RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 RASA2Q15283 850 aa11.44□□□□□ -0.58
SLIRP-212ENST00000613856 LONRF1Q17RB8 773 aa11.44□□□□□ -0.58
SLIRP-212ENST00000613856 ARSIQ5FYB1 569 aa11.44□□□□□ -0.58
SLIRP-212ENST00000613856 EMC10Q5UCC4 262 aa11.44□□□□□ -0.58
SLIRP-212ENST00000613856 C19orf48Q6RUI8 117 aa11.44□□□□□ -0.58
SLIRP-212ENST00000613856 USP45Q70EL2 814 aa11.44□□□□□ -0.58
SLIRP-212ENST00000613856 GLT6D1Q7Z4J2 308 aa11.44□□□□□ -0.58
SLIRP-212ENST00000613856 TDRPQ86YL5 185 aa11.44□□□□□ -0.58
SLIRP-212ENST00000613856 CNPY4Q8N129 248 aa11.44□□□□□ -0.58
SLIRP-212ENST00000613856 STK40Q8N2I9 435 aa11.44□□□□□ -0.58
SLIRP-212ENST00000613856 SYNPOQ8N3V7 929 aa11.44□□□□□ -0.58
SLIRP-212ENST00000613856 RIBC1Q8N443 379 aaPredicted RBP11.44□□□□□ -0.58
SLIRP-212ENST00000613856 TTC30BQ8N4P2 665 aa11.44□□□□□ -0.58
SLIRP-212ENST00000613856 STYXQ8WUJ0 223 aa11.44□□□□□ -0.58
SLIRP-212ENST00000613856 MFSD3Q96ES6 412 aa11.44□□□□□ -0.58
SLIRP-212ENST00000613856 SCRN2Q96FV2 425 aa11.44□□□□□ -0.58
SLIRP-212ENST00000613856 CERS2Q96G23 380 aa11.44□□□□□ -0.58
SLIRP-212ENST00000613856 PPP1R16AQ96I34 528 aa11.44□□□□□ -0.58
SLIRP-212ENST00000613856 KLHL32Q96NJ5 620 aa11.44□□□□□ -0.58
SLIRP-212ENST00000613856 FCRL3Q96P31 734 aaPredicted RBP11.44□□□□□ -0.58
SLIRP-212ENST00000613856 FAM129BQ96TA1 746 aa11.44□□□□□ -0.58
SLIRP-212ENST00000613856 SH3GL2Q99962 352 aa11.44□□□□□ -0.58
SLIRP-212ENST00000613856 ZNF711Q9Y462 761 aa11.44□□□□□ -0.58
SLIRP-212ENST00000613856 CEP192Q8TEP8 1941 aa11.44□□□□□ -0.58
SLIRP-212ENST00000613856 GON4LQ3T8J9 2241 aa11.44□□□□□ -0.58
SLIRP-212ENST00000613856 PLXNB3Q9ULL4 1909 aa11.43□□□□□ -0.58
SLIRP-212ENST00000613856 PLXNA2O75051 1894 aa11.43□□□□□ -0.58
SLIRP-212ENST00000613856 EXOC1LA0A1B0GW35 172 aa11.43□□□□□ -0.58
SLIRP-212ENST00000613856 C2orf81A6NN90 581 aa11.43□□□□□ -0.58
SLIRP-212ENST00000613856 UPK3BL1B0FP48 263 aa11.43□□□□□ -0.58
SLIRP-212ENST00000613856 UPK3BL2E5RIL1 263 aa11.43□□□□□ -0.58
SLIRP-212ENST00000613856 AGPSO00116 658 aa11.43□□□□□ -0.58
SLIRP-212ENST00000613856 LPOP22079 712 aaPredicted RBP11.43□□□□□ -0.58
SLIRP-212ENST00000613856 SLC8A1P32418 973 aa11.43□□□□□ -0.58
SLIRP-212ENST00000613856 TIE1P35590 1138 aa11.43□□□□□ -0.58
SLIRP-212ENST00000613856 SEC13P55735 322 aa11.43□□□□□ -0.58
SLIRP-212ENST00000613856 MGAT5Q09328 741 aa11.43□□□□□ -0.58
SLIRP-212ENST00000613856 STARD3Q14849 445 aa11.43□□□□□ -0.58
SLIRP-212ENST00000613856 CDKN3Q16667 212 aa11.43□□□□□ -0.58
SLIRP-212ENST00000613856 SKIDA1Q1XH10 827 aa11.43□□□□□ -0.58
SLIRP-212ENST00000613856 CEP85LQ5SZL2 805 aa11.43□□□□□ -0.58
SLIRP-212ENST00000613856 PDPK2PQ6A1A2 396 aa11.43□□□□□ -0.58
SLIRP-212ENST00000613856 ESRP1Q6NXG1 681 aaKnown RBP11.43□□□□□ -0.58
SLIRP-212ENST00000613856 TRMT10BQ6PF06 316 aaKnown RBP11.43□□□□□ -0.58
SLIRP-212ENST00000613856 MARK2Q7KZI7 788 aaKnown RBP11.43□□□□□ -0.58
SLIRP-212ENST00000613856 PAF1Q8N7H5 531 aa11.43□□□□□ -0.58
SLIRP-212ENST00000613856 FRMD1Q8N878 549 aa11.43□□□□□ -0.58
SLIRP-212ENST00000613856 IL17RCQ8NAC3 791 aa11.43□□□□□ -0.58
SLIRP-212ENST00000613856 MDGA1Q8NFP4 955 aa11.43□□□□□ -0.58
SLIRP-212ENST00000613856 OR13J1Q8NGT2 312 aa11.43□□□□□ -0.58
SLIRP-212ENST00000613856 OR2W6PQ8NHA6 318 aa11.43□□□□□ -0.58
SLIRP-212ENST00000613856 UHMK1Q8TAS1 419 aaKnown RBP11.43□□□□□ -0.58
SLIRP-212ENST00000613856 PIP4K2CQ8TBX8 421 aa11.43□□□□□ -0.58
SLIRP-212ENST00000613856 ZNF778Q96MU6 729 aa11.43□□□□□ -0.58
SLIRP-212ENST00000613856 DHRS4Q9BTZ2 278 aa11.43□□□□□ -0.58
SLIRP-212ENST00000613856 RSPH9Q9H1X1 276 aaPredicted RBP11.43□□□□□ -0.58
SLIRP-212ENST00000613856 TMEM9BQ9NQ34 198 aa11.43□□□□□ -0.58
SLIRP-212ENST00000613856 EURLQ9NYK6 297 aa11.43□□□□□ -0.58
SLIRP-212ENST00000613856 VPS18Q9P253 973 aa11.43□□□□□ -0.58
SLIRP-212ENST00000613856 SLC24A2Q9UI40 661 aa11.43□□□□□ -0.58
SLIRP-212ENST00000613856 ARL5AQ9Y689 179 aa11.43□□□□□ -0.58
SLIRP-212ENST00000613856 LRRK1Q38SD2 2015 aa11.43□□□□□ -0.58
SLIRP-212ENST00000613856 H7C0S8 307 aa11.42□□□□□ -0.58
SLIRP-212ENST00000613856 RASGRF2O14827 1237 aa11.42□□□□□ -0.58
SLIRP-212ENST00000613856 SLC7A4O43246 635 aa11.42□□□□□ -0.58
SLIRP-212ENST00000613856 OPA1O60313 960 aa11.42□□□□□ -0.58
SLIRP-212ENST00000613856 CDH16O75309 829 aa11.42□□□□□ -0.58
SLIRP-212ENST00000613856 ADH1BP00325 375 aa11.42□□□□□ -0.58
SLIRP-212ENST00000613856 CAPNS1P04632 268 aa11.42□□□□□ -0.58
SLIRP-212ENST00000613856 ALPIP09923 528 aa11.42□□□□□ -0.58
SLIRP-212ENST00000613856 PIRTP0C851 137 aa11.42□□□□□ -0.58
SLIRP-212ENST00000613856 CYP2A6P11509 494 aaPredicted RBP11.42□□□□□ -0.58
SLIRP-212ENST00000613856 CEACAM1P13688 526 aa11.42□□□□□ -0.58
SLIRP-212ENST00000613856 ZNF30P17039 623 aa11.42□□□□□ -0.58
SLIRP-212ENST00000613856 CTPS1P17812 591 aa11.42□□□□□ -0.58
SLIRP-212ENST00000613856 ARNTP27540 789 aa11.42□□□□□ -0.58
SLIRP-212ENST00000613856 HNF1BP35680 557 aa11.42□□□□□ -0.58
SLIRP-212ENST00000613856 HMGCLP35914 325 aa11.42□□□□□ -0.58
SLIRP-212ENST00000613856 ARCN1P48444 511 aaKnown RBP11.42□□□□□ -0.58
SLIRP-212ENST00000613856 FAM193AP78312 1265 aa11.42□□□□□ -0.58
SLIRP-212ENST00000613856 CNGA3Q16281 694 aa11.42□□□□□ -0.58
SLIRP-212ENST00000613856 UGP2Q16851 508 aa11.42□□□□□ -0.58
SLIRP-212ENST00000613856 KRT71Q3SY84 523 aa11.42□□□□□ -0.58
SLIRP-212ENST00000613856 KBTBD12Q3ZCT8 623 aa11.42□□□□□ -0.58
SLIRP-212ENST00000613856 SOWAHCQ53LP3 525 aaPredicted RBP11.42□□□□□ -0.58
SLIRP-212ENST00000613856 FAM46CQ5VWP2 391 aa11.42□□□□□ -0.58
SLIRP-212ENST00000613856 PMS2CLQ68D20 193 aa11.42□□□□□ -0.58
SLIRP-212ENST00000613856 SDE2Q6IQ49 451 aa11.42□□□□□ -0.58
SLIRP-212ENST00000613856 CES3Q6UWW8 571 aa11.42□□□□□ -0.58
SLIRP-212ENST00000613856 PARS2Q7L3T8 475 aaKnown RBP11.42□□□□□ -0.58
SLIRP-212ENST00000613856 KCNMB4Q86W47 210 aa11.42□□□□□ -0.58
SLIRP-212ENST00000613856 LRRC6Q86X45 466 aa11.42□□□□□ -0.58
SLIRP-212ENST00000613856 CNTN4Q8IWV2 1026 aa11.42□□□□□ -0.58
SLIRP-212ENST00000613856 LMNTD2Q8IXW0 634 aa11.42□□□□□ -0.58
SLIRP-212ENST00000613856 OR2T3Q8NH03 318 aa11.42□□□□□ -0.58
SLIRP-212ENST00000613856 EPS8L3Q8TE67 593 aaKnown RBP11.42□□□□□ -0.58
SLIRP-212ENST00000613856 SLC44A1Q8WWI5 657 aa11.42□□□□□ -0.58
SLIRP-212ENST00000613856 CDKL2Q92772 493 aa11.42□□□□□ -0.58
SLIRP-212ENST00000613856 DNAJC1Q96KC8 554 aaKnown RBP11.42□□□□□ -0.58
SLIRP-212ENST00000613856 SMIM14Q96QK8 99 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms