RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 ADAMTSL4Q6UY14 1074 aa12.29□□□□□ -0.44
CBWD3-208ENST00000612050 KDM7AQ6ZMT4 941 aa12.29□□□□□ -0.44
CBWD3-208ENST00000612050 EFL1Q7Z2Z2 1120 aaKnown RBP12.29□□□□□ -0.44
CBWD3-208ENST00000612050 KDELC2Q7Z4H8 507 aa12.29□□□□□ -0.44
CBWD3-208ENST00000612050 CACTIN-AS1Q8N1I8 211 aa12.29□□□□□ -0.44
CBWD3-208ENST00000612050 CNTD1Q8N815 330 aa12.29□□□□□ -0.44
CBWD3-208ENST00000612050 FAM46DQ8NEK8 389 aa12.29□□□□□ -0.44
CBWD3-208ENST00000612050 PDXPQ96GD0 296 aa12.29□□□□□ -0.44
CBWD3-208ENST00000612050 HIC2Q96JB3 615 aa12.29□□□□□ -0.44
CBWD3-208ENST00000612050 NSMCE3Q96MG7 304 aa12.29□□□□□ -0.44
CBWD3-208ENST00000612050 DESI2Q9BSY9 194 aa12.29□□□□□ -0.44
CBWD3-208ENST00000612050 BOCQ9BWV1 1114 aa12.29□□□□□ -0.44
CBWD3-208ENST00000612050 LACRTQ9GZZ8 138 aa12.29□□□□□ -0.44
CBWD3-208ENST00000612050 ABCG8Q9H221 673 aa12.29□□□□□ -0.44
CBWD3-208ENST00000612050 TCEAL2Q9H3H9 227 aaPredicted RBP12.29□□□□□ -0.44
CBWD3-208ENST00000612050 DPEP2Q9H4A9 486 aa12.29□□□□□ -0.44
CBWD3-208ENST00000612050 FAM83DQ9H4H8 585 aa12.29□□□□□ -0.44
CBWD3-208ENST00000612050 SUDS3Q9H7L9 328 aaPredicted RBP12.29□□□□□ -0.44
CBWD3-208ENST00000612050 MAGEE1Q9HCI5 957 aa12.29□□□□□ -0.44
CBWD3-208ENST00000612050 HACD3Q9P035 362 aa12.29□□□□□ -0.44
CBWD3-208ENST00000612050 SIRPGQ9P1W8 387 aa12.29□□□□□ -0.44
CBWD3-208ENST00000612050 PADI4Q9UM07 663 aa12.29□□□□□ -0.44
CBWD3-208ENST00000612050 AK5Q9Y6K8 562 aa12.29□□□□□ -0.44
CBWD3-208ENST00000612050 DUSP10Q9Y6W6 482 aa12.29□□□□□ -0.44
CBWD3-208ENST00000612050 NCOR2Q9Y618 2525 aa12.29□□□□□ -0.44
CBWD3-208ENST00000612050 GRID2IPA4D2P6 1211 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 EME2A4GXA9 379 aaPredicted RBP12.28□□□□□ -0.44
CBWD3-208ENST00000612050 FAM149AA5PLN7 773 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 RCCD1A6NED2 376 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 GCATO75600 419 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 CCDC175P0C221 793 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 GNPDA1P46926 289 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 MARCKSL1P49006 195 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 SPINT3P49223 89 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 GEMP55040 296 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 EIF3EP60228 445 aaKnown RBP12.28□□□□□ -0.44
CBWD3-208ENST00000612050 PTSQ03393 145 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 NOMO1Q15155 1222 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 TCEA2Q15560 299 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 ZDHHC20Q5W0Z9 365 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 DOK6Q6PKX4 331 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 TECPR1Q7Z6L1 1165 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 GALNT13Q8IUC8 556 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 KDF1Q8NAX2 398 aaPredicted RBP12.28□□□□□ -0.44
CBWD3-208ENST00000612050 OR1E3Q8WZA6 343 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 GRAMD1AQ96CP6 724 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 TRABDQ9H4I3 376 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 FGF22Q9HCT0 170 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 TRNAU1APQ9NX07 287 aaKnown RBP12.28□□□□□ -0.44
CBWD3-208ENST00000612050 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.28□□□□□ -0.44
CBWD3-208ENST00000612050 AAR2Q9Y312 384 aaKnown RBP12.28□□□□□ -0.44
CBWD3-208ENST00000612050 REXO2Q9Y3B8 237 aaKnown RBP12.28□□□□□ -0.44
CBWD3-208ENST00000612050 OPA1O60313 960 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 MT-CYBP00156 380 aaPredicted RBP12.28□□□□□ -0.44
CBWD3-208ENST00000612050 MT-CO3P00414 261 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 PRLP01236 227 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 EPOP01588 193 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 IVLP07476 585 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 MMP2P08253 660 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 GIMD1P0DJR0 217 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 RBP3P10745 1247 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 GM2AP17900 193 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 NFKB1P19838 968 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 HLA-DPA1P20036 260 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 ACTN2P35609 894 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 INSM1Q01101 510 aaPredicted RBP12.28□□□□□ -0.44
CBWD3-208ENST00000612050 OTUD4Q01804 1114 aaKnown RBP12.28□□□□□ -0.44
CBWD3-208ENST00000612050 TARDBPQ13148 414 aaKnown RBP eCLIP12.28□□□□□ -0.44
CBWD3-208ENST00000612050 SPIDRQ14159 915 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 ZNF569Q5MCW4 686 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 PDPK2PQ6A1A2 396 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 TMEM139Q8IV31 216 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 CBARPQ8N350 705 aaPredicted RBP12.28□□□□□ -0.44
CBWD3-208ENST00000612050 SPATA22Q8NHS9 363 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 ACTL9Q8TC94 416 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 OR2M4Q96R27 311 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 FCRL5Q96RD9 977 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 ZSCAN5AQ9BUG6 496 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 RIOK2Q9BVS4 552 aaKnown RBP12.28□□□□□ -0.44
CBWD3-208ENST00000612050 LGR4Q9BXB1 951 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 SPATA16Q9BXB7 569 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 NRSN2Q9GZP1 204 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 CLPBQ9H078 707 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 STN1Q9H668 368 aaKnown RBP12.28□□□□□ -0.44
CBWD3-208ENST00000612050 RMI1Q9H9A7 625 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 MRPL40Q9NQ50 206 aaKnown RBP12.28□□□□□ -0.44
CBWD3-208ENST00000612050 UBP1Q9NZI7 540 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 ZMIZ1Q9ULJ6 1067 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 GUCA1BQ9UMX6 200 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 ZNF711Q9Y462 761 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 GPSM3Q9Y4H4 160 aa12.28□□□□□ -0.44
CBWD3-208ENST00000612050 LRP4O75096 1905 aa12.27□□□□□ -0.44
CBWD3-208ENST00000612050 TRABD2BA6NFA1 517 aa12.27□□□□□ -0.45
CBWD3-208ENST00000612050 B4DGG1 531 aa12.27□□□□□ -0.45
CBWD3-208ENST00000612050 TMX2-CTNND1H3BSU7 103 aa12.27□□□□□ -0.45
CBWD3-208ENST00000612050 INPP4BO15327 924 aa12.27□□□□□ -0.45
CBWD3-208ENST00000612050 KCNN4O15554 427 aa12.27□□□□□ -0.45
CBWD3-208ENST00000612050 TCEA3O75764 348 aa12.27□□□□□ -0.45
CBWD3-208ENST00000612050 FTCDO95954 541 aa12.27□□□□□ -0.45
CBWD3-208ENST00000612050 SLC2A4P14672 509 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms