RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 DDHD1Q8NEL9 900 aa11.21□□□□□ -0.62
ATF3-211ENST00000613954 CALML6Q8TD86 181 aa11.21□□□□□ -0.62
ATF3-211ENST00000613954 GIPC3Q8TF64 312 aa11.21□□□□□ -0.62
ATF3-211ENST00000613954 NDRG1Q92597 394 aaKnown RBP11.21□□□□□ -0.62
ATF3-211ENST00000613954 DPF3Q92784 378 aa11.21□□□□□ -0.62
ATF3-211ENST00000613954 CENPNQ96H22 339 aaPredicted RBP11.21□□□□□ -0.62
ATF3-211ENST00000613954 SCLYQ96I15 445 aa11.21□□□□□ -0.62
ATF3-211ENST00000613954 COX4I2Q96KJ9 171 aa11.21□□□□□ -0.62
ATF3-211ENST00000613954 FCRL5Q96RD9 977 aa11.21□□□□□ -0.62
ATF3-211ENST00000613954 TMEM209Q96SK2 561 aa11.21□□□□□ -0.62
ATF3-211ENST00000613954 TUBA1CQ9BQE3 449 aa11.21□□□□□ -0.62
ATF3-211ENST00000613954 NPLQ9BXD5 320 aaPredicted RBP11.21□□□□□ -0.62
ATF3-211ENST00000613954 CCDC68Q9H2F9 335 aa11.21□□□□□ -0.62
ATF3-211ENST00000613954 IGSF5Q9NSI5 407 aa11.21□□□□□ -0.62
ATF3-211ENST00000613954 TMEM30AQ9NV96 361 aa11.21□□□□□ -0.62
ATF3-211ENST00000613954 TMLHEQ9NVH6 421 aa11.21□□□□□ -0.62
ATF3-211ENST00000613954 UBP1Q9NZI7 540 aa11.21□□□□□ -0.62
ATF3-211ENST00000613954 TCAF1Q9Y4C2 921 aa11.21□□□□□ -0.62
ATF3-211ENST00000613954 TRAF6Q9Y4K3 522 aa11.21□□□□□ -0.62
ATF3-211ENST00000613954 SAC3D1A6NKF1 404 aa11.2□□□□□ -0.62
ATF3-211ENST00000613954 OAZ2O95190 189 aa11.2□□□□□ -0.62
ATF3-211ENST00000613954 GPIP06744 558 aa11.2□□□□□ -0.62
ATF3-211ENST00000613954 LTA4HP09960 611 aaKnown RBP11.2□□□□□ -0.62
ATF3-211ENST00000613954 BDNFP23560 247 aa11.2□□□□□ -0.62
ATF3-211ENST00000613954 SLC1A2P43004 574 aa11.2□□□□□ -0.62
ATF3-211ENST00000613954 GEMP55040 296 aa11.2□□□□□ -0.62
ATF3-211ENST00000613954 TLE2Q04725 743 aa11.2□□□□□ -0.62
ATF3-211ENST00000613954 CBX3Q13185 183 aa11.2□□□□□ -0.62
ATF3-211ENST00000613954 CSHL1Q14406 222 aa11.2□□□□□ -0.62
ATF3-211ENST00000613954 ATP6AP1Q15904 470 aa11.2□□□□□ -0.62
ATF3-211ENST00000613954 C1orf53Q5VUE5 145 aa11.2□□□□□ -0.62
ATF3-211ENST00000613954 ELMSAN1Q6PJG2 1045 aa11.2□□□□□ -0.62
ATF3-211ENST00000613954 LARP4Q71RC2 724 aaKnown RBP eCLIP11.2□□□□□ -0.62
ATF3-211ENST00000613954 GPRIN1Q7Z2K8 1008 aa11.2□□□□□ -0.62
ATF3-211ENST00000613954 LRRTM3Q86VH5 581 aa11.2□□□□□ -0.62
ATF3-211ENST00000613954 MFSD6LQ8IWD5 586 aa11.2□□□□□ -0.62
ATF3-211ENST00000613954 MINDY1Q8N5J2 469 aa11.2□□□□□ -0.62
ATF3-211ENST00000613954 ASB2Q96Q27 587 aa11.2□□□□□ -0.62
ATF3-211ENST00000613954 GPATCH1Q9BRR8 931 aaKnown RBP11.2□□□□□ -0.62
ATF3-211ENST00000613954 MRPL9Q9BYD2 267 aaKnown RBP11.2□□□□□ -0.62
ATF3-211ENST00000613954 ENTPD7Q9NQZ7 604 aa11.2□□□□□ -0.62
ATF3-211ENST00000613954 ARHGEF38Q9NXL2 777 aa11.2□□□□□ -0.62
ATF3-211ENST00000613954 ACTR3BQ9P1U1 418 aa11.2□□□□□ -0.62
ATF3-211ENST00000613954 SHROOM3Q8TF72 1996 aa11.2□□□□□ -0.62
ATF3-211ENST00000613954 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.19□□□□□ -0.62
ATF3-211ENST00000613954 KANSL1LA0AUZ9 987 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 NRP1O14786 923 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 SYN3O14994 580 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 RASAL1O95294 804 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 IMPDH1P20839 514 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 ATP6V1B2P21281 511 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 CCNCP24863 283 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 SLC26A3P40879 764 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 CLCN5P51795 746 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 PGGT1BP53609 377 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 RABGGTBP53611 331 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 CCL23P55773 120 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 FOXM1Q08050 763 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 ILF2Q12905 390 aaKnown RBP11.19□□□□□ -0.62
ATF3-211ENST00000613954 POU6F1Q14863 301 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 TRIM60Q495X7 471 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 PDCD4Q53EL6 469 aaKnown RBP11.19□□□□□ -0.62
ATF3-211ENST00000613954 COQ5Q5HYK3 327 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 ZNF470Q6ECI4 717 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 ESRP1Q6NXG1 681 aaKnown RBP11.19□□□□□ -0.62
ATF3-211ENST00000613954 LAYNQ6UX15 382 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 LYSMD3Q7Z3D4 306 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 SPRED1Q7Z699 444 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 NPAS4Q8IUM7 802 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 SPATA2LQ8IUW3 424 aaPredicted RBP11.19□□□□□ -0.62
ATF3-211ENST00000613954 DCP1BQ8IZD4 617 aaKnown RBP11.19□□□□□ -0.62
ATF3-211ENST00000613954 CRIPAKQ8N1N5 446 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 SCML4Q8N228 414 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 SPATA6LQ8N4H0 392 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 DCUN1D5Q9BTE7 237 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 COLEC11Q9BWP8 271 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 RPF2Q9H7B2 306 aaKnown RBP11.19□□□□□ -0.62
ATF3-211ENST00000613954 GID8Q9NWU2 228 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 FBXO5Q9UKT4 447 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 AURKCQ9UQB9 309 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 HEMK1Q9Y5R4 338 aaPredicted RBP11.19□□□□□ -0.62
ATF3-211ENST00000613954 CCDC78A2IDD5 438 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 TRIM64BA6NI03 449 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 H3BMQ9 156 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 DLGAP1O14490 977 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 ANGPT2O15123 496 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 ESRRBO95718 433 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 USP17L7P0C7H9 530 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 HDCP19113 662 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 ARNTP27540 789 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 CYP2C18P33260 490 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 GATMP50440 423 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 CCT8P50990 548 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 SLC5A3P53794 718 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 C21orf59P57076 290 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 SLC14A2Q15849 920 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 MOGQ16653 247 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 PPP1R3AQ16821 1122 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 BTBD8Q5XKL5 378 aa11.19□□□□□ -0.62
ATF3-211ENST00000613954 HFE2Q6ZVN8 426 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms