RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 RNF25Q96BH1 459 aaPredicted RBP19.24■□□□□ 0.67
SGMS1-208ENST00000608287 ECHDC3Q96DC8 303 aa19.24■□□□□ 0.67
SGMS1-208ENST00000608287 NSMCE3Q96MG7 304 aa19.24■□□□□ 0.67
SGMS1-208ENST00000608287 ZNF830Q96NB3 372 aaPredicted RBP19.24■□□□□ 0.67
SGMS1-208ENST00000608287 CATSPER2Q96P56 530 aa19.24■□□□□ 0.67
SGMS1-208ENST00000608287 KLF6Q99612 283 aaPredicted RBP19.24■□□□□ 0.67
SGMS1-208ENST00000608287 BAG1Q99933 345 aaPredicted RBP19.24■□□□□ 0.67
SGMS1-208ENST00000608287 LRRC61Q9BV99 259 aa19.24■□□□□ 0.67
SGMS1-208ENST00000608287 GOLPH3Q9H4A6 298 aa19.24■□□□□ 0.67
SGMS1-208ENST00000608287 NOD2Q9HC29 1040 aa19.24■□□□□ 0.67
SGMS1-208ENST00000608287 DTLQ9NZJ0 730 aa19.24■□□□□ 0.67
SGMS1-208ENST00000608287 ATP8A1Q9Y2Q0 1164 aa19.24■□□□□ 0.67
SGMS1-208ENST00000608287 ALG6Q9Y672 507 aa19.24■□□□□ 0.67
SGMS1-208ENST00000608287 NBASA2RRP1 2371 aa19.24■□□□□ 0.67
SGMS1-208ENST00000608287 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.23■□□□□ 0.67
SGMS1-208ENST00000608287 MATN3O15232 486 aa19.23■□□□□ 0.67
SGMS1-208ENST00000608287 CCNCP24863 283 aa19.23■□□□□ 0.67
SGMS1-208ENST00000608287 CCR10P46092 362 aa19.23■□□□□ 0.67
SGMS1-208ENST00000608287 POLR2LP62875 67 aaKnown RBP19.23■□□□□ 0.67
SGMS1-208ENST00000608287 PPARDQ03181 441 aa19.23■□□□□ 0.67
SGMS1-208ENST00000608287 SLC10A2Q12908 348 aaPredicted RBP19.23■□□□□ 0.67
SGMS1-208ENST00000608287 SRSF6Q13247 344 aaKnown RBP19.23■□□□□ 0.67
SGMS1-208ENST00000608287 CLCA4Q14CN2 919 aa19.23■□□□□ 0.67
SGMS1-208ENST00000608287 ATCAYQ86WG3 371 aa19.23■□□□□ 0.67
SGMS1-208ENST00000608287 VSIG1Q86XK7 387 aa19.23■□□□□ 0.67
SGMS1-208ENST00000608287 DTX1Q86Y01 620 aa19.23■□□□□ 0.67
SGMS1-208ENST00000608287 PTRH1Q86Y79 214 aaKnown RBP19.23■□□□□ 0.67
SGMS1-208ENST00000608287 RFX6Q8HWS3 928 aa19.23■□□□□ 0.67
SGMS1-208ENST00000608287 RBFAQ8N0V3 343 aa19.23■□□□□ 0.67
SGMS1-208ENST00000608287 TEX26Q8N6G2 289 aa19.23■□□□□ 0.67
SGMS1-208ENST00000608287 CCNYQ8ND76 341 aa19.23■□□□□ 0.67
SGMS1-208ENST00000608287 GPBAR1Q8TDU6 330 aa19.23■□□□□ 0.67
SGMS1-208ENST00000608287 PDCD6IPQ8WUM4 868 aaKnown RBP19.23■□□□□ 0.67
SGMS1-208ENST00000608287 CCDC74AQ96AQ1 378 aa19.23■□□□□ 0.67
SGMS1-208ENST00000608287 TSGA13Q96PP4 275 aa19.23■□□□□ 0.67
SGMS1-208ENST00000608287 FOXP3Q9BZS1 431 aa19.23■□□□□ 0.67
SGMS1-208ENST00000608287 IMPACTQ9P2X3 320 aa19.23■□□□□ 0.67
SGMS1-208ENST00000608287 GULP1Q9UBP9 304 aa19.23■□□□□ 0.67
SGMS1-208ENST00000608287 COQ6Q9Y2Z9 468 aa19.23■□□□□ 0.67
SGMS1-208ENST00000608287 PCDHGC4Q9Y5F7 938 aa19.23■□□□□ 0.67
SGMS1-208ENST00000608287 HEY1Q9Y5J3 304 aa19.23■□□□□ 0.67
SGMS1-208ENST00000608287 CREBBPQ92793 2442 aa19.23■□□□□ 0.67
SGMS1-208ENST00000608287 PRAMEF33A0A0G2JMD5 474 aa19.22■□□□□ 0.67
SGMS1-208ENST00000608287 RCCD1A6NED2 376 aa19.22■□□□□ 0.67
SGMS1-208ENST00000608287 STMND1H3BQB6 276 aa19.22■□□□□ 0.67
SGMS1-208ENST00000608287 TRAFD1O14545 582 aaPredicted RBP19.22■□□□□ 0.67
SGMS1-208ENST00000608287 APOL1O14791 398 aa19.22■□□□□ 0.67
SGMS1-208ENST00000608287 YY2O15391 372 aa19.22■□□□□ 0.67
SGMS1-208ENST00000608287 PRAMEF10O60809 474 aa19.22■□□□□ 0.67
SGMS1-208ENST00000608287 GCATO75600 419 aa19.22■□□□□ 0.67
SGMS1-208ENST00000608287 HGFP14210 728 aa19.22■□□□□ 0.67
SGMS1-208ENST00000608287 MMP12P39900 470 aa19.22■□□□□ 0.67
SGMS1-208ENST00000608287 LIG3P49916 1009 aa19.22■□□□□ 0.67
SGMS1-208ENST00000608287 POLE2P56282 527 aa19.22■□□□□ 0.67
SGMS1-208ENST00000608287 SKIDA1Q1XH10 827 aa19.22■□□□□ 0.67
SGMS1-208ENST00000608287 SLC9A4Q6AI14 798 aa19.22■□□□□ 0.67
SGMS1-208ENST00000608287 MACC1Q6ZN28 852 aa19.22■□□□□ 0.67
SGMS1-208ENST00000608287 GKN2Q86XP6 184 aa19.22■□□□□ 0.67
SGMS1-208ENST00000608287 PLD5Q8N7P1 536 aa19.22■□□□□ 0.67
SGMS1-208ENST00000608287 MAML1Q92585 1016 aa19.22■□□□□ 0.67
SGMS1-208ENST00000608287 LRRN3Q9H3W5 708 aa19.22■□□□□ 0.67
SGMS1-208ENST00000608287 TTLL3Q9Y4R7 772 aa19.22■□□□□ 0.67
SGMS1-208ENST00000608287 BSNQ9UPA5 3926 aa19.21■□□□□ 0.67
SGMS1-208ENST00000608287 PSTPIP1O43586 416 aa19.21■□□□□ 0.67
SGMS1-208ENST00000608287 SOCS5O75159 536 aa19.21■□□□□ 0.67
SGMS1-208ENST00000608287 CCNB1P14635 433 aa19.21■□□□□ 0.67
SGMS1-208ENST00000608287 TSHRP16473 764 aa19.21■□□□□ 0.67
SGMS1-208ENST00000608287 ZFXP17010 805 aaPredicted RBP19.21■□□□□ 0.67
SGMS1-208ENST00000608287 NAP1L1P55209 391 aaKnown RBP19.21■□□□□ 0.67
SGMS1-208ENST00000608287 DYNLT1P63172 113 aa19.21■□□□□ 0.67
SGMS1-208ENST00000608287 C1orf61Q13536 156 aa19.21■□□□□ 0.67
SGMS1-208ENST00000608287 LRRK1Q38SD2 2015 aa19.21■□□□□ 0.67
SGMS1-208ENST00000608287 RALGPS1Q5JS13 557 aa19.21■□□□□ 0.67
SGMS1-208ENST00000608287 C11orf63Q6NUN7 778 aa19.21■□□□□ 0.67
SGMS1-208ENST00000608287 MFSD7Q6UXD7 560 aa19.21■□□□□ 0.67
SGMS1-208ENST00000608287 DAAM2Q86T65 1068 aa19.21■□□□□ 0.67
SGMS1-208ENST00000608287 CCDC13Q8IYE1 715 aa19.21■□□□□ 0.67
SGMS1-208ENST00000608287 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.21■□□□□ 0.67
SGMS1-208ENST00000608287 ACRBPQ8NEB7 543 aa19.21■□□□□ 0.67
SGMS1-208ENST00000608287 HTR3CQ8WXA8 447 aa19.21■□□□□ 0.67
SGMS1-208ENST00000608287 FATE1Q969F0 183 aa19.21■□□□□ 0.67
SGMS1-208ENST00000608287 CENPTQ96BT3 561 aa19.21■□□□□ 0.67
SGMS1-208ENST00000608287 HDAC11Q96DB2 347 aa19.21■□□□□ 0.67
SGMS1-208ENST00000608287 POLR1EQ9GZS1 481 aaKnown RBP19.21■□□□□ 0.67
SGMS1-208ENST00000608287 CAAP1Q9H8G2 361 aa19.21■□□□□ 0.67
SGMS1-208ENST00000608287 HAUS2Q9NVX0 235 aa19.21■□□□□ 0.67
SGMS1-208ENST00000608287 RBM22Q9NW64 420 aaKnown RBP eCLIP19.21■□□□□ 0.67
SGMS1-208ENST00000608287 REXO2Q9Y3B8 237 aaKnown RBP19.21■□□□□ 0.67
SGMS1-208ENST00000608287 UNC13CQ8NB66 2214 aa19.2■□□□□ 0.66
SGMS1-208ENST00000608287 A0A1W2PQ67 120 aa19.2■□□□□ 0.66
SGMS1-208ENST00000608287 BLACEA4D250 179 aa19.2■□□□□ 0.66
SGMS1-208ENST00000608287 GOLGA6L6A8MZA4 724 aa19.2■□□□□ 0.66
SGMS1-208ENST00000608287 HTRA2O43464 458 aaPredicted RBP19.2■□□□□ 0.66
SGMS1-208ENST00000608287 CPP00450 1065 aa19.2■□□□□ 0.66
SGMS1-208ENST00000608287 CTSEP14091 401 aa19.2■□□□□ 0.66
SGMS1-208ENST00000608287 IGFALSP35858 605 aa19.2■□□□□ 0.66
SGMS1-208ENST00000608287 CYP4F2P78329 520 aa19.2■□□□□ 0.66
SGMS1-208ENST00000608287 CCL7P80098 99 aa19.2■□□□□ 0.66
SGMS1-208ENST00000608287 TRAF2Q12933 501 aa19.2■□□□□ 0.66
SGMS1-208ENST00000608287 NPNTQ6UXI9 565 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms