RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 ADRM1Q16186 407 aa16.48■□□□□ 0.23
CNOT3-208ENST00000613073 FNDC1Q4ZHG4 1894 aaPredicted RBP16.48■□□□□ 0.23
CNOT3-208ENST00000613073 SPOUT1Q5T280 376 aaKnown RBP16.48■□□□□ 0.23
CNOT3-208ENST00000613073 BNC2Q6ZN30 1099 aaPredicted RBP16.48■□□□□ 0.23
CNOT3-208ENST00000613073 KCTD4Q8WVF5 259 aa16.48■□□□□ 0.23
CNOT3-208ENST00000613073 RCN3Q96D15 328 aa16.48■□□□□ 0.23
CNOT3-208ENST00000613073 BIRC8Q96P09 236 aa16.48■□□□□ 0.23
CNOT3-208ENST00000613073 ZNHIT2Q9UHR6 403 aa16.48■□□□□ 0.23
CNOT3-208ENST00000613073 A0A1W2PPW3 197 aa16.48■□□□□ 0.23
CNOT3-208ENST00000613073 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.48■□□□□ 0.23
CNOT3-208ENST00000613073 G3V2L1 256 aa16.48■□□□□ 0.23
CNOT3-208ENST00000613073 SEC24DO94855 1032 aaPredicted RBP16.48■□□□□ 0.23
CNOT3-208ENST00000613073 ATE1O95260 518 aa16.48■□□□□ 0.23
CNOT3-208ENST00000613073 ZDHHC11BP0C7U3 371 aa16.48■□□□□ 0.23
CNOT3-208ENST00000613073 ATP5C1P36542 298 aaKnown RBP16.48■□□□□ 0.23
CNOT3-208ENST00000613073 ALDH3B2P48448 385 aa16.48■□□□□ 0.23
CNOT3-208ENST00000613073 C21orf59P57076 290 aa16.48■□□□□ 0.23
CNOT3-208ENST00000613073 SERINC3Q13530 473 aa16.48■□□□□ 0.23
CNOT3-208ENST00000613073 IL23RQ5VWK5 629 aa16.48■□□□□ 0.23
CNOT3-208ENST00000613073 GPR141Q7Z602 305 aa16.48■□□□□ 0.23
CNOT3-208ENST00000613073 CEP97Q8IW35 865 aa16.48■□□□□ 0.23
CNOT3-208ENST00000613073 TMA16Q96EY4 203 aaKnown RBP16.48■□□□□ 0.23
CNOT3-208ENST00000613073 RMND5BQ96G75 393 aaPredicted RBP16.48■□□□□ 0.23
CNOT3-208ENST00000613073 SCYL1Q96KG9 808 aa16.48■□□□□ 0.23
CNOT3-208ENST00000613073 NEURL2Q9BR09 285 aa16.48■□□□□ 0.23
CNOT3-208ENST00000613073 GKN1Q9NS71 199 aa16.48■□□□□ 0.23
CNOT3-208ENST00000613073 TREX1Q9NSU2 369 aa16.48■□□□□ 0.23
CNOT3-208ENST00000613073 FNIP2Q9P278 1114 aa16.48■□□□□ 0.23
CNOT3-208ENST00000613073 RUVBL2Q9Y230 463 aaKnown RBP16.48■□□□□ 0.23
CNOT3-208ENST00000613073 MYRFQ9Y2G1 1151 aa16.48■□□□□ 0.23
CNOT3-208ENST00000613073 F5H5T6 163 aa16.47■□□□□ 0.23
CNOT3-208ENST00000613073 SCAMP3O14828 347 aaKnown RBP16.47■□□□□ 0.23
CNOT3-208ENST00000613073 MUSKO15146 869 aa16.47■□□□□ 0.23
CNOT3-208ENST00000613073 SEC24AO95486 1093 aa16.47■□□□□ 0.23
CNOT3-208ENST00000613073 CD247P20963 164 aa16.47■□□□□ 0.23
CNOT3-208ENST00000613073 SERPINH1P50454 418 aaKnown RBP16.47■□□□□ 0.23
CNOT3-208ENST00000613073 ABCE1P61221 599 aaKnown RBP16.47■□□□□ 0.23
CNOT3-208ENST00000613073 ZNF789Q5FWF6 425 aa16.47■□□□□ 0.23
CNOT3-208ENST00000613073 NANOGP8Q6NSW7 305 aa16.47■□□□□ 0.23
CNOT3-208ENST00000613073 CCDC80Q76M96 950 aa16.47■□□□□ 0.23
CNOT3-208ENST00000613073 DENND1CQ8IV53 801 aa16.47■□□□□ 0.23
CNOT3-208ENST00000613073 SLC7A5P1Q8MH63 180 aa16.47■□□□□ 0.23
CNOT3-208ENST00000613073 ZNF781Q8N8C0 355 aa16.47■□□□□ 0.23
CNOT3-208ENST00000613073 DDHD1Q8NEL9 900 aa16.47■□□□□ 0.23
CNOT3-208ENST00000613073 OR52K2Q8NGK3 314 aa16.47■□□□□ 0.23
CNOT3-208ENST00000613073 PLEKHA8Q96JA3 519 aa16.47■□□□□ 0.23
CNOT3-208ENST00000613073 PPP1R2P1Q96PQ5 205 aa16.47■□□□□ 0.23
CNOT3-208ENST00000613073 SERPINI1Q99574 410 aa16.47■□□□□ 0.23
CNOT3-208ENST00000613073 SEMA3CQ99985 751 aa16.47■□□□□ 0.23
CNOT3-208ENST00000613073 NSMCE4AQ9NXX6 385 aa16.47■□□□□ 0.23
CNOT3-208ENST00000613073 FAM95CA0A1B0GW59 222 aa16.47■□□□□ 0.23
CNOT3-208ENST00000613073 SLC35E2BP0CK96 405 aa16.47■□□□□ 0.23
CNOT3-208ENST00000613073 RPS24P62847 133 aaKnown RBP16.47■□□□□ 0.23
CNOT3-208ENST00000613073 TLE2Q04725 743 aa16.47■□□□□ 0.23
CNOT3-208ENST00000613073 RING1Q06587 406 aa16.47■□□□□ 0.23
CNOT3-208ENST00000613073 SMARCB1Q12824 385 aa16.47■□□□□ 0.23
CNOT3-208ENST00000613073 BNIP3Q12983 259 aa16.47■□□□□ 0.23
CNOT3-208ENST00000613073 C17orf50Q8WW18 174 aa16.47■□□□□ 0.23
CNOT3-208ENST00000613073 ELMO2Q96JJ3 720 aa16.47■□□□□ 0.23
CNOT3-208ENST00000613073 RTKNQ9BST9 563 aa16.47■□□□□ 0.23
CNOT3-208ENST00000613073 PAK6Q9NQU5 681 aaPredicted RBP16.47■□□□□ 0.23
CNOT3-208ENST00000613073 DNMT3LQ9UJW3 386 aa16.47■□□□□ 0.23
CNOT3-208ENST00000613073 ZNF195O14628 629 aa16.46■□□□□ 0.23
CNOT3-208ENST00000613073 GIPC1O14908 333 aa16.46■□□□□ 0.23
CNOT3-208ENST00000613073 IRF1P10914 325 aa16.46■□□□□ 0.23
CNOT3-208ENST00000613073 ZNF26P17031 533 aaPredicted RBP16.46■□□□□ 0.23
CNOT3-208ENST00000613073 PAMP19021 973 aa16.46■□□□□ 0.23
CNOT3-208ENST00000613073 UGT1A6P19224 532 aa16.46■□□□□ 0.23
CNOT3-208ENST00000613073 UGT1A1P22309 533 aa16.46■□□□□ 0.23
CNOT3-208ENST00000613073 UGT1A4P22310 534 aa16.46■□□□□ 0.23
CNOT3-208ENST00000613073 GRK2P25098 689 aa16.46■□□□□ 0.23
CNOT3-208ENST00000613073 UGT1A3P35503 534 aa16.46■□□□□ 0.23
CNOT3-208ENST00000613073 UGT1A5P35504 534 aa16.46■□□□□ 0.23
CNOT3-208ENST00000613073 DPP6P42658 865 aa16.46■□□□□ 0.23
CNOT3-208ENST00000613073 TRIM60Q495X7 471 aa16.46■□□□□ 0.23
CNOT3-208ENST00000613073 SLC8B1Q6J4K2 584 aa16.46■□□□□ 0.23
CNOT3-208ENST00000613073 NEPROQ6NW34 567 aa16.46■□□□□ 0.23
CNOT3-208ENST00000613073 CNSTQ6PJW8 725 aa16.46■□□□□ 0.23
CNOT3-208ENST00000613073 SLC2A7Q6PXP3 512 aa16.46■□□□□ 0.23
CNOT3-208ENST00000613073 LDB1Q86U70 411 aaPredicted RBP16.46■□□□□ 0.23
CNOT3-208ENST00000613073 OR7D4Q8NG98 312 aa16.46■□□□□ 0.23
CNOT3-208ENST00000613073 ARRDC2Q8TBH0 407 aa16.46■□□□□ 0.23
CNOT3-208ENST00000613073 PDCD6IPQ8WUM4 868 aaKnown RBP16.46■□□□□ 0.23
CNOT3-208ENST00000613073 SPON2Q9BUD6 331 aa16.46■□□□□ 0.23
CNOT3-208ENST00000613073 KCTD3Q9Y597 815 aa16.46■□□□□ 0.23
CNOT3-208ENST00000613073 ZFP37Q9Y6Q3 630 aaPredicted RBP16.46■□□□□ 0.23
CNOT3-208ENST00000613073 H3BNH8 94 aa16.46■□□□□ 0.23
CNOT3-208ENST00000613073 HMOX2P30519 316 aa16.46■□□□□ 0.23
CNOT3-208ENST00000613073 ZNF423Q2M1K9 1284 aa16.46■□□□□ 0.23
CNOT3-208ENST00000613073 PARP15Q460N3 678 aa16.46■□□□□ 0.23
CNOT3-208ENST00000613073 SIRPB2Q5JXA9 342 aa16.46■□□□□ 0.23
CNOT3-208ENST00000613073 TMEM214Q6NUQ4 689 aaKnown RBP16.46■□□□□ 0.23
CNOT3-208ENST00000613073 DHRS4L2Q6PKH6 230 aa16.46■□□□□ 0.23
CNOT3-208ENST00000613073 CNTN4Q8IWV2 1026 aa16.46■□□□□ 0.23
CNOT3-208ENST00000613073 FAM47BQ8NA70 645 aa16.46■□□□□ 0.23
CNOT3-208ENST00000613073 KYQ8NBH2 561 aa16.46■□□□□ 0.23
CNOT3-208ENST00000613073 TTC16Q8NEE8 873 aa16.46■□□□□ 0.23
CNOT3-208ENST00000613073 LRTOMTQ8WZ04 291 aa16.46■□□□□ 0.23
CNOT3-208ENST00000613073 SLC29A1Q99808 456 aa16.46■□□□□ 0.23
CNOT3-208ENST00000613073 CIB1Q99828 191 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms