEGFA-227ENST00000615393 HLTFQ14527 1009 aaKnown RBP eCLIP25.1■■□□□ 1.616e-8■■□□□ 12.7
VEGFA-227ENST00000615393 DOK6Q6PKX4 331 aa25.1■■□□□ 1.61
VEGFA-227ENST00000615393 IGF2-ASQ6U949 168 aa25.1■■□□□ 1.61
VEGFA-227ENST00000615393 CCNJLQ8IV13 435 aa25.1■■□□□ 1.61
VEGFA-227ENST00000615393 HIC2Q96JB3 615 aa25.1■■□□□ 1.61
VEGFA-227ENST00000615393 CEP41Q9BYV8 373 aa25.1■■□□□ 1.61
VEGFA-227ENST00000615393 CDH19Q9H159 772 aa25.1■■□□□ 1.61
VEGFA-227ENST00000615393 LRRN3Q9H3W5 708 aa25.1■■□□□ 1.61
VEGFA-227ENST00000615393 THSD1Q9NS62 852 aa25.1■■□□□ 1.61
VEGFA-227ENST00000615393 PKD2L2Q9NZM6 624 aa25.1■■□□□ 1.61
VEGFA-227ENST00000615393 URB1O60287 2271 aaKnown RBP25.1■■□□□ 1.61
VEGFA-227ENST00000615393 CHD6Q8TD26 2715 aa25.09■■□□□ 1.61
VEGFA-227ENST00000615393 COL27A1Q8IZC6 1860 aaPredicted RBP25.09■■□□□ 1.61
VEGFA-227ENST00000615393 A0A0A6YYK5 440 aaPredicted RBP25.09■■□□□ 1.61
VEGFA-227ENST00000615393 TMX2-CTNND1H3BSU7 103 aa25.09■■□□□ 1.61
VEGFA-227ENST00000615393 CASC3O15234 703 aaKnown RBP25.09■■□□□ 1.61
VEGFA-227ENST00000615393 NUDT21O43809 227 aaKnown RBP25.09■■□□□ 1.61
VEGFA-227ENST00000615393 RBMS1P29558 406 aaKnown RBP25.09■■□□□ 1.61
VEGFA-227ENST00000615393 POLD2P49005 469 aa25.09■■□□□ 1.61
VEGFA-227ENST00000615393 TAZQ16635 292 aa25.09■■□□□ 1.61
VEGFA-227ENST00000615393 NRROSQ86YC3 692 aa25.09■■□□□ 1.61
VEGFA-227ENST00000615393 ZNF248Q8NDW4 579 aa25.09■■□□□ 1.61
VEGFA-227ENST00000615393 EXD1Q8NHP7 514 aa25.09■■□□□ 1.61
VEGFA-227ENST00000615393 WDR36Q8NI36 951 aaKnown RBP25.09■■□□□ 1.61
VEGFA-227ENST00000615393 IMP4Q96G21 291 aaKnown RBP25.09■■□□□ 1.61
VEGFA-227ENST00000615393 MRFAP1L1Q96HT8 127 aa25.09■■□□□ 1.61
VEGFA-227ENST00000615393 RIOK2Q9BVS4 552 aaKnown RBP25.09■■□□□ 1.61
VEGFA-227ENST00000615393 SLC25A51Q9H1U9 297 aa25.09■■□□□ 1.61
VEGFA-227ENST00000615393 LRIT1Q9P2V4 623 aa25.09■■□□□ 1.61
VEGFA-227ENST00000615393 PCDHGA8Q9Y5G5 932 aa25.09■■□□□ 1.61
VEGFA-227ENST00000615393 ASXL3Q9C0F0 2248 aa25.09■■□□□ 1.61
VEGFA-227ENST00000615393 CCDC187A0A096LP49 1063 aa25.08■■□□□ 1.61
VEGFA-227ENST00000615393 RGSL1A5PLK6 1076 aa25.08■■□□□ 1.61
VEGFA-227ENST00000615393 D6RAR5 112 aa25.08■■□□□ 1.61
VEGFA-227ENST00000615393 ITPKBP27987 946 aa25.08■■□□□ 1.61
VEGFA-227ENST00000615393 SPINT3P49223 89 aa25.08■■□□□ 1.61
VEGFA-227ENST00000615393 ZNF75DP51815 510 aa25.08■■□□□ 1.61
VEGFA-227ENST00000615393 PDX1P52945 283 aa25.08■■□□□ 1.61
VEGFA-227ENST00000615393 SLC14A2Q15849 920 aa25.08■■□□□ 1.61
VEGFA-227ENST00000615393 SPOCD1Q6ZMY3 1216 aa25.08■■□□□ 1.61
VEGFA-227ENST00000615393 ZDHHC1Q8WTX9 485 aa25.08■■□□□ 1.61
VEGFA-227ENST00000615393 SCARF2Q96GP6 870 aaPredicted RBP25.08■■□□□ 1.61
VEGFA-227ENST00000615393 PANX2Q96RD6 677 aa25.08■■□□□ 1.61
VEGFA-227ENST00000615393 AGAP2Q99490 1192 aa25.08■■□□□ 1.61
VEGFA-227ENST00000615393 SPATS2LQ9NUQ6 558 aaKnown RBP25.08■■□□□ 1.61
VEGFA-227ENST00000615393 TAAR2Q9P1P5 351 aa25.08■■□□□ 1.61
VEGFA-227ENST00000615393 SBDSQ9Y3A5 250 aaKnown RBP eCLIP25.08■■□□□ 1.61
VEGFA-227ENST00000615393 RNF215Q9Y6U7 377 aa25.08■■□□□ 1.61
VEGFA-227ENST00000615393 DSPP15924 2871 aaKnown RBP25.08■■□□□ 1.61
VEGFA-227ENST00000615393 A0A1W2PQM1 296 aa25.07■■□□□ 1.6
VEGFA-227ENST00000615393 CST8O60676 142 aa25.07■■□□□ 1.6
VEGFA-227ENST00000615393 ZRANB2O95218 330 aaKnown RBP eCLIP25.07■■□□□ 1.64e-17■■□□□ 11.4
VEGFA-227ENST00000615393 AK4P27144 223 aaPredicted RBP25.07■■□□□ 1.6
VEGFA-227ENST00000615393 ADCY8P40145 1251 aa25.07■■□□□ 1.6
VEGFA-227ENST00000615393 CTBSQ01459 385 aa25.07■■□□□ 1.6
VEGFA-227ENST00000615393 CCDC173Q0VFZ6 552 aa25.07■■□□□ 1.6
VEGFA-227ENST00000615393 GALNT3Q14435 633 aa25.07■■□□□ 1.6
VEGFA-227ENST00000615393 TEX44Q53QW1 395 aa25.07■■□□□ 1.6
VEGFA-227ENST00000615393 TFDP3Q5H9I0 405 aa25.07■■□□□ 1.6
VEGFA-227ENST00000615393 KAZNQ674X7 775 aa25.07■■□□□ 1.6
VEGFA-227ENST00000615393 C11orf63Q6NUN7 778 aa25.07■■□□□ 1.6
VEGFA-227ENST00000615393 SLC30A9Q6PML9 568 aa25.07■■□□□ 1.6
VEGFA-227ENST00000615393 TRIM74Q86UV6 250 aa25.07■■□□□ 1.6
VEGFA-227ENST00000615393 SFTPA2Q8IWL1 248 aa25.07■■□□□ 1.6
VEGFA-227ENST00000615393 KATNAL2Q8IYT4 538 aa25.07■■□□□ 1.6
VEGFA-227ENST00000615393 Q8N9G6 341 aaPredicted RBP25.07■■□□□ 1.6
VEGFA-227ENST00000615393 PTCD2Q8WV60 388 aaKnown RBP25.07■■□□□ 1.6
VEGFA-227ENST00000615393 TFB1MQ8WVM0 346 aaKnown RBP25.07■■□□□ 1.6
VEGFA-227ENST00000615393 LIN37Q96GY3 246 aaPredicted RBP25.07■■□□□ 1.6
VEGFA-227ENST00000615393 COX14Q96I36 57 aa25.07■■□□□ 1.6
VEGFA-227ENST00000615393 TMEM74Q96NL1 305 aa25.07■■□□□ 1.6
VEGFA-227ENST00000615393 OR2M4Q96R27 311 aa25.07■■□□□ 1.6
VEGFA-227ENST00000615393 STRADBQ9C0K7 418 aa25.07■■□□□ 1.6
VEGFA-227ENST00000615393 GOLPH3Q9H4A6 298 aa25.07■■□□□ 1.6
VEGFA-227ENST00000615393 ASCL3Q9NQ33 180 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms